Gadus morhua (Atlantic cod): 115537327
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Entry
115537327 CDS
T10832
Name
(RefSeq) LOW QUALITY PROTEIN: partitioning defective 3 homolog
KO
K04237
partitioning defective protein 3
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04144
Endocytosis
gmh04517
IgSF CAM signaling
gmh04520
Adherens junction
gmh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115537327
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115537327
09144 Cellular community - eukaryotes
04520 Adherens junction
115537327
04530 Tight junction
115537327
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmh01009
]
115537327
Protein phosphatases and associated proteins [BR:
gmh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115537327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
115537327
NCBI-ProteinID:
XP_030205027
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All DBs
Position
23:12376717..12726607
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AA seq
1448 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGNGTIKVHSLIEQAAMRYKKVIAKDHNYWVQVHRLEHGDGGILD
LDDVLCDVADDKDRLVAIYEEQDPHNGGDGISSTGTQSPEPFPTDLSSTNGSYQPYQTAS
EIEVTPSALLSSMPLHVRRSSDPSLAAPPLGSEAQGLGGPEEPSRKNPARWSTTTGFKYG
HKPGPGAGAGPGAGAGGGTGSLERKGRGAHAYRSLPRDSAWAAQFQRETTRSSLSANHPM
VDRWLDRQEQEEDEEGEVEHMRKDEGRNGRIEPLGRADSSLEHAAMLGLDAMLKPVEVGN
EGGPLGIHVVPLSSVDIRTNGLLVKRLERGGKAEQEGLFQENDCIVRINKADIRHLRFEQ
AQNMFRQAMRTPRILFHVVPAALKAQYEMLSAPASLASPTCNRVRFSQEPQRPPGDRSSV
TPPGGGGLERAQHRTSRTGPPPNAPNHNSHQLPLSRSTPEPGPRYSTGPPALVVRTPPAP
PAPSPSLQRRVSSSLSTGSYSIKSGRRLHVKLRKGPEGLGFSITSRDVPIGGSAPIYVKN
ILPRGAAIQDGRLKAGDRLLEVNGVDLTGKSQEEVVALLRASPMEGTVGLLVLRQEDPLL
PREVKDDEDLMLTPDGTREFMTFEIPLSESGSAGLGVSVKGNRSKESHTTWGIFVKSIMN
GGAACKDGRLRVNDQLIAVNSESLLDMTNQEAMENLRTSMSVEGNKRGMIQLIVARRVAQ
NNEDGTATEGVPLHSSLSDDRERCISHSLYGTIAGLDDVSARCRSTHAHSSNFQLSPTVN
MPQDDIVMIEDDRPPMLPVHLSDQSSSSSHEDMGFVVGNQVPWIHELPSHNECSLSPDTD
ADGSFQREGFGRQSMSEKRTKQFENPAQLEIVKTRKSKSMDLGTSEQEVGPSLGLKKSSS
LESLQTAVAEASLNGDINVHRPRQHINRGRGCNESFRAAIDKSYDTSVAVATEEDIGMET
LDEDTEGSTRSGRDSLSTTGDPHSPVSLGPGRRPRDDGRLQPPPPEQRSRRKKKKEPEAE
EESVDGPGKSPMDGKEREKGRGKKGVLKGLGDMFRFGKHRKDEPPGERMERKGSSKSRAG
DGPTSLDDTVQMRLEQERIQAKTRELRERQAKEREYAEIQEVGGGGGSGGGGRGFSSDEE
HPYAGIGSLDSSVDSGHADSLNSHHHYHLPQSPQMPRTILSPPRDEPPQPPLEALYAQVN
KPRGRRTPPSQDSHVAPNNHDRIQRLRHEFQQALHEEEPEDQVHTFSPDQSWASNGTDGG
RHSVTMDSQVQKQQPEEEEEEEEEEEYQQAQRHYNSLPRQPHKNPSTASQDPWERSTPPG
ETFQTAKDNPRYSSYQGSRNNNNGYLGATGFNARVLLETQELLRQEQRRRDQQQQQEQEA
GHARSPAPQDRESCTPAPGSVCSSSSGSSMAGTQSHKGPYRQDVPPSPSQLARLGRHHSS
EKGRQFYS
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacggtgtgtttcgggaggactcgtgtggtcgtcccctgcggaaatgggact
ataaaagtgcatagtcttatcgaacaagcggctatgagatataaaaaggttatcgccaag
gaccataactactgggtgcaggtccacaggctggagcatggagacggaggcatcttggac
ctggatgacgtgctgtgtgatgtggcagacgacaaagataggctggtggccatctacgaa
gagcaggacccccacaacggtggggatgggatcagctccacgggcacccagagccctgag
cccttccccacggacctcagctccaccaacggctcctaccagccctaccagaccgccagc
gagatcgaggtcaccccgtccgccctgctctccagcatgccgctccacgtgcgccgcagc
agcgacccctcgctggcggccccacccctgggctccgaggcccaggggctgggggggccg
gaggagccgtccaggaagaacccggcccgctggtccaccaccacgggcttcaagtacggc
cacaagccgggccccggcgctggtgctggtcccggtgccggggccgggggtggcaccggc
agcctggaacgcaaggggcggggagcgcacgcctacaggagcctgccacgggactccgcc
tgggcggcccagttccagagagagaccacccggtcgtctctcagcgccaaccatcccatg
gtggaccgctggctggaccggcaggaacaggaagaggacgaggaaggggaagtggagcac
atgaggaaggacgaggggaggaatggacggatagagccgttgggaagggcggactcgtcg
ctggaacacgccgccatgttgggtttagatgcgatgctgaagccggttgaggtgggcaac
gaaggagggcccctggggatccacgtggtgccgctcagctctgtggacatcaggaccaac
ggccttctggtgaagcgtctggagcggggtggcaaggccgaacaggagggcctgttccag
gagaatgactgcatcgtgcgcattaacaaggcggacattcgacacctgcgattcgaacaa
gctcagaacatgttccggcaggccatgcggaccccgcgcatcctcttccacgtggtgccg
gctgccctcaaggcccagtacgagatgctgtcggccccggcctcgctcgcctcgcccacc
tgcaaccgggtccgcttcagccaggagcctcagcgtccgcccggcgaccgctccagcgtg
acccccccggggggcgggggcctggagcgggcccagcacaggacgtcccgcaccgggcca
cccccgaacgcccccaatcacaacagccaccagctccctctgtcacggagcaccccggag
cccggaccccgctactccaccggccccccggccctggtggtccggacacccccggccccc
ccggccccgtcgccctccctgcagcgcagggtcagcagcagcctctccaccggctcctac
tccatcaagtccggccgcaggctccacgtgaagctgaggaaaggtcccgagggcctgggc
ttcagcatcacctccagagacgtccccatcggcggcagcgcccccatctacgtcaaaaac
atcctcccgcgtggcgctgccatccaagatggccgcctgaaagctggtgacaggctgtta
gaggtgaacggtgtggatctcaccggtaagagccaggaggaggtggtggccctgctccgt
gcgtcccccatggaggggacagtgggcctgctggtgctccgccaagaagaccccctgctg
cccagagaagtgaaggacgacgaggacctgatgctgacgcccgacggcacgcgggagttc
atgacctttgagatccctctgagtgagtcgggctcggccggcctgggggtcagcgtcaag
ggcaaccgctccaaggagagccacacgacctggggcatcttcgtcaagtccatcatgaac
ggcggcgcggcctgcaaggacggacgccttcgcgtcaacgaccagctgatcgccgtcaac
agcgagtctctgctggacatgaccaaccaggaggccatggagaacctccgcacctccatg
tccgtggagggcaacaagagggggatgatccagctcatcgtggcgcgacgggtggcccag
aacaacgaggacggtacggcaacggagggtgttcccttgcactcctcgctgtctgacgac
cgagagcggtgcatctcgcactccctctacggcaccatcgccggcctggacgacgtctcg
gctcgctgcagaagcacacacgcacactcgtctaacttccagctctcccccactgtcaac
atgccccaggatgacatcgtcatgatcgaagacgataggccgcccatgcttcctgtccac
ctctccgaccaatcgtcttcgagttcccacgaggacatgggctttgtggtggggaaccag
gtgccctggatccacgagctgcccagtcacaatgaatgctcgctgagcccggacacggac
gcagacggctccttccagcgggagggcttcgggcgccagagcatgtcggagaaacgcacc
aaacagtttgagaaccccgcccagctggagatcgtcaagacgcgcaagtccaagagcatg
gacctgggaacctcggaacaggaagtgggaccctcgctcggcctgaagaagtccagctcc
ctggagagcctccagacggccgtggcggaggcgtcgctcaacggcgacatcaacgtgcac
aggccacgccaacatatcaatcgggggcggggctgcaacgagagcttccgggcggccatc
gacaagtcgtacgacacgtccgttgccgtggccacagaggaggacatcggaatggagacg
ttggacgaggacacagagggcagcacccgctcagggagggactccctctccaccacgggg
gacccccactcccccgtgtccctcgggccggggcgtcgtccacgggacgacggcaggctg
caacccccgcccccggagcaacgcagccggaggaagaagaagaaggagccggaagcagag
gaagagtcagtcgatggaccggggaaaagccccatggacggcaaagagcgggaaaagggc
cgaggcaagaaaggcgtgctgaagggcctgggcgacatgttcaggttcggtaagcaccga
aaggacgagccccctggggagaggatggagaggaaggggtccagtaagtcccgggccggc
gacggtcccacctccctggacgacaccgtgcagatgaggctggagcaagaacggatacaa
gccaagacgcgggagctgcgggagcgccaggcaaaggaacgggagtacgccgagatccag
gaggtgggcggcggcggcgggagtggcggcggggggcggggcttcagctcggacgaggag
cacccctacgcgggcatcggctcgctggactcttcggtggacagcggccacgccgactcc
ctcaacagccaccaccactaccacctgccccagagcccccagatgccccgcaccatactg
agccccccccgggacgagcccccccagccccccctggaggccctgtacgcccaggtcaac
aagccccggggccgacgcactccccccagccaggacagccatgtggctcccaacaaccat
gaccggatacaaaggttgaggcacgagttccagcaggccttacacgaggaagaaccggaa
gaccaggtccacaccttcagcccagaccagtcctgggccagcaacgggacagacggcggg
cgccattcggtgacgatggacagccaggtccagaagcagcagccggaggaggaggaggag
gaggaggaggaggaggaataccagcaggcccagagacactacaactccctgccccgtcaa
ccccataagaaccccagcaccgcttcccaggacccctgggagaggtctaccccccccggg
gagaccttccagacggccaaggacaacccccgctactccagctaccagggctcgcgcaac
aacaacaacggctacctgggcgccacgggcttcaacgcccgggtcctgctggagacccag
gagctactgaggcaggagcagcgccgccgggaccagcagcagcagcaggagcaagaggcc
ggccatgcccgctcgcctgcaccgcaggacagggagtcttgtactccagccccaggctcc
gtctgcagctccagctcgggctccagcatggccggcacccagtcccataaaggcccctac
aggcaggacgtgcccccgtccccctcgcagctggccaggctgggccggcaccacagctcg
gagaagggcaggcagttctactcctga
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