Gadus morhua (Atlantic cod): 115537704
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Entry
115537704 CDS
T10832
Symbol
grin2c
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04020
Calcium signaling pathway
gmh04080
Neuroactive ligand-receptor interaction
gmh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115537704 (grin2c)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115537704 (grin2c)
04082 Neuroactive ligand signaling
115537704 (grin2c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmh04040
]
115537704 (grin2c)
Ion channels [BR:
gmh04040
]
Ligand-gated channels
Glutamate (ionotropic)
115537704 (grin2c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
115537704
NCBI-ProteinID:
XP_030205611
Ensembl:
ENSGMOG00000012436
LinkDB
All DBs
Position
2:23590638..23644076
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AA seq
1528 aa
AA seq
DB search
MGVRPGPLSDSLWWPPPPSRRPPLRLLPLLLLLLLTGAPCCRARPFGVPTPAVNVAVVFS
GSAYQQEIKGRLSRENFLDLPLEVNPITVLVNNTNPRALLTRICDTLTANRVHGVVFEDN
VGSEAVAQILDFISTQTAVPIVGISGGSAVVLPYKGEGSTFLQLGSSIEQQINGMFKVME
EYNWDSFVVVTSLYPGYEAYVDYIKSSSDTSYFLWDLQEVLTFDMSADGTNDLRARRLLQ
QVDTQVLLVYCSHDEAQYLFTMAAQAGLMGPGYIWILPSIAVGNPDVMPPESFPVGVISI
ITDRWRTSLRKRVRDGVAIVVKGAQSFQKQRGYVPEGHSDCQSPVKPSNNDTLFRHMLSV
SWENNDFSFNSDGYLVNPSMIIITLDRERQWDKVGTYEMGILQMRYPVWPRYGTYLEPVS
DNRHLTVATLEERPFVIVESVDPVTGTCVSNTVPCRRQSNKTETIVGHTEPYTKLCCKGF
CIDILKKLSRNIKFSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERS
EIIDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYC
SPVGYNRSLISAKDPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAV
IFLASYTANLAAFMIQEQYIDTVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIRSNYP
EMHSHMVKYNQKGVEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATT
GYGIALQKESRWKRPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSTKLDIDNMAG
VFYMLLVAMGLSLLVFSWEHLLYWKLRHSVRDSDRLDFLLGISRGIYSCFNGVEESDHNG
SLQNPDVTANYTQANMLKMLRTAKDIVSSARVENSLDNATKTLESWSRRGGADGARVAGP
PARIATSAADMCHVGGRVPYISSISDHPPMFPQRSLTPTLPGGGGGHYGDSGLVQPLLLD
QARGRPVPLRYTLPARGGAAAGHMLERTLPISSLSSPHLAMRDPGTPGGAAPHPHHHHHH
LLHHHGGSGGRLYLDGQPRHHHHLPVAAAAAATAASSSAYLPYREFQVPDIYVEHRGALR
RKFSYPPDCVSRKKRPHSYVFDGGPRPNDYDEPTACLAELRANHLLGNHAPLVATATAAA
AAAAHYPGHAASCNSCMKPYLEAYPEPDGDDAPLLGMDKMNRRASFLKATWGGDRIRQVD
ETKASAGAGAGAAGASASPATRALVGEVPDLFPRGVVTAARAKQPKHHAAQRHKMYGSLG
NNLSCFPLAAEPAYLDPAHMGSFPYKQKLRYYESTGRLPSYREALLHNLPPTAAATATLR
RSSSSATVVHRHYSTYLNAYTDLPVYVGPLAQGHAHFYDATKDACHLFPCGGGGGGGLGH
AHCPETVALAQARAAAGGGGGGGGADRGASAGGPGQNSVLMRSYDGSGTREELGGACGNR
ERRQVLVAHRVNIVPKPWGRVSSLESEV
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcgtccaggacccctgagcgactccctgtggtggccgccgccgccatcacgc
cgccccccgctacgactcctccctctcctcctcctcctgctgctcaccggcgccccctgc
tgccgcgcccggcccttcggcgtgcccacgccggcggtgaacgtggcggtggtgttcagc
ggctcggcctaccagcaggagatcaagggccggctgagccgcgagaacttcctggacctg
ccgctggaggtgaaccccatcacggtgctggtgaacaacaccaacccccgggcgctgctc
acgcgcatctgcgacacgctcacggccaaccgcgtgcacggcgtggtgttcgaggacaac
gtgggctcggaggccgtggcccagatcctggacttcatctccacgcagacggccgtgccc
atcgtgggcatcagcgggggctctgccgtcgtgctgccctataagggcgagggctccacc
ttcctgcagctgggctcgtccatcgagcagcagatcaacggcatgttcaaggtgatggag
gagtacaactgggacagcttcgtggtggtcaccagcctgtacccgggctacgaggcctac
gtggactacatcaagtcctcctcggacaccagctacttcctgtgggacctgcaggaggtg
ctgaccttcgacatgtcggccgacggcaccaacgacctgcgcgcccggcgcctcctccag
caggtggacacccaggtgctgctggtgtactgctcccacgacgaggcccagtacctcttc
accatggccgcccaggccggcctcatggggcccggctacatctggatcctgcccagcatc
gccgtgggcaacccggacgtgatgcccccggagagcttcccggtgggggtgatcagcatc
atcacggaccgctggcgcaccagcctgaggaagagggtgagggacggcgtggccatcgtg
gtgaagggcgcgcagagcttccagaagcagcgcggctacgtgcccgagggccacagcgac
tgccagagccccgtgaagccgagcaacaacgacacgctcttcagacacatgctgagcgtg
agctgggagaacaacgacttctcgttcaacagcgatggatacttggtcaacccctccatg
atcatcatcactctggacagagagaggcagtgggacaaggtggggacctacgagatgggc
atcctgcagatgcgctacccggtgtggccgcgctacggcacctacctggagccggtgtcg
gacaaccgccacctgaccgtggccacgctggaggagcggcccttcgtcatcgtggagtcg
gtggaccccgtcactgggacctgcgtcagcaacaccgtaccctgccgccggcagtccaac
aagaccgaaaccattgtgggccacacagagccctacaccaagctgtgctgcaagggcttc
tgcatcgacatcctgaagaagctgtcgcgcaacatcaagttctcctacgatctgtacctg
gtcaccaacggcaagcacggcaagctggtccgcgggatctggaacgggatgatcggcgag
gtgttctacaagcgtgcagacatggccatcggctcgctgaccatcaacgaggagcgctcc
gagatcatcgacttctccgtgcccttcgttgagacgggtatcagcgtcatggtcgcccgt
agcaacggcaccgtgtccccctccgccttcctggagccctacagcccggccgtctgggtg
atgatgttcgtgatgtgtctcaccgtcgtggccatcaccgtgttcgtgttcgagtactgc
agtcctgtcggctacaaccgcagcctcatctccgccaaagatcccgggggccccaccttc
accatcggcaagtcggtgtggctgctgtggggcatcgtgttcaacaactcggtgcccatc
gagaaccccaagggcaccaccagcaagatcatggtgctggtgtgggccttcttcgccgtc
atcttcctggcctcctacacggccaacctggccgccttcatgatccaggagcagtacatc
gacaccgtgtccggcctcagcgacaagaagtttcaaaagccgcaggagcagtaccctccg
ttccgctttgggacggtcccaaatggcagcacggagaggaacataaggagcaactacccg
gagatgcactcgcacatggtcaagtacaaccagaaaggggtggaggacgccctgaacagt
ctgaaaacagggaagctggacgcgttcatctacgacgcggccgttctgaactacatggcc
ggcaaggacgagggctgcaagctggtgacgatcggcagcggaaaggtcttcgccaccacg
ggctacggcatcgccctgcagaaggagtcccggtggaagcgtcccatcgacttggcgctg
cttcagttcctagcagatggcgacacgcagaagctgcagacggtgtggctgacaggcatc
tgtcgcaacgagaagaaggaggtgatgagcaccaagctggacatcgacaacatggccggg
gtgttctacatgctgctggtagccatggggctcagcctgttggtcttctcctgggagcac
ctgctctattggaagctgcggcactcggtgcgcgactcggaccgcctcgacttccttctg
ggcatcagtaggggcatctacagctgcttcaacggcgtggaggagagcgaccacaacggc
agcctgcagaaccccgacgtcacggccaactacacgcaggccaacatgctgaagatgctg
aggacggccaaggacatcgtgtcgtcggcgcgcgtggagaactccctggacaacgccacc
aagacgctggagagctggagccggcggggcggggccgacggtgcgcgggtcgccggcccg
ccggcccgcatcgccacctcggcggcggacatgtgccatgtcggcggccgcgtgccctac
atctccagcatctcggaccacccgcccatgttcccccagaggtcgctcacgccgaccctg
cccggcggcggggggggccactacggggacagcgggctggtccagcccctgctgctggac
caggcccggggccggcccgtcccgctgcgctacaccctcccggcgcgggggggcgcggcc
gccggccacatgctggagaggaccctccccatctccagcctcagcagcccccacctcgcc
atgcgggacccgggcacccccggcggcgccgccccccacccccaccaccaccaccaccac
ctgctgcaccaccacgggggcagcgggggccggctctacctggacggccagccccggcac
caccaccacctcccggtcgccgccgccgccgccgccacggccgcctcctcctccgcctac
ctcccctaccgggagttccaggtgcccgacatctacgtggagcaccggggggcgctgcgc
cggaagttcagctacccgcccgactgcgtgagccgcaagaagcggccgcacagctacgtg
tttgacggcgggccgcggcccaacgactacgacgagcccaccgcctgcctggccgagctg
cgggccaatcacctgctggggaaccacgcccccctggtggccaccgccaccgccgccgcc
gccgccgccgctcactacccgggccacgccgccagctgcaactcctgcatgaagccgtac
ctggaggcgtacccggagcccgacggggacgacgcgccgctgctggggatggacaagatg
aaccgccgcgcctccttcctcaaggccacctggggcggcgaccgcatccggcaggtggac
gagaccaaggcctcggcgggggcgggggcgggcgcggcgggggcgtcggcctccccggcc
acccgggcgctggtgggggaggtgccggacctgttcccccgcggcgtggtgacggcggcg
cgggccaagcagcccaaacaccacgcggcccagcggcacaagatgtacggcagcctgggc
aacaacctgtcctgcttccccctggcggccgagcccgcctacctggaccccgcccacatg
ggctccttcccctacaagcagaagctgcgctactacgagtccacgggccggctgccgtcg
taccgcgaggcgctgctccacaacctgccgcccacggccgccgccaccgccaccctgcgg
cgctcctcgtcctcggccaccgtggtgcacagacactactccacctacctgaacgcctac
accgacctgcccgtgtacgtggggccgctggcgcagggccacgcccacttctacgacgcc
accaaggacgcctgccacctgttcccctgcggcggcggcggcggcggcgggctgggccac
gcccactgccccgagacggtggcgttggcgcaggcccgcgcggccgccgggggcggcggc
ggtggcggcggggcggacaggggggcatcggcgggggggccaggccagaacagcgtgctg
atgcggagctacgacggctcggggacgcgggaggagctgggaggggcgtgcgggaacagg
gagaggcggcaggtgctggtggcccaccgggtgaacattgtgccaaagccctgggggagg
gtctccagcctggagtccgaggtgtga
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integrated database retrieval system
