KEGG   Gadus morhua (Atlantic cod): 115537095
Entry
115537095         CDS       T10832                                 
Symbol
myom1
Name
(RefSeq) myomesin-1 isoform X1
  KO
K24495  myomesin
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115537095 (myom1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:gmh04990]
    115537095 (myom1)
Domain-containing proteins not elsewhere classified [BR:gmh04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type III domain-containing proteins
   115537095 (myom1)
SSDB
Motif
Pfam: fn3 I-set Ig_3 Ig_2 Ig_DSCAM-DSCAML_C ig V-set Pur_ac_phosph_N Ig_CD22 C2-set_3
Other DBs
NCBI-GeneID: 115537095
NCBI-ProteinID: XP_030204604
Ensembl: ENSGMOG00000005713
LinkDB
Position
23:10641940..10671506
AA seq 1811 aa
MPGSLPFYQKHQRHYDHDYRSSETQALVSKYRASSRSSSGYPAHTCTSGGYPAHTCNSGY
APHICTGHGLTSARTSTSRGLTASSYSGLEQSSQLTKRAKATHLAVDREHHIIGYVVPIF
RGSREFAGGYSGVEDSRLKATSASMWGQDHFTSGLEMERSEVSSRKVTIRESAERISLSK
TIYENEEHSKRMNKDSLMHAPEFVIKPRSHTVWENQSVRLHCTLSGWPNPHVVWYKNNVT
IDPIAHPGKYKIESSYSVHSLEIDRCDFDDTAQYHVSAMNAKGEQSAYASVVVKRFKGEM
DTSAPSPRRSYPRVGQVSEYGITFKTHIVDTFGVSFGREGETMSLGCTVIIHPNLERYQP
GVEWYRDDVLLAPSKWHQMHWSGDRATLTLTHLNKEDEGLYTLRVTTKSGYETYSAYVFV
RDADAEVEGAPGAPLDVRCLDANKDYVIVSWKQPAVDGGNSILGYFVDRCEVGTNHWIQC
NDTPVKFARLPVTGLVEGRSYAFRVRAVNKSGMSRPSRTSEPVAAVDAADRARMRGTSAP
VTGQIIVTEEEPAEGVVPGKPLELEVTEATKNYVVLSWKPPGERGHEGIMYYVEKCVSGT
DSWQRVNTEIPVKSPRFALFDLAEGKSYSFRVRCCNSAGVGEPSPPTEATTVGDKLDVPA
APERVVATRNTATSVVVSWEKSRHAKDLVGYYIETSVVGSDTWEPCNNKPVPGSRFVCHG
LVTGETYVFKVRAVNAAGISMSSQESEPVLVKAAIGGGIPHGVLPEMGPGGNRGGLTQHG
PRWTDTHDTVQPPADTTMLRGNALTDTPTPTAKAEASVAANAKANANSVESQYPATKSPN
KGAKRGSVSWAPELESGSGSVSDVVSNTPLAAPITAPITAPITAAITPPITALITPPLAP
ACNGEEEAIGGSREPLEKRKFSVDATAQRPRRDSTASPAPPFGISVLECVRDSMVLGWKQ
PAFVGGSDIIGYFVDYREVFDGLEGQWHEANIQSVSDRAYRVCDLKENKKYQFQVRAANM
AGVGIPSLPSNTFLCEEWTIAVPGPPHDLQVTEVRSSSLVLLWKPPVYQGRDAVNGFYVD
IKEAGASEEAWRGINKKATDSKFIKIENLQEGEKYVFRVRAQNNAGVGNASEVTEPTLAE
TKAGTKEIMVDVDDDGVISLNFECSAMSAESKFVWSKNYEEISDTERIAVETKGSKAKAS
FLAPGEEDIGVYSCSVTHTDGASASYDLTAEELKKLLETSHDHKFPIIPLKSELAVELQE
KGRVRFWLQAEKISANGKVDYVFNDNSLSAGEKYKMNFDKNTGVIEMIMESLTPKDEGTF
TFQLQDGKATNQSSLVLIGDVFKALQKESEFQMKEWVRKQGPHFVEYLGFEVTPECCVIL
KCKVGNIKKDTVALWQKDGQEIKSDQQLSFTEGVLKLEIAQRGARAVAGTADTVDTVDDV
TWRQLKISKKDAGVYNIVLKDDRGKDTSTLNLTDQGFRDMMNEVFSVIANSSTALKITST
DEGIRLYTFVSYYNDLLQVTWHYKDSAISFSDRIKSGVVGEQLWLQIKEPTEKDTGKYAI
EFNDGKGGLRRTVELSGQAFDDAVAEFKRLKAAAIAERNRARVKGGLPDVVTIQEGKDLN
LTCNISGDPVPEVTWLKNEREIVSDDHLLLKFESGKFASFIITKVNSDDSGKYSILVKNK
FGTESGEFTLQVTQGPVDLGVTSYLTDQDGNVMVGPNTTPPKKRTPATAGTKQKPSDSPV
PKTPPPGKQVDGRENVEQVKETGKTVTEDTAETLPAPTATGTTPETPQHPDAELCDEAAS
PSGSPEETTAQ
NT seq 5436 nt   +upstreamnt  +downstreamnt
atgccggggtcccttccattctaccagaagcaccagcgccactacgaccacgactaccgc
agctccgagacccaggcgctggttagcaagtaccgcgctagcagcagaagcagtagcggc
tatcctgcccacacctgcaccagtggtggctatcctgcccacacatgtaacagtggctac
gcaccccacatctgtacgggccacggcctgaccagcgccagaaccagcaccagcaggggc
ctcacagcgtcttcctactctgggttggagcagagcagccagctgaccaagagagccaag
gccacacatcttgcggtggacagggaacaccacatcatcggctacgtagtgccgatcttc
aggggcagtcgggagtttgctggtggttattcgggtgtagaagattcacgcttgaaggcg
acgtctgcctccatgtggggtcaggatcattttacgagtgggctggagatggagaggtca
gaggtcagctccaggaaggtgaccatacgcgaatcagctgaacgcatctccctcagcaaa
acgatctatgaaaacgaggaacacagcaagagaatgaacaaggacagcctgatgcacgcg
ccagagtttgtgatcaaaccacgctcacacacggtgtgggagaaccagagtgtacgccta
cactgcaccctaagcggatggccaaacccacatgtggtgtggtacaaaaacaatgtgacc
atcgaccccattgcccacccgggcaaatataagatagagagcagctacagtgtccactcc
ctggagattgacagatgtgatttcgacgacacggcgcagtaccacgtgtctgccatgaac
gcaaagggggagcagtctgcttacgcctcggttgtggtcaagagatttaaaggagaaatg
gacacgtcagcaccttcacccagacggtcctatccacgagtgggccaggtgtctgagtac
ggcatcacctttaagacccacatcgtggacacgtttggcgtctccttcggccgggagggc
gagaccatgagcctgggctgcacggtcatcatccaccccaacctggagcgctaccagccc
ggcgtggagtggtaccgcgacgacgtgctgctggcgcccagcaagtggcatcagatgcac
tggagcggcgaccgcgccaccctgaccctcacgcacctcaacaaggaggacgagggcctg
tacaccctccgcgtcaccaccaagtccggatacgagacctactctgcctacgtctttgtc
agagatgcggatgcggaggtggaaggggcccctggggcccccctggacgtgcgctgtctg
gacgccaacaaagattacgtcattgtctcctggaagcagccggcggtggacggagggaac
tccatcctgggatactttgtggacaggtgtgaggttggaaccaaccactggatccagtgc
aacgacacccccgtcaagttcgcccgcctccccgtcaccgggctggtggaggggcggtcc
tacgccttccgcgtgcgggccgtcaacaagagcggcatgagccgcccgtcacgcacctct
gaacccgtggccgccgtggacgccgccgaccgcgcccgcatgagaggaacctcggccccc
gtgactggtcagatcatcgtgacggaggaggagccagcagagggcgtggttcccgggaaa
ccccttgagctggaggtgaccgaggcgaccaagaactacgtggtcctgagctggaagccc
cctggagagagaggtcacgagggcatcatgtactacgtggagaagtgtgtgtccgggacg
gacagctggcagagggtgaacacagagatcccggtgaagtccccccgcttcgcgctgttc
gacctggccgaggggaagtcctacagcttcagggttcgctgctgcaactcagccggggtg
ggggagccgtccccccccaccgaggccaccaccgtgggagacaagctggatgtcccagcc
gccccagagcgtgtggtggcgaccaggaacacagccacgtcggtggtggtctcctgggag
aagtcccgccatgccaaggacctggtgggctactacatagagaccagcgtggtgggcagc
gacacctgggaaccctgcaacaacaagcctgtaccagggtccaggttcgtgtgccatggc
ctggtgaccggcgagacctacgtgttcaaagtgagagcggtgaacgctgctggtattagc
atgagctctcaggagtctgagccagtcctggtcaaggccgctattgggggcggcattcct
cacggtgtgttgccggaaatggggccgggagggaacaggggcggactaacccagcacggg
ccacgctggacggacacgcatgacactgtccagccccccgctgacactaccatgctaagg
ggcaacgctctgactgacacgcccacgcccacggctaaagccgaggcgagcgtcgcggct
aatgctaaggctaatgctaactcagttgagtcccaatatcccgccactaagagtccaaac
aaaggcgcaaagcgaggcagcgtctcttgggcccccgaactggagtcgggatcaggttca
gtatcagacgtggtctcaaacacgcccctagcggcgcccataacggcgcccataacggct
ccaataacggcggccataacgccgccaataacggcgctcataaccccgcccctagcccca
gcctgcaatggtgaggaagaggccatagggggcagcagagagccgttagaaaagcgtaag
ttctctgtagacgccacggcacaaagacccaggagagactcgacagcctcccctgcgccc
ccgtttggcatcagcgtcctggagtgtgtccgggactccatggtgctggggtggaagcag
cccgcctttgtgggcggttcagatatcatcggctactttgtggactatcgcgaggtcttt
gacggcttggagggccagtggcacgaggccaacattcagtcggtcagcgacagagcctac
agggtgtgcgacctgaaggaaaacaagaagtaccagttccaggtgcgtgcggccaacatg
gcgggggtcggcatcccatcgttgcctagcaacaccttcctatgtgaggagtggaccatt
gctgtgccaggaccccctcacgatctccaggtgaccgaggtacgcagcagctccctggtg
ttgctatggaagccgccggtttatcagggtcgcgacgcggtcaacggcttctacgtggac
atcaaggaggcgggggcgtctgaggaggcgtggcgaggcatcaacaagaaggcaaccgac
agcaagttcatcaagatcgagaacctgcaggaaggggagaaatacgtgttccgtgtgcga
gctcagaacaacgctggtgtaggaaacgcttctgaggttacagagcccaccctggccgag
accaaagcaggtaccaaggagatcatggtggatgttgacgacgatggcgtcatctccctg
aacttcgagtgctctgcgatgagcgccgaatctaaattcgtctggtccaagaactacgag
gagatctcagacaccgaacgcatcgccgtagaaaccaagggaagcaaggccaaagcctcg
ttcctcgcccctggagaggaagacattggtgtatactcctgttctgtcacacacaccgac
ggagcctctgccagctacgacctcacagcagaagagctcaagaagcttctggagaccagc
cacgaccacaagttccccattattcccctgaagtcggagttggcggtggagctacaggag
aagggacgtgttcgtttctggctgcaggcagagaagatatccgccaatggaaaagtggat
tatgtgttcaatgacaacagtctgtctgcaggagagaagtacaagatgaactttgacaag
aacacgggcgtgatcgagatgatcatggagtccctgacgccgaaggatgaggggacattc
accttccagctgcaggacggcaaggccaccaaccagtccagtctggtgctgataggagat
gtgttcaaggctctccagaaggagtctgagttccagatgaaggagtgggtcaggaaacaa
ggtcctcactttgtggagtaccttggattcgaggtgactccagaatgctgtgtgatcctc
aagtgtaaggtggggaacatcaagaaggacacagtggcgttgtggcagaaggacggccaa
gagatcaagtctgaccagcagctcagcttcacagagggagtgctgaagctggagatcgct
cagcgcggcgcccgtgcagtcgctggtacagcggacacagtcgacacagtcgacgacgtt
acctggagacaacttaaaatctccaagaaggacgccggtgtgtacaacatcgttcttaag
gacgacagagggaaggacacgtctacgttgaatctgactgatcaaggcttcagggatatg
atgaatgaagtgttcagtgtaattgctaactcctccactgccctgaagatcacgagcaca
gacgagggaatccgcctctacaccttcgtcagctattacaacgacctgctccaagtcaca
tggcactacaaagactcagccatctccttctcggaccgcattaagagcggagtggtgggc
gagcagctgtggctgcagatcaaggagcccacggagaaggacacggggaagtacgctatc
gagttcaacgacggcaagggaggcctgcgccgcaccgtggagctgtccggacaagcgttc
gacgatgccgtcgcagaattcaagagactgaaggctgctgctatcgctgaaagaaacagg
gcccgggtgaaaggaggtctgcctgatgtggtcaccatccaggaggggaaggatctgaac
ctgacctgcaacatctccggtgaccccgtgcccgaggtgacctggctgaagaacgaacgg
gagatcgtgtccgacgaccacttactcctcaagtttgagtcagggaagttcgccagcttc
atcatcacgaaggtgaactcggatgactcgggcaagtacagcatcctggtgaagaacaag
ttcgggacggagagcggggaattcaccctgcaagtgacgcaggggcccgtagacctgggc
gtgacctcctacctgaccgaccaggacgggaacgtgatggtgggcccaaacacgacgccg
ccaaagaaacggacgcccgctacagcgggaaccaagcagaagccaagcgactcgccagta
ccaaagacccctccgcccggaaaacaagtcgacggcagagagaatgtggagcaggtaaag
gagacggggaaaacggtgacggaggacaccgctgaaacactgcccgctccgaccgcaacc
gggaccacgccagagacaccgcaacacccagacgcagagctctgcgatgaggctgcctcg
ccctccgggtcacccgaggaaaccacggcacagtga

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