KEGG   Gadus morhua (Atlantic cod): 115537142
Entry
115537142         CDS       T10832                                 
Symbol
shh
Name
(RefSeq) sonic hedgehog protein
  KO
K11988  sonic hedgehog
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    115537142 (shh)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:gmh01002]
    115537142 (shh)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:gmh00536]
    115537142 (shh)
Peptidases and inhibitors [BR:gmh01002]
 Cysteine peptidases
  Family C46: hedgehog family
   115537142 (shh)
Glycosaminoglycan binding proteins [BR:gmh00536]
 Heparan sulfate / Heparin
  Morphogens
   115537142 (shh)
SSDB
Motif
Pfam: HH_signal Hint Peptidase_M15_3 DUF7764 Intein_splicing Ribosomal_S6e
Other DBs
NCBI-GeneID: 115537142
NCBI-ProteinID: XP_030204705
Ensembl: ENSGMOG00000027117
LinkDB
Position
23:11150586..11158271
AA seq 414 aa
MLVLSRMLLVVLVCLGLASPGAGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRSSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGLASVSLADGGRKYVRDLTPGDSVLAVDDQGTLTVTDFIM
FLDKDSATTRLFYVIETETGERLTLTAAHLLFVESNATDARGQMTAVFASAVTAGQKVFV
LQEPNDVLTPVTVKRIYRQEHEGSFAPLTARGSLVVDHVLASCYAVVEDQQLAHWAFAPV
RFSYWLSGLLHLHVKGAAAHADGVHWYSDVMYRLGRWVLNEHAMHPLGVSRPSS
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgctcgtgctgagcagaatgctgctggtggtcctggtgtgtctggggctcgcgtcgccc
ggcgcgggctgcggaccgggaaggggctacgggaggcggcgacatcccaagaagctgacg
cctctcgcgtacaagcagttcataccaaacgtggccgagaagacgctgggcgcgagcgga
agatacgagggcaagatcacgcgcagctcggagcgcttcaaggagctcacccccaactac
aacacggacatcatcttcaaggacgaggagaacaccggggcggaccgcctcatgactcag
agatgtaaggacaagctgaactccctcgccatctcggtgatgaaccagtggcccggggtg
aagctgcgggtgacggagggctgggatgaggacggacaccacttcgaggagtccctgcac
tacgagggccgcgcggtggacatcaccacgtccgaccgcgacaagagcaagtacggcacg
ctgtcccgcctggcggtggaggcgggcttcgactgggtctattacgagtccaaagcccac
atccactgctccgtgaaagcagaaaactcagtggcggcaaaatccgggggctgtttcccg
ggcttggcgtccgtgtccctcgccgacggtggccggaagtacgttagagacctcacgccg
ggggacagcgtgctggcggtggacgaccaggggactctgacggtcacggacttcatcatg
ttcctggacaaggactcggccaccacgagactcttctacgtcattgaaacggagaccggc
gagcgcctcacgctgacggcggcgcacctgctcttcgtggagagcaacgcgacggacgcg
cgcggccagatgacggcggtgttcgcgagcgccgtgaccgcgggccaaaaggtgttcgtg
ttgcaggagcccaacgacgtcctcacacctgtgaccgttaagaggatttaccggcaggag
catgagggctcattcgccccgctgacggcgcgcggctccctagtggtggaccacgtgctc
gcttcgtgctacgccgtcgtcgaagaccaacagctcgcgcactgggcctttgcgcccgtg
cgcttctcctattggctgtccgggctgcttcacctgcacgtgaagggcgcagccgcccac
gcggacggcgtgcactggtactcagacgtcatgtaccgtctcgggaggtgggtgctgaac
gagcacgccatgcacccgctgggggtgtcgagaccctcgagctga

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