Gadus morhua (Atlantic cod): 115537349
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Entry
115537349 CDS
T10832
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gmh04054
]
115537349
Pattern recognition receptors [BR:
gmh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
115537349
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
TIR_2
LRR_9
LRR_1
LRR_LRWD1
ThsB_TIR
Peptidase_C37
LIM_bind
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
115537349
NCBI-ProteinID:
XP_030205060
Ensembl:
ENSGMOG00000027403
LinkDB
All DBs
Position
23:7115268..7124251
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AA seq
955 aa
AA seq
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METIIAMPLRGFFFCSFGILYLFFNSSFCPTTGYVLKNCLVTLNTQAICQKNSFKVFPKD
IPARVTIIDLSQNRISILNKTPLANLSNLLRLDLRHNLISKIESGTFVVQMSLEVLIINN
NMLCKLEEGMFDGLVNLTELSLTFNNIDTIAPASFKSLSKLRFLDLGHNKLRNLGNILHH
TPHLQTLYITANHISTFHSWELSNKSTELVTLDLSKNELMAFRLTADIFPNLTSLNLEDG
LKNGIVWEVNDTSYLSGVSKLDISAVRSSLHELQEVLGTINSSLRYLKLNHMNNNLQDLI
DFSCKNPSLSSLEIRNNGIKVIGSDMLNLCTNLYLLDLGENEITKISDNSFQSLWQLKVL
IIKSNQLTSVPYAIRNTGISTLDLSSNNINGLDCDDFANMTYLIILHLNNNPLLALNNCV
SKDLVNLKILMLQNSRISHLNSTFKKDMPNLEVLTLFNNQLAVLDYGEFKALDNLQNLSL
QGNKLEQLKNGTFFGLSSLTYLNLESNEITEIANGTFGDLKALKTLNLMSNHIIYESEEP
IDYPPFAELSNLDTLLISSQRRHHRFNLPQNFLKGLKNLSVLNIKGNKLTSLHPLTFIDT
PNLNKIDLSGNYLTDIPDNLFSPIQKLKSLYISHINLRSLDFLLHANFSELEFLQVGNNS
FSVIREQVILSLSALNYLNMQGNSFTCNCDNAWFLKWVITNKQTQVFDAYNFECNYPPDL
KGKKLLQIDVHSCTVDTDFICYISTACAVIMTIAVAFTHHFLQWHLVYGYYLMLAFLYNS
KHKNKRAHQYDAFVSYNANDEGWVLGELLPKLEDEQGWRLCLHHRDFQPGKPIMENITDA
IYGSRKTICVVSADYLESEWCSREIQVASFRLFDEQKDVLILVFLEDIPMQQLSPYYRMR
RLLKRKTYLSWSRADAHPDLFWEKLRQALDTQEHPMGEHLRLTVEDGPTGERPDQ
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgataattgctatgccattaaggggattttttttctgttcatttggaatatta
tatttattttttaacagttctttttgtcccactactggctacgtgctgaagaactgcttg
gtcacactgaacacacaggccatttgtcagaagaacagtttcaaagtatttccaaaggac
attccagcaagagtcacaataatagacctgtctcaaaacagaatttctatactaaataaa
acacctttggcaaatttatcaaatctgttgcgcttagacctgagacacaacttgatctcc
aagattgaatctggcacttttgtggttcaaatgtctctagaggtgttgattataaacaac
aatatgctttgtaagctagaggagggtatgtttgatggattagtcaatctcacagaattg
agtctgactttcaataacattgacacaatagcaccggcctctttcaagtctctgagcaaa
cttaggtttttggacctaggccacaacaaactgcgcaacttaggaaatatcttacatcat
acaccacatttacaaaccctgtacattacagcaaaccacatttccacttttcattcatgg
gagctatcaaataagtctacagagcttgttacacttgatttgtctaaaaatgagcttatg
gcctttaggctcactgcagatatatttcccaacctcacaagcttgaaccttgaggatggt
ttaaagaatggtatcgtctgggaggtgaatgacacatcgtaccttagtggtgtgtccaaa
ctagatatcagtgcggttcgctcctcattacatgaactgcaggaagttctagggacaatt
aactcctcactgaggtatctgaagttgaaccatatgaataacaacctgcaggatctcatc
gatttttcctgcaaaaacccatcgctgagctctttggaaatccgaaataacggcatcaaa
gttataggttcagacatgctgaacctgtgtactaatctgtatcttttggatttaggggaa
aatgagataactaaaatctctgacaattcgtttcaatctctttggcagcttaaagtttta
atcataaagtctaaccaactcacatcggtcccctatgccataaggaacaccggaatctca
acactggatctcagctccaataacatcaatggccttgactgtgatgattttgccaatatg
acctatctcataattctccatctaaacaataatcctcttttggctctcaacaattgtgtt
tccaaagatttggtcaatttaaagatattaatgttgcaaaacagccgtattagtcactta
aacagcaccttcaaaaaagacatgccaaatcttgaagtgcttactttatttaacaatcaa
ctcgctgttctagattatggagaatttaaagctctggataacctccagaatctgtcatta
caggggaataaattagaacaacttaaaaatgggactttttttggactgtccagtcttaca
tatcttaatctcgaatcaaatgaaataactgaaattgcaaacgggacttttggtgacttg
aaagctttaaagacattgaatttgatgagcaatcacattatatatgaatcggaagagcct
attgattatccaccatttgctgagctttccaacctggatacattgctcatttcatctcaa
cgcagacaccataggttcaacctccctcaaaactttctgaaaggcctgaaaaatctctcg
gtactcaatatcaagggtaacaagcttacatccctgcacccactcaccttcatcgatact
cctaatttgaataagattgatttgtctggtaattatttaacagacattccagacaatttg
ttttccccaattcaaaaactaaaaagtctttacatttcacatataaacctgaggtctcta
gattttctgctccatgctaacttctcggagctggagttcttgcaggtggggaataattct
ttttctgtgattagagagcaagtgatactgtctctgtcagcacttaattacctgaatatg
cagggtaatagcttcacctgtaactgtgacaatgcatggttcctcaaatgggtaatcacg
aacaagcaaacacaagtgtttgatgcgtacaactttgaatgcaactaccctccagacctc
aaaggaaaaaaactgttgcagattgatgtccattcttgtacagtagacacggacttcatc
tgttatatttccacggcatgcgcggtcatcatgaccatagcagtcgccttcacccaccat
ttcctacaatggcatctggtctacgggtactacctcatgctggcgttcctctacaactca
aagcacaagaacaagcgtgctcatcaatatgacgccttcgtctcctacaacgcaaacgac
gagggctgggtgctgggggagctgctgcccaagcttgaggacgagcagggctggagactg
tgtctgcaccaccgagacttccagccaggtaaaccaatcatggaaaacataacagacgcc
atttatggcagccggaaaaccatctgtgtggtcagtgctgattacctggagagtgaatgg
tgctccagagagatccaggttgccagcttccgtctgtttgacgagcagaaggacgtgctg
atcctggtgttcctggaggacattcccatgcagcagctgtctccgtactaccgtatgagg
aggctcctgaagagaaaaacctacctgagctggtcccgcgcagacgcacacccagacctg
ttctgggagaagctccggcaggccctggacacccaggagcacccaatgggtgagcatcta
cggctcaccgtggaggacggccccactggagagagaccagaccagtaa
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