Gadus morhua (Atlantic cod): 115537695
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Entry
115537695 CDS
T10832
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gmh04054
]
115537695
Pattern recognition receptors [BR:
gmh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115537695
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
PRY
WHD_NOD2
LRR_6
SPRY
Motif
Other DBs
NCBI-GeneID:
115537695
NCBI-ProteinID:
XP_030205601
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All DBs
Position
23:complement(20254192..20268821)
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AA seq
1075 aa
AA seq
DB search
MEMNQEELADKLGSGAVAVQWQHELKAHLKKKFHCVFEGIARAGEQRPLNEIYTEIFITE
RGSGEVNKEHEVRLIEKASRKTANEETPIRCEDIFKPGQDKPIRTIMTTGVAGIGKTLLT
HKFTLDWAEGKANQDIDFAFLLTFRELNLLKGKEFSLLELLHQFSVETKESGIYRYDHDQ
VVFILDGLDECRLPLDFQNNPIWTDVTEPTSVDVLLTNIIRGVLLPSARIWITTRPAAAN
QIPAECVDMVTEVRGFTDPQKEEYFRKRFREGTMATTIISHVKKSRSLHIMCHIPVFCWI
TATVLVDFFKTSQRGEEVPKTVTQMYSHFLRVQSIQGDRKYHGRAETDPQWSSESREIIV
SLGKLAFNQLEKGQLIFYEADLAECDIDIRAASLYSGVFTQIFKEECGLHQDRMFCFIHL
SIQEFLAALYVFLSFINTGVNLLSEEHPTSREAELLPLYQSAVDKALQSENGHLDLFLRF
FLGLSLETNQMLLQGLLGPRGIKLLDNLTKNVPSGQTGRRSQINNQIVHYIKEKIGGDLS
QERSINLFHCLNELNDTSLVEEIQQYLTSGSLSTESLSSAQWSALVFIVLTSEEQLDVFY
LKKYSASDEGLLGLLPLVKASKTSLLNSCKLSERCCKALASVLSSNSSSLRELDLSNNDL
QDSGVKLLSAGLGSPHCTLETLRLNVCHLSERCCEALASVLSSNSSRLRELDLSTNDLQD
SGVKLLSAGLGSPHCTLETLRLSGCLVTQEGCASLASALSSNPSHLIELDLSYNHPGDSG
AALLSAGLEDPHWRLDTLSVEHGEVWRLKPALKKYACELTLDPNTANGQLSLSEDSRKVT
LVEEDQSYPDHPERFDSYPQVLCREGLPGRCYWEVEWGGEVDIGVAYRGMKRREGGNDGV
LGLNNKSWSLVCDDDNAAAVYTAYHNGSRTAIRLPPPRSNRVGVYLDRPAGSLSFYRVSP
GGGGSSDTLTHIHTFQASFTQEVLLPGFMLDKSGSVSLGVSIVDTQTHTQTQKKNRKART
DAPLKMPPMTIISPRRGSTLGHGASQRGQLVVAVHSVHFWWTNPKETSTIPTVSK
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaccaggaggaactggccgacaagctgggcagtggagctgttgcggtccag
tggcaacatgaactcaaggctcatctgaagaagaagttccactgtgtgtttgagggaatc
gctagagcaggagagcagagacctctgaatgagatctacacagagatcttcatcacagag
agaggcagtggagaggtcaacaaggaacacgaggtcagactgattgaaaaggcatccagg
aaaacagccaatgaggaaacaccaatcagatgtgaagacatctttaaacctggacaagat
aaaccaatcagaacaataatgacaaccggagtggccggcattggtaaaactctcttaacc
cacaagttcactctggactgggcagaaggcaaagccaaccaagacatagacttcgcattt
ctcctcactttcagagagctgaatttactgaaagggaaagagtttagcttactggaactt
cttcatcagttttctgttgaaaccaaagaatcaggaatctacagatacgaccatgaccaa
gtagtcttcatcttggatggtctggatgagtgtcgacttcctctggacttccagaacaac
ccgatctggactgatgtcaccgaaccgacctcagtggatgtgctgctgacaaacatcatc
aggggagtcctgcttccctctgcccgcatctggataaccacacgccctgccgcagccaat
cagatccctgctgagtgtgttgacatggtgacagaggtgagagggttcacagacccacag
aaggaggagtacttcaggaagagattcagagaggggacaatggccaccacaatcatctct
cacgtcaagaaatctcgaagcctccacatcatgtgtcacatcccagtcttctgttggatc
actgctacagttctagtggacttcttcaaaacatcccagagaggagaagaggtgcccaag
accgtgactcagatgtacagccacttcctgagggttcagtccatacagggggacaggaag
tatcatgggcgagctgaaaccgatccacaatggagttcggagagcagggagatcattgtt
tctctggggaaactggcttttaaccagctggagaaaggccagctgatcttctacgaggca
gacttggcagagtgtgacatcgatatcagagcagcctcactgtactcaggagtgttcacg
cagatctttaaagaggagtgtggactgcaccaggacaggatgttctgcttcatccatctg
agcatccaggagtttctggctgccctttatgtctttctgtccttcatcaacactggtgtc
aacctgctctcagaagaacatccaacctccagggaagctgaactccttcccctctaccag
agtgctgtggacaaggccttacagagtgagaacggacacctggacttgttcctccgcttc
ttcctgggcctctctctagagaccaatcagatgctcctacaaggtctgctgggaccaaga
ggaattaaattactggacaatctaacaaaaaacgttccatcggggcagacaggaaggagg
tcacaaatcaataaccaaatagtccattacatcaaggagaagataggtggagatctctct
caagagagaagcatcaatctgttccactgtctgaatgagctgaatgacacttctctagtg
gaggagatccaacagtacctgacatcaggaagtctctccactgaatctctctcctctgct
cagtggtcagctctggtcttcatcgtactgacatcagaagagcagctggacgtgttttac
ctgaagaaatactctgcttctgacgagggtcttctggggctgctgccattggtcaaagcc
tccaaaacttctctgctgaacagctgtaagctgtcagagagatgctgtaaagctctggcc
tcagttctcagctccaactcctctagtctgagagagctggacctgagtaacaatgatctg
caggattcaggagtgaagctgctctctgctggactggggagtccacactgtacactggaa
actctcaggctgaatgtctgtcatctgtcagagagatgctgtgaagctctggcctcagtt
ctcagctccaactcttctcgtttgagagagctggatctgagtaccaatgatctgcaggat
tcaggagtgaagctgctctctgctggactggggagtccacactgtacactggaaactctc
aggttgtctggctgcctggtcacacaggaaggctgtgcttctctggcctccgctctgagc
tccaacccttcccatctgatagagctggacctgagctacaatcacccaggagactcagga
gctgcgctgctctctgctggactggaggatccacactggagactggacactctcagtgtg
gagcacggtgaagtgtggaggctgaaaccagctctaaagaagtatgcctgtgaactcaca
ctggacccaaacacagccaacggacaactctctctgtctgaggacagcaggaaggtgacg
ctggttgaagaggaccagtcgtatccggatcacccagagaggtttgactcctacccccag
gtgttgtgtagagaggggctgcctggccgctgctactgggaggtagagtggggaggagag
gttgatataggagtggcatacagaggaatgaaaaggagagaagggggtaatgacggcgtg
cttggattgaacaacaagtcctggagtcttgtttgtgatgacgacaatgctgctgctgtc
tacactgcctatcacaacggtagtagaacagccatacgtctccccccccctcgctctaac
agagtaggagtgtatctggaccggcccgctggctctctgtccttctacagagtgtcccca
ggtggaggagggtcctcagacacactgacacacatccacaccttccaggcctccttcacc
caggaggtcctcctccctgggtttatgttagataagagtggttcagtgtctctgggagtg
tccattgtagatacacaaacacacacacagacccaaaaaaagaatagaaaagcacgcaca
gacgctcccttgaagatgcctcccatgaccatcatctcccccaggcggggctccacgctg
ggccacggggcgtcccagagagggcagctcgtcgttgctgtccacagtgtccacttctgg
tggaccaaccccaaggaaacatcaacaatccccacagtaagtaagtaa
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