Gadus morhua (Atlantic cod): 115538455
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Entry
115538455 CDS
T10832
Name
(RefSeq) LOW QUALITY PROTEIN: syntaxin-binding protein 5-like
KO
K08518
syntaxin-binding protein 5
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Membrane trafficking [BR:
gmh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115538455
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
115538455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115538455
NCBI-ProteinID:
XP_030205870
LinkDB
All DBs
Position
Unknown
AA seq
1150 aa
AA seq
DB search
MKKFNIRKVLDGLTASSSSSAPAAPGSRDSELVQESLQSEHFQLCKTVRHGFPHQPSSMT
FDPVQKILAVGTLGGALRLFGRSGVECYCQHESGAAVIQLQFLINEGALVSALADDSIHL
WNLRQKQPAILHSLKFSKERITYCHLPFQSKWLYIGTXRGNIHIVNVESFTLSGYVIMWN
KAIELSTKSHPGPVVHISDNPMDEGKLLIGFECGIVVLWDLKCKKADYRYSYDEAIHSVA
WHHEGKQFVCSHSDGTLTTWNVRVTAKPIQTITPHGKQPKDGKKPEPCKPILKVEYKTTR
AGDAFMVLSGGLSYDTVGRRACLTVMHGKSTTVLEMDYPIVEFLTLCETPYSNDVQEPYA
VVVLLEKDLVVIDLGQIGYPIFESPYPLSIHESPVTCCEYFADCPAELIAALYSVGSRQK
RQGYSKKEWPISGGNWGQGTQSYPEIVITGHADGSLKFWDASALMFQMLYKLKTAKVFER
PRSKEDKPSTELVEEDPFAIQTLSWCPESRILCVAGVSAHVLVYRFSKQEVTTEEVQMLE
VRMQSDLSDVESPEPAGDQTPTLPTPGAASSSPQEGEPPLQAATGSTPSDLPRGNVPCLQ
VRGSPLKQSPGYQVDLVVQLVGVSGEPPQQITSLAHNSSYGLVVLGNSGGLAVVDYLQRT
VLLNMGTSELYTPSDPYQRQPRSPRKTRHPSGALCDGNDGPTASEDRCKSPTSGSASPCN
SDEEPKQQRFLALVKTKSRRFSKTVSSDFAKISRKINSSTEQKPDTDAKDSSFSRSRSSS
VTSIERESXEVISSFHFCETFPRKVTEGGPGPCLMVGTSQGAVLLLDLSLPPAADQRLSQ
PVGVSSCGTLVRLKGGVMTMALLDAAGALLPPAYEPWYDPNASDEDKEKERSRRRXADVP
AASQEGGAADGQYAVVCLEKQATVVAMPSQTAVFKHNITESSFVLRADVVQMAASNCIAC
FCANGHIMTLSLPSLRPLLDVNYLPLTDMRIARTFAFSNLGQALYLTSPAEVQRITYSQE
TCDNLQEMLCELFTPVETPEAPNRGFFKGLFGGGAQSLDREDLFGEDRCGEGLPQSGQHI
PGPGGMEGMKGAASGVVGDLAXRRIALDERGQKLGELEERTAAMMASADSFSKHAHDMML
KYKDKKWYQL
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacatcaggaaggtgctggacggcttgacggcgtcttcttcctcgtcc
gccccggcggcaccggggagccgagacagcgagctggtccaagagagtcttcagtcggag
catttccagctttgcaagactgtgcgtcatggctttccacatcaaccatcctccatgacc
tttgaccctgtgcagaagatcctggccgtggggacgctgggtggagcattgagactgttt
ggccgttctggcgtggagtgctactgccagcacgagagtggagccgccgtcatccagctg
cagttcctcatcaatgagggggcgctggtgagtgccttagccgacgacagcattcacctg
tggaacctgaggcagaagcagcctgctattctgcattccctaaagttcagcaaggagagg
atcacgtactgccacctgcccttccagagtaagtggctgtacatcgggacgnngaggggg
aacatccacatcgtcaacgtggagtccttcaccctctcgggctacgtcatcatgtggaac
aaagccattgagctatccaccaagtcccaccctggccctgtagtccacatcagtgacaac
ccaatggacgaaggcaagcttctgattggttttgaatgtgggatagtggtgctgtgggac
ctcaagtgtaaaaaggctgactaccgctacagttacgatgaggccatccactcggtggcc
tggcaccacgaggggaagcagtttgtgtgcagccactctgacggcaccctgaccacttgg
aatgtacgagtcaccgccaagcctatccagaccatcacaccacatggcaagcagcccaaa
gacgggaagaaaccagaaccctgcaagcccatcctcaaagtggagtacaagaccacgcgg
gccggggacgccttcatggtgctgtcgggggggctgtcctacgacacggtggggcgcagg
gcctgcctcaccgtgatgcacggcaagagcaccactgtgctggagatggactaccccatc
gtagagttcctcacgctatgtgaaactccatactccaacgacgtccaggagccgtatgct
gtggtggtcctgctcgagaaggatttagtggtgatcgacctcggacaaattggctacccc
atattcgagtctccgtaccccctgagcatccacgagtcgccggtgacctgctgtgagtac
tttgccgactgccccgccgagctgatcgcagcgctgtactcggtgggctccaggcagaag
agacagggttacagcaagaaggaatggcccattagtggtggaaactggggccaggggacc
cagagctacccggagatagtcatcactggacatgccgatggctcccttaagttctgggac
gcctctgctttaatgttccaaatgctgtacaagctgaaaactgccaaagtgttcgagagg
ccccgaagcaaggaagacaagccgagcacagagctggtggaggaggatccctttgccatc
cagaccctttcctggtgccctgagagcaggatactgtgcgtggccggagtctctgcccac
gtcctcgtctataggttcagcaagcaggaagtcaccacagaagaagtgcagatgctggag
gtgcgcatgcagagtgatctgagtgatgtggagtccccggagccagcgggggatcagacc
cccacactgcccaccccgggggccgcctcctccagcccccaggagggagagccccccctg
caggccgccacaggcagcaccccgtcggacctgccccgcggcaacgtgccatgtctccag
gtgcgtggctctcctctgaagcagtctccaggctaccaggtggacctggtggtccagctg
gtgggggtgagcggcgagcccccccagcagatcaccagcctggcccacaactcctcctac
ggccttgtggttttgggtaacagtggtggtctggccgttgtggattacctccagcgcacg
gtgctcctcaacatgggcacgtcggagctctacaccccctcggacccctaccagaggcag
ccgcgctccccccgcaagacccgccacccctctggagcgttgtgcgacggtaacgacggc
cccacagcctcagaagaccgctgcaaatcgcccacttcaggatctgcctctccctgcaat
tcagacgaagagccaaagcaacaaaggttccttgctctggtgaagacaaagagcaggcgc
ttctccaagacggtgtccagtgactttgccaagatctcaaggaaaataaattcctccact
gagcaaaagccagacactgacgccaaggacagctccttcagccgctcccgcagctccagc
gtcaccagcatcgagcgcgagtccngtgaggtcatctcctccttccacttctgcgagacg
ttcccccgcaaggtgacggagggcgggccgggcccctgcctgatggtgggcaccagccag
ggtgcggtgctgctgctggacctcagcctgccccctgcggccgaccagcggctctcccag
cccgtgggcgtgtccagctgcggcaccctggtgcgactgaagggtggggtgatgaccatg
gctctcctggacgccgctggcgcactgctgccccctgcctatgagccgtggtacgacccc
aacgcctcggacgaggacaaggagaaggagcggagcaggaggcgcngggccgacgtcccg
gccgcctcccaggagggcggcgcggcggacgggcagtacgcggtggtgtgcctggagaag
caggccacggtggtggccatgccctcccagacggccgtcttcaaacacaacatcaccgag
agctccttcgtgctgcgggccgacgtggtgcagatggccgccagcaactgcatcgcctgc
ttctgcgccaacgggcacatcatgaccctgagtttgcccagcttgcgccccctgctggac
gtcaactacctgcctctcaccgacatgcggatagcacggacgtttgccttctccaacctg
ggccaggcgctgtacctgacctcccccgcggaggtgcagaggatcacctacagccaggag
acctgtgacaacctccaggagatgctgtgtgagctgttcacccctgtggagacaccagaa
gctccgaaccgaggcttcttcaagggcctgtttgggggaggggctcagtccctggaccgg
gaagatctcttcggagaggaccgctgcggggaaggcctcccgcagtctggccagcacatc
ccgggtcccgggggcatggagggcatgaagggagctgcgtcgggggtggtgggggacctg
gccnngcgccgcatcgccctggacgagagaggacagaagctgggcgagctggaggagcgc
acggcggccatgatggccagcgccgactccttctccaaacacgctcacgacatgatgttg
aagtacaaagacaagaagtggtaccagctctga
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integrated database retrieval system
