Gadus morhua (Atlantic cod): 115537130
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Entry
115537130 CDS
T10832
Symbol
smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115537130 (smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmh03021
]
115537130 (smarcd3)
03036 Chromosome and associated proteins [BR:
gmh03036
]
115537130 (smarcd3)
Transcription machinery [BR:
gmh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115537130 (smarcd3)
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115537130 (smarcd3)
PBAF complex
115537130 (smarcd3)
GBAF(ncBAF) complex
115537130 (smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
115537130
NCBI-ProteinID:
XP_030204686
Ensembl:
ENSGMOG00000006227
LinkDB
All DBs
Position
23:complement(10146910..10178782)
Genome browser
AA seq
504 aa
AA seq
DB search
MEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGASPAVRPGLPT
PVIEASRKRPAPSQQVQQQAVQNRTRKKPVGFPGANEMPARQMDMREPQSDPTLGSNAKR
RKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQQKRKLRL
YISNTFNPAKPDADDSDGSIASWELRVEGKLLDDPGKLKRKFSSFFKSLVIELDKDLYGP
DNHLVEWHRTATTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQT
RSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPI
VINHVISVDPNDQKKTACYDIDVEVEDPLKSQMSSFLLSTANQQEIASLDNKIHETIESI
NQLKIQRDFMLSFSRDPKGYIQDWLQSQSRDLKLMTDVVGNPEEERRAEFYHEPWSQEAV
SRYFYCKIQQRRQELEQALAVRNT
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggaggagacggccgggggggccaggaaggccaccaagagcaaactgtttgagttcctc
gtccacggagtgcgtcccggcatgccgtcaggagccaggatgccccaccagggggcgccc
atgggcccgcccgggcccccgtacggagccagccctgcggtgcggccgggcctgcccacc
cccgtcatcgaggccagccgcaagagacccgccccctcccagcaggtccagcagcaggcc
gtccagaaccgcacccggaagaagcccgtcggattcccgggagccaatgagatgccggca
agacagatggacatgagagagccccaatcagatcccacgctcggatcaaatgccaagaga
aggaaaatggcggacaagattcttccacagaggatccgtgagctggtcccggagtcgcag
gcctacatggacctgctggccttcgagaggaagctggaccagaccatcatgaggaagagg
gtggacatccaggaggcgctgaagagacccatgaagcagcagaagcggaaattgcgtcta
tacatctccaacaccttcaacccagctaaacccgacgccgacgactccgacggcagcatt
gcatcatgggagctgcgggtggagggaaagctactggacgacccagggaagttgaagagg
aagttctcgtcgttcttcaagagtctggtcatcgagctggacaaggacctatacggacct
gacaaccacctggtcgagtggcaccgcaccgccaccacccaggagacggacggcttccag
gtgaagcggccgggggacgtgagcgtccgctgcaccctgctgctcatgctggactaccag
cccccccagttcaaactggacccccggctggcccggctgctgggcatccacacccagacg
cgctcctgcatcatccaggcactgtggcagtacgttaagaccaacaagctgcaggactcc
cacgacaaggagtacatcaactgtgacaagtacttccagcagatcttcgactgtccgcgt
ctcaagttctcagagatcccccagcggctcaccaacctgctgctgcccccggaccccatc
gtcatcaaccacgtcatcagcgtggatcccaacgaccagaagaagacggcgtgctacgac
atcgacgtggaggtggaggatcccctgaagagccagatgagcagcttcctgctctccacg
gccaatcagcaggagatcgcctccctggacaacaagatccatgagaccatcgagtccatc
aaccagctgaagatccagagagacttcatgctgagcttctccagagaccccaaggggtac
atccaggactggctgcagtcccagagcagagacctaaagctgatgactgacgtggtgggc
aaccccgaggaagagaggagggccgagttctaccacgagccctggtcccaagaggccgtc
agccgctacttctactgcaagatccagcagaggaggcaggagctggagcaggccctggca
gtacgcaacacctaa
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