Gadus morhua (Atlantic cod): 115537109
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Entry
115537109 CDS
T10832
Symbol
vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04140
Autophagy - animal
gmh04148
Efferocytosis
gmh05132
Salmonella infection
Brite
Membrane trafficking [BR:
gmh04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
115537109 (vps41)
BRITE hierarchy
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115537109
NCBI-ProteinID:
XP_030204644
Ensembl:
ENSGMOG00000005969
LinkDB
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Position
23:10523297..10541863
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AA seq
856 aa
AA seq
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MAEVEDQERKSSEEFTDDSEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
GTHFGKVFLLDVQGNVTQKFEISSVKINQVSLDESGENVGICSEDGKVQVFGLYTREGFH
ENFDCPIKVVALHPQFSKSNYKQFVTGGSKLLLYERNWLNRWKTSVLHEGEGTISNIQWR
TNLIAWANNVGVKIYDISTKQRITNVLRDDVSLRPDMYPCSLCWKDNQTLIVGWGKSIKM
CAVKERNPTELRDLPSRYVEIVSAFETEFFISGLAPLADQLVTLYFVKENAKQLEEEEEF
RARPRLDIIQPLAESCEEISSDALSVRNFTDNECRDYRLEHAEGESLFYIISPKDIVVAK
ERDQDDHIDWLLDKKKYEEALMAAEISFKNIKRHDVQKIGMAYINHLVEKGDYDTAARKC
QKVLGKNMELWENEVYRFKTIGQLKAISQYLPRGDLRLRPAIYEMILHEFLKTDYEGFAT
LIREWPGELYNNMAVVQAVGDQLKKDPTHRTLLTTLAELYTYDQRYDRALEIYLRLRHKD
VYQLIHKHNLFASIEDKIVLLMDFDKEKAVDMLLDNEDKISTDRVVEELRDRPELLHVYL
HKLFKRDHHKGQRYHERQIGLYAEYDRPNLLPFLRDSTHCPLEKALEICQERNFVEETVF
LLSRMGNCRRALQMIMEELGDVDKAIDFAKEQDDSELWEDLISYSIDKPPFITGLLNNIG
THVDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLQKMHRT
QMRGVRVDDENICEACHGTILPSDMAQPFSVVVFNCRHMFHKECLPSSGTIPAVQFCNIC
SAKKRGPGSGILDMKK
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtggaggatcaggagaggaagtccagcgaggagttcacagatgattctgag
gaggaagagagcgaggaggagcccaagctgaagtacgagcgactgtccaatggcgtgacg
gagattcttcagaaagatgcggccagctgcatgaccgtccacgacaagttcttggctctc
gggactcacttcgggaaggtgttcctgttggacgttcaggggaacgtcacacagaagttt
gaaatcagctccgtgaagatcaaccaggtcagtctggacgagagcggagagaacgtgggc
atctgctctgaggatggcaaggtccaggtgtttggcctgtataccagggagggcttccac
gagaacttcgactgtcccatcaaggtggtggcgctgcatccacagttcagcaaatccaac
tacaaacagtttgtcactggggggagcaagcttctgctgtacgagaggaactggctgaac
cgctggaagacgtctgttctccacgagggagaaggaaccatctccaacatccagtggaga
actaacctcattgcctgggctaacaatgtgggtgtgaagatctatgacatcagcaccaag
cagcgcatcaccaacgtgctgcgggacgacgtgagcctcagaccggacatgtacccctgc
agcctctgctggaaggacaaccagaccctcatcgtgggctgggggaagtcgatcaagatg
tgcgccgtgaaggagagaaacccgactgaactgcgagaccttcccagtcgctacgtggaa
atagtgtcggcgtttgagacagagttcttcatcagcggtctggcacctctggctgaccag
ctggtcacactgtacttcgtcaaggagaacgcaaaacaactggaagaggaggaggagttc
cgtgcgcggcctcgtctggacatcatccagccgctggcggagagctgtgaggagatctcc
tcagacgctctgtcggtacgcaacttcacggacaacgagtgtcgtgactaccgcctggag
catgctgagggagagtctctgttctacatcatcagtcctaaagacatcgtggtggccaag
gagagggaccaggacgaccacatcgactggctgctggacaagaagaagtacgaggaggcc
ctgatggcagcagagatcagctttaagaacatcaagagacacgacgtgcagaagatcggc
atggcctacatcaaccacctggtggagaagggggactatgacactgctgccagaaaatgc
caaaaggttcttggtaaaaacatggagctgtgggagaatgaggtgtaccgcttcaagacc
atcggccagctgaaggccatcagccagtacctgcccaggggcgatctacgcctacgacca
gccatctatgagatgatcctccatgaattcctcaagaccgactatgagggcttcgccacg
ctgatccgggagtggccgggggagctttacaacaacatggccgtcgtccaggcggtggga
gaccagctgaagaaggaccccacccaccgcacgctgctcaccaccctggctgaactgtac
acgtacgaccaacgctacgaccgggcactggagatctacctgcggctgaggcacaaagac
gtgtatcagctgatccacaaacacaacctcttcgcctccatagaggacaagatcgttctg
ctcatggactttgataaagagaaagccgtggacatgctcttggataacgaagacaagata
tcgacggaccgagtggtggaggagctcagggaccgaccggagctgctccatgtgtacctc
cataagctgttcaagcgcgaccaccacaagggccagcggtaccatgagcgacagatcggc
ctctatgccgagtacgaccggcccaacctgctgcccttcctccgggacagcacccactgt
cctctggagaaggctctggagatttgtcaggagaggaactttgtggaggagacggtcttc
ctgctcagccggatggggaactgcaggcgggcactgcagatgatcatggaggagctgggc
gacgtggacaaggccatagacttcgctaaggagcaggacgactctgagctgtgggaggac
ctcatctcgtactccatagacaaaccaccattcatcacgggtctgctgaataacatcggg
acccacgtggaccccatactgctgatccaccgcatcaaggagggcatggagatccccaac
ctccgggactccctggtcaagatcctgcaggactacaacctccagatcctgctgagagag
ggctgtaagaagatcctggtggctgattccctgtccctgctccagaagatgcaccgcacc
cagatgaggggggtccgtgtcgacgatgagaacatctgtgaggcgtgtcatgggaccatt
ttaccgtcagacatggcccagcccttcagcgtggtggtcttcaactgtagacatatgttc
cacaaggagtgtttaccttcttcaggaaccattcctgcagtccagttctgcaacatctgc
agtgcgaagaagagaggtcctgggagtggaatactcgacatgaagaagtga
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