Gadus morhua (Atlantic cod): 115537095
Help
Entry
115537095 CDS
T10832
Symbol
myom1
Name
(RefSeq) myomesin-1 isoform X1
KO
K24495
myomesin
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115537095 (myom1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gmh04990
]
115537095 (myom1)
Domain-containing proteins not elsewhere classified [BR:
gmh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
115537095 (myom1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
V-set
Pur_ac_phosph_N
Ig_CD22
C2-set_3
Motif
Other DBs
NCBI-GeneID:
115537095
NCBI-ProteinID:
XP_030204604
Ensembl:
ENSGMOG00000005713
LinkDB
All DBs
Position
23:10641940..10671506
Genome browser
AA seq
1811 aa
AA seq
DB search
MPGSLPFYQKHQRHYDHDYRSSETQALVSKYRASSRSSSGYPAHTCTSGGYPAHTCNSGY
APHICTGHGLTSARTSTSRGLTASSYSGLEQSSQLTKRAKATHLAVDREHHIIGYVVPIF
RGSREFAGGYSGVEDSRLKATSASMWGQDHFTSGLEMERSEVSSRKVTIRESAERISLSK
TIYENEEHSKRMNKDSLMHAPEFVIKPRSHTVWENQSVRLHCTLSGWPNPHVVWYKNNVT
IDPIAHPGKYKIESSYSVHSLEIDRCDFDDTAQYHVSAMNAKGEQSAYASVVVKRFKGEM
DTSAPSPRRSYPRVGQVSEYGITFKTHIVDTFGVSFGREGETMSLGCTVIIHPNLERYQP
GVEWYRDDVLLAPSKWHQMHWSGDRATLTLTHLNKEDEGLYTLRVTTKSGYETYSAYVFV
RDADAEVEGAPGAPLDVRCLDANKDYVIVSWKQPAVDGGNSILGYFVDRCEVGTNHWIQC
NDTPVKFARLPVTGLVEGRSYAFRVRAVNKSGMSRPSRTSEPVAAVDAADRARMRGTSAP
VTGQIIVTEEEPAEGVVPGKPLELEVTEATKNYVVLSWKPPGERGHEGIMYYVEKCVSGT
DSWQRVNTEIPVKSPRFALFDLAEGKSYSFRVRCCNSAGVGEPSPPTEATTVGDKLDVPA
APERVVATRNTATSVVVSWEKSRHAKDLVGYYIETSVVGSDTWEPCNNKPVPGSRFVCHG
LVTGETYVFKVRAVNAAGISMSSQESEPVLVKAAIGGGIPHGVLPEMGPGGNRGGLTQHG
PRWTDTHDTVQPPADTTMLRGNALTDTPTPTAKAEASVAANAKANANSVESQYPATKSPN
KGAKRGSVSWAPELESGSGSVSDVVSNTPLAAPITAPITAPITAAITPPITALITPPLAP
ACNGEEEAIGGSREPLEKRKFSVDATAQRPRRDSTASPAPPFGISVLECVRDSMVLGWKQ
PAFVGGSDIIGYFVDYREVFDGLEGQWHEANIQSVSDRAYRVCDLKENKKYQFQVRAANM
AGVGIPSLPSNTFLCEEWTIAVPGPPHDLQVTEVRSSSLVLLWKPPVYQGRDAVNGFYVD
IKEAGASEEAWRGINKKATDSKFIKIENLQEGEKYVFRVRAQNNAGVGNASEVTEPTLAE
TKAGTKEIMVDVDDDGVISLNFECSAMSAESKFVWSKNYEEISDTERIAVETKGSKAKAS
FLAPGEEDIGVYSCSVTHTDGASASYDLTAEELKKLLETSHDHKFPIIPLKSELAVELQE
KGRVRFWLQAEKISANGKVDYVFNDNSLSAGEKYKMNFDKNTGVIEMIMESLTPKDEGTF
TFQLQDGKATNQSSLVLIGDVFKALQKESEFQMKEWVRKQGPHFVEYLGFEVTPECCVIL
KCKVGNIKKDTVALWQKDGQEIKSDQQLSFTEGVLKLEIAQRGARAVAGTADTVDTVDDV
TWRQLKISKKDAGVYNIVLKDDRGKDTSTLNLTDQGFRDMMNEVFSVIANSSTALKITST
DEGIRLYTFVSYYNDLLQVTWHYKDSAISFSDRIKSGVVGEQLWLQIKEPTEKDTGKYAI
EFNDGKGGLRRTVELSGQAFDDAVAEFKRLKAAAIAERNRARVKGGLPDVVTIQEGKDLN
LTCNISGDPVPEVTWLKNEREIVSDDHLLLKFESGKFASFIITKVNSDDSGKYSILVKNK
FGTESGEFTLQVTQGPVDLGVTSYLTDQDGNVMVGPNTTPPKKRTPATAGTKQKPSDSPV
PKTPPPGKQVDGRENVEQVKETGKTVTEDTAETLPAPTATGTTPETPQHPDAELCDEAAS
PSGSPEETTAQ
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcccttccattctaccagaagcaccagcgccactacgaccacgactaccgc
agctccgagacccaggcgctggttagcaagtaccgcgctagcagcagaagcagtagcggc
tatcctgcccacacctgcaccagtggtggctatcctgcccacacatgtaacagtggctac
gcaccccacatctgtacgggccacggcctgaccagcgccagaaccagcaccagcaggggc
ctcacagcgtcttcctactctgggttggagcagagcagccagctgaccaagagagccaag
gccacacatcttgcggtggacagggaacaccacatcatcggctacgtagtgccgatcttc
aggggcagtcgggagtttgctggtggttattcgggtgtagaagattcacgcttgaaggcg
acgtctgcctccatgtggggtcaggatcattttacgagtgggctggagatggagaggtca
gaggtcagctccaggaaggtgaccatacgcgaatcagctgaacgcatctccctcagcaaa
acgatctatgaaaacgaggaacacagcaagagaatgaacaaggacagcctgatgcacgcg
ccagagtttgtgatcaaaccacgctcacacacggtgtgggagaaccagagtgtacgccta
cactgcaccctaagcggatggccaaacccacatgtggtgtggtacaaaaacaatgtgacc
atcgaccccattgcccacccgggcaaatataagatagagagcagctacagtgtccactcc
ctggagattgacagatgtgatttcgacgacacggcgcagtaccacgtgtctgccatgaac
gcaaagggggagcagtctgcttacgcctcggttgtggtcaagagatttaaaggagaaatg
gacacgtcagcaccttcacccagacggtcctatccacgagtgggccaggtgtctgagtac
ggcatcacctttaagacccacatcgtggacacgtttggcgtctccttcggccgggagggc
gagaccatgagcctgggctgcacggtcatcatccaccccaacctggagcgctaccagccc
ggcgtggagtggtaccgcgacgacgtgctgctggcgcccagcaagtggcatcagatgcac
tggagcggcgaccgcgccaccctgaccctcacgcacctcaacaaggaggacgagggcctg
tacaccctccgcgtcaccaccaagtccggatacgagacctactctgcctacgtctttgtc
agagatgcggatgcggaggtggaaggggcccctggggcccccctggacgtgcgctgtctg
gacgccaacaaagattacgtcattgtctcctggaagcagccggcggtggacggagggaac
tccatcctgggatactttgtggacaggtgtgaggttggaaccaaccactggatccagtgc
aacgacacccccgtcaagttcgcccgcctccccgtcaccgggctggtggaggggcggtcc
tacgccttccgcgtgcgggccgtcaacaagagcggcatgagccgcccgtcacgcacctct
gaacccgtggccgccgtggacgccgccgaccgcgcccgcatgagaggaacctcggccccc
gtgactggtcagatcatcgtgacggaggaggagccagcagagggcgtggttcccgggaaa
ccccttgagctggaggtgaccgaggcgaccaagaactacgtggtcctgagctggaagccc
cctggagagagaggtcacgagggcatcatgtactacgtggagaagtgtgtgtccgggacg
gacagctggcagagggtgaacacagagatcccggtgaagtccccccgcttcgcgctgttc
gacctggccgaggggaagtcctacagcttcagggttcgctgctgcaactcagccggggtg
ggggagccgtccccccccaccgaggccaccaccgtgggagacaagctggatgtcccagcc
gccccagagcgtgtggtggcgaccaggaacacagccacgtcggtggtggtctcctgggag
aagtcccgccatgccaaggacctggtgggctactacatagagaccagcgtggtgggcagc
gacacctgggaaccctgcaacaacaagcctgtaccagggtccaggttcgtgtgccatggc
ctggtgaccggcgagacctacgtgttcaaagtgagagcggtgaacgctgctggtattagc
atgagctctcaggagtctgagccagtcctggtcaaggccgctattgggggcggcattcct
cacggtgtgttgccggaaatggggccgggagggaacaggggcggactaacccagcacggg
ccacgctggacggacacgcatgacactgtccagccccccgctgacactaccatgctaagg
ggcaacgctctgactgacacgcccacgcccacggctaaagccgaggcgagcgtcgcggct
aatgctaaggctaatgctaactcagttgagtcccaatatcccgccactaagagtccaaac
aaaggcgcaaagcgaggcagcgtctcttgggcccccgaactggagtcgggatcaggttca
gtatcagacgtggtctcaaacacgcccctagcggcgcccataacggcgcccataacggct
ccaataacggcggccataacgccgccaataacggcgctcataaccccgcccctagcccca
gcctgcaatggtgaggaagaggccatagggggcagcagagagccgttagaaaagcgtaag
ttctctgtagacgccacggcacaaagacccaggagagactcgacagcctcccctgcgccc
ccgtttggcatcagcgtcctggagtgtgtccgggactccatggtgctggggtggaagcag
cccgcctttgtgggcggttcagatatcatcggctactttgtggactatcgcgaggtcttt
gacggcttggagggccagtggcacgaggccaacattcagtcggtcagcgacagagcctac
agggtgtgcgacctgaaggaaaacaagaagtaccagttccaggtgcgtgcggccaacatg
gcgggggtcggcatcccatcgttgcctagcaacaccttcctatgtgaggagtggaccatt
gctgtgccaggaccccctcacgatctccaggtgaccgaggtacgcagcagctccctggtg
ttgctatggaagccgccggtttatcagggtcgcgacgcggtcaacggcttctacgtggac
atcaaggaggcgggggcgtctgaggaggcgtggcgaggcatcaacaagaaggcaaccgac
agcaagttcatcaagatcgagaacctgcaggaaggggagaaatacgtgttccgtgtgcga
gctcagaacaacgctggtgtaggaaacgcttctgaggttacagagcccaccctggccgag
accaaagcaggtaccaaggagatcatggtggatgttgacgacgatggcgtcatctccctg
aacttcgagtgctctgcgatgagcgccgaatctaaattcgtctggtccaagaactacgag
gagatctcagacaccgaacgcatcgccgtagaaaccaagggaagcaaggccaaagcctcg
ttcctcgcccctggagaggaagacattggtgtatactcctgttctgtcacacacaccgac
ggagcctctgccagctacgacctcacagcagaagagctcaagaagcttctggagaccagc
cacgaccacaagttccccattattcccctgaagtcggagttggcggtggagctacaggag
aagggacgtgttcgtttctggctgcaggcagagaagatatccgccaatggaaaagtggat
tatgtgttcaatgacaacagtctgtctgcaggagagaagtacaagatgaactttgacaag
aacacgggcgtgatcgagatgatcatggagtccctgacgccgaaggatgaggggacattc
accttccagctgcaggacggcaaggccaccaaccagtccagtctggtgctgataggagat
gtgttcaaggctctccagaaggagtctgagttccagatgaaggagtgggtcaggaaacaa
ggtcctcactttgtggagtaccttggattcgaggtgactccagaatgctgtgtgatcctc
aagtgtaaggtggggaacatcaagaaggacacagtggcgttgtggcagaaggacggccaa
gagatcaagtctgaccagcagctcagcttcacagagggagtgctgaagctggagatcgct
cagcgcggcgcccgtgcagtcgctggtacagcggacacagtcgacacagtcgacgacgtt
acctggagacaacttaaaatctccaagaaggacgccggtgtgtacaacatcgttcttaag
gacgacagagggaaggacacgtctacgttgaatctgactgatcaaggcttcagggatatg
atgaatgaagtgttcagtgtaattgctaactcctccactgccctgaagatcacgagcaca
gacgagggaatccgcctctacaccttcgtcagctattacaacgacctgctccaagtcaca
tggcactacaaagactcagccatctccttctcggaccgcattaagagcggagtggtgggc
gagcagctgtggctgcagatcaaggagcccacggagaaggacacggggaagtacgctatc
gagttcaacgacggcaagggaggcctgcgccgcaccgtggagctgtccggacaagcgttc
gacgatgccgtcgcagaattcaagagactgaaggctgctgctatcgctgaaagaaacagg
gcccgggtgaaaggaggtctgcctgatgtggtcaccatccaggaggggaaggatctgaac
ctgacctgcaacatctccggtgaccccgtgcccgaggtgacctggctgaagaacgaacgg
gagatcgtgtccgacgaccacttactcctcaagtttgagtcagggaagttcgccagcttc
atcatcacgaaggtgaactcggatgactcgggcaagtacagcatcctggtgaagaacaag
ttcgggacggagagcggggaattcaccctgcaagtgacgcaggggcccgtagacctgggc
gtgacctcctacctgaccgaccaggacgggaacgtgatggtgggcccaaacacgacgccg
ccaaagaaacggacgcccgctacagcgggaaccaagcagaagccaagcgactcgccagta
ccaaagacccctccgcccggaaaacaagtcgacggcagagagaatgtggagcaggtaaag
gagacggggaaaacggtgacggaggacaccgctgaaacactgcccgctccgaccgcaacc
gggaccacgccagagacaccgcaacacccagacgcagagctctgcgatgaggctgcctcg
ccctccgggtcacccgaggaaaccacggcacagtga
DBGET
integrated database retrieval system