Gadus morhua (Atlantic cod): 115537101
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Entry
115537101 CDS
T10832
Name
(RefSeq) transcriptional repressor NF-X1-like
KO
K12236
transcriptional repressor NF-X1
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115537101
04121 Ubiquitin system [BR:
gmh04121
]
115537101
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
115537101
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
115537101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
MG280
Motif
Other DBs
NCBI-GeneID:
115537101
NCBI-ProteinID:
XP_030204631
Ensembl:
ENSGMOG00000006198
LinkDB
All DBs
Position
23:complement(10179698..10195965)
Genome browser
AA seq
1184 aa
AA seq
DB search
MAEGSSEPPERLPVRGPEDRDHSFSGLRRGRSRRNYPETNSSSYDGHPRHHGYSQQRPKQ
PRDHDPATLRTQTPPPAHQVEDGGWAQGGAGGRGGRGIARGGSRHGYHGAGGYSGGPAGQ
RWPRSGGEPGTYRGTSTRGAGYTRSDPVDRPDEGEARWRREEGTRGSARANEPPNSRPKR
SGRFSQEQRGGRGESEDKRGEEAHFRRNQENQGYNRNQDENHGNQDRQQWNHGNQDRQQW
NHGNSERRRNHGSDDGQWNHGNEDRRWNHGNEDRRWSQEDKDTAEGLGSAGTKGKNYHSD
QRERTQKSRKGPEQSVHRLLPLQQNLQSQAPPPRRSGPIKPPQAQREDGRAERREGSPED
PGRPKPPQAEERKDKDRGQRRAPQRDQKPAQERWDNTSKSKESQTGCLIEQLSQEKYECM
VCCDVIRLMSPVWSCHGCYHVFHLNCIKKWARSPASQAEDSTEGWRCPACQNVAPKQPAS
YICFCGKVTNPEWQRSEIPHSCGDLCGKKRTGADCPHSCNILCHPGPCPQCPAFVTKSCL
CGKTSQPVRCGQAAVLQCTSVCGAILNCTQHTCAQVCHAGTCQPCQLEVQQVCYCGAVER
QVLCGTDRDASDGTGHFSCQKTCGKTLGCALHQCQQPCHSGACQACPRSPSLVKSCPCGQ
TPLAKLLELGYAERHTCTDPIPSCGKSCSKPLPCGSNDIIHMCEALCHEGPCGPCSLFSS
IKCRCGSKAKEVPCATISKEEQLIFTCEKRCMKKRACGRHKCNDLCCVSVDHRCPQICSH
KLGCGLHRCQEPCHRGNCDPCWQASFEELACHCGQTILYPPIACGTLPPECKNLCTRRHE
CDHQVFHNCHSEERCPPCTYLTQKWCMGKHEQRSNIACHLQDISCGLACNKTLPCQMHQC
RRICHRGDCLVDGGCSQPCAIARSDCGHPCAAPCHTGSSCPRNPCTTKVALQCECGRRKE
TVMCPEAASSYQRYAAIAMASKLSDMQLGESVDIGQFITKKEMKQTRLECDLECATFERN
RRLAEALQIDTSADPFNTRSASKYTDSLKEDARKELKFVSDVEKEVKNLVELANKSKQPK
RSHSFQPMKREHRKLVHELAEAYGVESVSYDSEPKRNVVITAYKGKASCPASTLTSLIER
EGGTRAPPPIAHIKQHSSRVESSAGSWSKTVKEEPVIDYFDVQD
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggcagagggctcgtcagagccaccagagcgccttcctgtgaggggtcctgaggatcgg
gaccatagttttagtgggttgaggcgaggccggtccaggcggaattacccagaaaccaac
agcagctcttacgacggtcaccccagacatcacggttactctcaacagcgtcctaaacaa
ccccgtgatcatgaccctgccacccttcgaacccaaaccccaccaccggcccaccaagta
gaagatggtggctgggcccagggaggggctggaggtcggggtggtagaggtattgcaaga
ggtggatccagacatggctaccatggtgctggaggttatagcggaggtcctgctggccaa
aggtggccgaggtctggaggggaacctggtacgtacaggggaaccagcactaggggtgct
ggttacactaggtcagaccctgtagacaggcctgacgaaggggaggctcgctggcgcaga
gaggagggaaccagaggctcggcacgcgccaacgaacccccaaacagcagaccaaaacga
tccggtaggttttcccaggagcagagaggaggaagaggagagtcggaggacaagaggggg
gaagaggcgcatttcagacggaaccaggaaaaccagggttacaataggaaccaggatgag
aaccacggcaaccaggatagacagcagtggaaccacggcaaccaggatagacagcagtgg
aaccacggcaactctgagagacgacggaaccatggctccgatgacgggcagtggaaccac
ggaaacgaggatcgacgatggaaccatggaaacgaggatcgacgatggagccaggaagac
aaggatacagccgaaggcttgggctctgccggcaccaaagggaagaactaccactcagac
cagcgggagagaacccagaagagccggaaaggtcccgagcagagcgtccatcgccttctt
cctctccagcagaacctccaatcccaggccccccccccccgccgctcgggccccatcaag
cccccccaggctcagagggaggacggcagggcggagaggagggaaggcagcccggaagac
ccagggcgccccaagcccccccaggcagaggagagaaaggataaggacagagggcagcgg
agagccccccagcgggaccagaagccggcccaggagaggtgggacaacacgtccaagagc
aaggagtctcagaccggttgtctgatagagcagctctcccaggagaagtacgagtgcatg
gtgtgctgtgatgtgatccgcctcatgtcgccggtgtggagctgccatggctgctaccac
gtcttccacctcaactgcatcaagaagtgggccaggtcccctgcctctcaggctgaagac
tctacggagggctggcgctgtcctgcgtgccagaacgttgctccgaagcagcctgcgtcc
tacatctgcttctgtggtaaagtgaccaatcccgagtggcagcgtagtgagatcccccac
agctgtggagacctatgtgggaagaagaggaccggagccgactgcccccactcctgtaac
atcttgtgtcaccctggtccgtgtccacagtgcccagcgtttgtaaccaagtcctgcctc
tgtgggaaaaccagccagccagtgcgatgtggccaggccgcggtgctgcagtgtaccagc
gtgtgcggtgccatcctcaactgtacccaacacacctgtgcccaggtgtgccacgcaggc
acctgccaaccctgccagctggaggtccagcaagtgtgctactgtggagcggtggagcgg
caggttctctgtgggacggacagggatgcttccgatggcaccggacacttcagctgtcag
aagacctgtgggaagaccctgggctgtgcgctccaccagtgccagcagccgtgccactct
ggggcctgccaggcctgcccccgctcccccagcctggtgaagagctgcccctgtgggcag
acccccctggctaagctcctggagctgggctacgctgagcgccacacctgcaccgacccc
ataccctcctgtgggaagagctgcagcaaacccctgccctgcggatccaacgacatcatc
catatgtgcgaggccctgtgccatgaggggccgtgtggcccctgctccctcttctcctcc
atcaagtgtcgctgcggctccaaggccaaggaagtcccgtgtgcaacgatttccaaagaa
gagcagctcatattcacctgtgagaagcgctgcatgaagaagcgggcctgtggaagacac
aaatgcaacgatttgtgttgtgtgagcgtggaccacaggtgtccccagatctgcagtcac
aaactcggctgtggcctccaccgctgccaggaaccctgtcaccgtggcaactgtgacccc
tgctggcaggccagttttgaggagctggcatgccactgtggacagaccatcctgtacccg
cctatagcctgtgggactctccccccagagtgtaagaacctgtgcacccggaggcacgag
tgtgaccaccaagtgttccacaactgccacagtgaggagcgctgtccgccctgcacctac
ctcacccagaagtggtgcatggggaaacacgagcaacgcagcaacatcgcgtgccacctg
caggacatctcgtgtgggctggcctgcaacaagacgctgccctgccagatgcaccagtgc
aggcgcatctgtcaccgtggcgactgtctggtggacgggggctgcagccagccctgtgcc
atcgcacggtccgactgcggacacccctgcgccgccccctgccacacaggaagcagctgc
ccccgcaacccctgcaccaccaaggtggcgctgcagtgcgagtgtggtcgcagaaaggag
actgtgatgtgtcctgaggcagccagttcctatcagaggtatgcagccattgccatggcc
agcaagctgtctgacatgcagctgggggagtcggtggacatcggccagttcatcaccaag
aaggagatgaagcagaccagactggagtgtgacctagagtgcgctacgtttgagcggaac
agacgattggccgaggctctgcagattgacacctccgccgaccccttcaacacccgctcc
gcctccaagtacacggacagcctcaaggaagacgcaaggaaggagctgaagtttgtaagc
gacgtggagaaggaggtgaagaaccttgtggaactggctaacaagagcaagcagccaaag
aggagccacagcttccagcccatgaagcgcgagcacaggaagttggtccacgagctggcg
gaggcatacggcgtggagagcgtcagctacgacagtgaacccaaacgtaacgttgtcatc
accgcctacaaggggaaggcctcatgccccgcctccacactgacatcactcatcgagagg
gagggcggcaccagagccccgccccctattgcccacatcaaacaacacagcagcagggtg
gagagctctgcaggcagctggtccaagaccgtgaaggaggaaccggtcatcgattacttt
gatgtccaggattaa
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