Gadus morhua (Atlantic cod): 115537585
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Entry
115537585 CDS
T10832
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Domain-containing proteins not elsewhere classified [BR:
gmh04990
]
Other domain-containing proteins
Patched domain-containing proteins
115537585 (ptchd1)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115537585
NCBI-ProteinID:
XP_030205453
Ensembl:
ENSGMOG00000026249
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Position
23:7264181..7273841
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AA seq
1048 aa
AA seq
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MVGVPGLSGRRWERLEPRPRARMLRQVLQAGLGGSFHALGRFVASHPVFFASAPMLLSIL
LGASFSRYRVEENVEYLLAPKHSLAKIEGNLVESLFPVNRSKHALYSDLQTPGRYGRVIV
TARKGSVLDPVHLDTILTLHRRLYQMQVTVPASSASSFNYSFSSLCLPDDNNACIIDDII
RSMQGIQAARAANHTPPPLKYPITRLADGRQAYIGHQLGGVQGWGPMAKGDGVRSARALQ
LTYYLQAHTSLMDKVAGQWEMAFCAELQHFGAAHPKLGLYPSTSSSLRTDFQHSSVLARR
PLLISLGLCSVLAVLCCSMRDCVRAKPWLGLLALLSITLSGLTAAGILNLTGATYNSTYL
GIPFVMLGHGLFGSFEMLSSWRRTREDQHVKDRVAAVFEDVMLRFSGSTLLHLTALGLAA
SPLTNMEAVRLFCRTASLGVAVGYVYTLSLYGSCLVFTGYLETGYRHGCFCRRVPKPERL
DAKPAWYRCLMYTRYEEETAGPHASPPRSYAHDNAHGNAHGDAHGNAHGDAVHGNVNVHG
NVNVHGNVNAHAHRNAHGNAHGNAHGNAIGHSAVNSGATHVHAGSLQGAHGNSHVTHSTA
AHMHAHPHSHPHMHPHVHAGAAPPLSALGPDPHPHPQDSHLLLGCMRRCYGDWITNTYVK
PFVVLLYLVYISFGLMGFMQVTQGSDPSALVAMDTATVLYARAQQRYFSSYSPVIGFYIY
ESAPYWNASVQRDLLEYTKGFQRISWLESYLGYLSELNQSTSQPRHNFTRTLRLHFLRQP
RYAHFADDIIFAERGAGEEPEVAASRVFLVAKTTENKREEMSVLLDTLRRLSLTSRVRFL
IFNPSFVYLDRYAAAVGWPLRHSLLAVLFLLGLASLALVEPLVAAWLGLTLLSVQFGVVG
FMTLWGVELDCVSVLCLISTLGHAADCSAPLLCGFAGGRGESRTRWVRVALERHGVASLQ
ALLCYAAALAPVACVRSNLTRTIFRCLALAAGCSALHTLAFLPTLLTFLPPAKSKDAPGG
RGPGSPRQEVECVEMNDSTRVVDQITTV
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcgttcccgggctgtccggtcgacggtgggagaggctcgagccgcggccgcgc
gctaggatgctgcgccaggtgttgcaggcgggcctggggggctccttccacgcgctgggt
cgcttcgtcgcgagccacccggtgttcttcgcctccgcgcccatgctgctctccatcttg
ctcggcgcgagcttcagccggtaccgcgtggaggagaacgtcgagtacctgctcgcgccg
aagcacagcctggcgaagatcgagggcaacctcgtggagagcctgttccccgtgaaccgc
tccaagcatgcgctttactccgacctgcagacccccggccgctacggacgcgtcatcgtc
accgcgcgcaagggcagcgtgctggatccggtgcacctggacaccatactgacgcttcac
cgccggctgtaccagatgcaggtcacggtgccggccagcagcgccagcagcttcaactac
tccttctcctcgctctgcctgccggacgacaacaacgcctgcatcatcgacgacatcatc
cgctccatgcagggcatccaggcggcccgcgccgccaaccacaccccgcccccgctcaag
tacccaatcacgcggctggcagacgggcggcaggcctacatcggccaccagctcgggggg
gtgcagggctggggccccatggccaaaggggacggcgtgcgttcggcgcgcgccctccaa
ctcacctactacctccaggcgcacaccagtttgatggacaaggtggccggccaatgggag
atggccttctgcgcggagctgcagcatttcggcgcggcgcaccccaagctgggcctgtac
ccgtccacgtcgtcgtccctgcggaccgacttccagcactcctcggtgttggcgcggcgc
cccctgctgatcagcttggggctgtgcagcgtcctggcggtgctgtgctgctccatgagg
gactgtgtgcgggccaagccctggctgggcctgctggcgctgctgtccatcacgctgtcg
ggactcaccgccgcggggatcctcaacctgaccggggccacgtacaactccacctacctg
ggcatccccttcgtcatgctgggccacgggctcttcggctccttcgagatgctgtcgtcg
tggcgacggacgcgggaggaccagcacgtgaaggaccgcgtggcggccgtcttcgaggac
gtgatgctgcgcttctcgggctccaccctgctgcacctgacggcgctgggcctggccgcc
tcgccgctcaccaacatggaggccgtgcgcctcttctgccgcacggcctcgctgggcgtg
gccgtgggctacgtgtacacgctgtcgctgtacggctcctgcctggtgttcaccggctac
ctcgagacgggctaccgccacggctgcttctgccgccgcgtgcccaagcccgagcggctg
gacgccaagccggcctggtaccgctgcctcatgtacacgcgctacgaggaggagacggcc
ggccctcacgccagcccgccgcgcagctacgcgcacgacaacgcgcacggcaacgcgcac
ggcgacgcgcacggcaacgcgcacggggacgccgtgcacgggaatgtgaacgtgcacggg
aatgtgaacgtgcacgggaatgttaacgcgcacgctcataggaacgcccacgggaacgcc
cacgggaacgcccacgggaacgccattggtcactcggcggtcaattccggcgccacgcac
gtgcacgccgggagcctccagggcgcccacggcaacagtcacgtgactcactcgacggcg
gcacacatgcacgcgcatcctcactcccacccgcacatgcaccctcacgtgcacgccggg
gcggccccccctctgtcggccctcggcccggacccccacccacaccctcaggactcccac
ctgctgctgggctgcatgcggcgttgctacggcgactggatcaccaacacctacgtgaag
cccttcgtggtgctgctgtacctcgtttacatctccttcggcctcatgggcttcatgcag
gtgacccagggctccgaccccagcgccctggttgccatggacacggccacggtgctgtac
gcgcgggcccagcagcgctacttcagctcctactcgccggtcatcggcttctacatctac
gagagcgccccctactggaacgcctcggtgcagcgggacctgctggagtacaccaagggc
ttccagaggatcagctggctggagtcctacctgggatacctgtcggagctcaaccagtcc
accagccagccgcgccacaacttcacccgcacgctgcgcctccacttcctgcgccagccg
cgctacgcccacttcgccgacgacatcatcttcgccgagcggggcgcgggcgaggagccc
gaggtggcggcgtcgcgcgtcttcctggtcgccaagacgacggagaacaagcgggaggag
atgtcggtgctgctggacacgctgcggcggctgtcgctgacgtcgcgcgtgcgcttcctc
atcttcaacccatccttcgtgtacctggaccgctacgcggcggccgtgggctggcccctg
cgccactccctgctggccgtgctcttcctgctgggcctggcctccctggcgctggtggag
cccctggtggccgcctggctgggcctgacgctgctgtcggtgcagttcggcgtggtgggc
ttcatgaccctgtggggggtggagctggactgcgtgtcggtgctctgcctcatctccacg
ctgggccacgccgccgactgcagcgcccccctgctgtgcggcttcgcggggggccgcggg
gagagccggactcgctgggtgcgcgtggcgctggagcggcacggcgtggcctccctgcag
gcgctgctctgctacgccgccgcactggcgcccgtggcgtgcgtgcgctccaacctcacg
cgcaccatcttccgctgcctggcgctggcggcgggctgctcggcgctgcacacgctggcc
ttcctgcccacgctgctcaccttcctgccgcccgccaagtccaaggacgcgccgggcggg
cgggggccgggcagcccccggcaggaggtggagtgcgtggagatgaacgacagcacgcgg
gtggtggaccagatcaccaccgtctga
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