Gadus morhua (Atlantic cod): 115537325
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Entry
115537325 CDS
T10832
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gmh01002
]
115537325 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115537325 (usp48)
Enzymes [BR:
gmh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115537325 (usp48)
Peptidases and inhibitors [BR:
gmh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115537325 (usp48)
Ubiquitin system [BR:
gmh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115537325 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
115537325
NCBI-ProteinID:
XP_030205068
Ensembl:
ENSGMOG00000011011
LinkDB
All DBs
Position
1:1386806..1409765
Genome browser
AA seq
1053 aa
AA seq
DB search
MAPRLQLEKAAWRWVETVKPEDIGREHVELSYRVNVPACRRGTCRRNCKGNPNCLVGIGE
QAWLGEIDENAFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELRRSLYLC
QNPRAQDHNIQLDYEPESICEHLQYLFALLQNSNRRYIDPSGLVKALGLDTGQQQDAQEF
SKLFLSLLEDTLSKQKSTTLQNIIQRQFCGQFSYVTVCNQCGRASPLPSRFYELELNIQG
HKNLNECITEFLKEEKLDGDNRYFCESCQNKQCATRRIKLHSLPRTLNLQLMRFVFDRTT
GHKKKLNTFISFPEQLDMGPFLETPQDQQCVYELSAVLIHRGVSAYSGHYIAHVKDARTS
DWYKFNDEEIEKMEGKKLQLGIEEDIAETVKSQTRKPKCSKGYHCSRNAYMLVYKVQEEE
STDPTANDVQVPGFLQRLVDQDNHKFEEWCTEMAEMRRQSVDKGKAKHEEVKELYELLPV
QDGQPYEFVPLEWLKKWLDDSTATKEMDNSLFLCSHGKLHPDKVGEAKRVSMAAAHILYQ
RYGGGPRLDGSSLCRECVSQRCRVLRLKNQLNEDYREVTNLVKRTLGSGEEGYWVGKSSL
RSWRQLAMEQLEEDEQETMHGSGQTNGQAAHSRINKEYGPHLPEDSEEAMKTFNEDILCT
HGGLSILETERRLVPSAVWIKVRAYFPKAPEFTQRQLPCGQCLTLEQEEKDNEAVSKMMA
QDQKNQLLNLFQEKNRPLLTKWPQGTDTLFIVPMFFVDEWKKFIRRPTKSSPVSSVGNSL
LLCPHGGFMFTYESLINGDFQHVALLWPSEWEVISKLFIVDQAISLHCSGPETATGTTPQ
YTTQPELCWECREGFIFQQQRDLREYTQATIYVRKVIEDKAVVKEAAPELNASSSEAEPE
EEKEELPKADGEGESDFSQSEDGAKRAKMSDGSAATLSTGAMIMGRSGSIRRSTRHRKLR
GEKALIVSASQTLKELKIQIMHAFSVAPFDQNLSIEGKGLTDDSASLGSLGVIPESIVCL
KADEPIADYAAMDDVYQVGMPEEGFKGTGLLGH
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccgtttgcagctggagaaggctgcctggcggtgggtggagaccgtgaagccg
gaggacatcggccgggaacacgtagagttatcttatcgtgtgaatgtgcccgcctgcaga
agagggacgtgcaggaggaattgtaaaggtaaccctaattgccttgtgggtatcggagaa
caggcctggttgggagagatcgatgaaaatgctttccacaacatcgatgaccctaattca
gagcgtcgagacaagaacacatttgtgggcctgacaaaccttggagcaacttgttatgtt
aacacattcctgcaagtatggttccacaacctagagctgcgcaggagcctctacctgtgc
caaaaccctcgcgcccaggaccacaacatccaactagattacgaacctgagtccatttgc
gaacatctccaatatctatttgcactactgcaaaacagcaaccgaagatacattgaccca
tcggggctggtgaaagcactggggctggatacggggcaacaacaggacgcccaggagttc
tccaaactgttcctgtccctgttggaagacaccttatccaaacagaagagcaccactctc
cagaacatcattcagcgccagttctgcggccagttctcctatgttactgtttgtaaccag
tgtggccgagcatcaccccttccgtccagattctacgagctggagctcaacatccaaggc
cacaagaacctcaatgagtgtatcacagagttcctcaaggaagagaagctggacggagat
aaccgctacttctgcgagagctgccagaacaagcagtgtgccacgaggcgcatcaagctg
cacagcctgccgcgcaccctcaacctgcagctgatgcgcttcgtcttcgacaggacaacg
ggccacaagaagaagctcaacaccttcatcagtttccctgagcagctggacatggggccg
ttcctggagaccccacaagaccagcagtgtgtgtacgagctgagtgctgtgctgatccac
cggggcgtgagcgcctactcgggccactacatcgcccatgtgaaggacgcccgcaccagc
gactggtacaagttcaacgacgaggagatcgagaagatggagggcaagaagctgcagctg
ggcattgaggaggacatcgcggagacggtgaaatcccaaacaaggaagcccaaatgcagc
aaaggctaccactgctccaggaacgcctacatgctggtgtacaaggtccaagaggaggag
agcacggaccccaccgcaaacgacgttcaagtgcctggctttctacagcggctggtggac
caggacaaccacaagtttgaggagtggtgcacggagatggcggaaatgcggaggcagagc
gtggacaagggcaaagccaagcacgaggaggtcaaggagctctatgagcttctgcctgtg
caagatggccagccgtacgagtttgtccccctggagtggctgaagaagtggctggacgac
tccactgccaccaaagagatggacaactccctctttttgtgctcgcacggcaagcttcac
ccggacaaggtgggggaggccaagcgtgtgtccatggctgctgcccacatcctgtaccag
cgctacgggggcgggccccggctggacgggtcgtccctgtgcagggagtgtgtgagccag
cgctgcagggttctacgactgaagaaccagctcaatgaggactacagagaggtcaccaac
ctggtgaaacgcacacttggcagcggtgaggagggctactgggttggcaagtcatctctg
cgcagctggagacagctggccatggagcagctggaggaagatgagcaggaaaccatgcat
ggcagtggacagaccaacggacaggcagcacacagccggattaataaagagtacggcccc
catcttcctgaagactcagaggaagccatgaagacctttaatgaagacatcctctgcaca
cacgggggtctgagtattctggagacggagaggagacttgtgccctcggcggtgtggatc
aaggtccgggcctatttccccaaagccccagagttcacccaacgccaactgccctgtggc
cagtgcctgaccctggagcaggaggagaaggataacgaggctgtcagcaagatgatggcc
caagaccagaagaaccagctgctgaacctcttccaggagaagaaccggcctctgctcacc
aagtggcctcagggcacagatactctcttcatagtgccaatgttttttgtggacgagtgg
aagaaattcatcaggaggcccaccaagtcatccccagtgtccagtgtgggcaacagccta
ctcctctgtccccacggcggcttcatgttcacctacgagtccctgatcaacggggacttt
caacatgtagctttgctctggcctagcgaatgggaggtcatcagcaaactgttcatagtg
gaccaggcgatctccctccactgttctggcccggagacggcgacgggcaccacaccacag
tacaccacacagccggagctctgctgggagtgtcgagagggcttcatcttccagcagcag
agggacctgagggagtacacacaggccaccatctacgtccgcaaggtgatcgaggacaag
gcggtcgtaaaggaggccgctcccgagctcaacgccagcagttcagaggcggagccagag
gaggagaaggaggagcttcccaaggccgacggagagggagagagtgacttcagccagagc
gaggacggagcgaagcgagccaagatgagtgacggcagcgccgccacgctcagcacgggg
gccatgatcatggggcgctcggggagtatccggaggagcacgcggcacaggaagctccgg
ggagagaaggccctcatcgtctcagccagccagaccctcaaggagctcaaaatacagatc
atgcacgcgttctctgtggcaccgtttgaccagaatctctccattgagggaaagggtctc
actgacgattcagcctctctgggcagcctgggagtcatccctgagagcatcgtctgtctc
aaggctgatgagcccatagcagattatgcagccatggatgatgtttatcaggtggggatg
cctgaagaaggatttaaaggcactgggctgctgggccactga
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