KEGG   Gadus morhua (Atlantic cod): 115537239
Entry
115537239         CDS       T10832                                 
Name
(RefSeq) elongin-B isoform X1
  KO
K03873  elongin-B
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115537239
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gmh04121]
    115537239
   03400 DNA repair and recombination proteins [BR:gmh03400]
    115537239
Ubiquitin system [BR:gmh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     115537239
   Cul5 complex
     115537239
DNA repair and recombination proteins [BR:gmh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     115537239
SSDB
Motif
Pfam: ubiquitin Rad60-SLD
Other DBs
NCBI-GeneID: 115537239
NCBI-ProteinID: XP_030204860
Ensembl: ENSGMOG00000013626
LinkDB
Position
2:complement(2048786..2054026)
AA seq 123 aa
MVGLQDVFLMIRRHKTTIFTDAKESTTVYELKRIVEGILKRSPEEQRLYKDDLLLDDSKT
LGDCGFTNQTARPQGPATVGLAFRLGDDSFEQLRIEAFSSPPELPDVMKPQDSGSTANEQ
AVQ
NT seq 372 nt   +upstreamnt  +downstreamnt
atggtggggctccaggatgtttttctaatgatccgacgtcataagacgaccatcttcact
gatgcgaaggagtccacgacagtatacgagctgaagcgcatcgtggaaggtattcttaag
aggtcgccagaggaacagaggctttataaggatgacctgttgctggacgacagtaaaacg
ctgggagactgtggcttcacaaaccagaccgcccggccccagggtccagccactgtggga
ttagcatttcgtcttggagatgactcgttcgagcagctgcggatcgaggcgttctccagc
cctccggagctccccgacgtcatgaagccccaggactccggcagcacggccaatgagcag
gcggtgcagtga

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