Gadus morhua (Atlantic cod): 115539029
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Entry
115539029 CDS
T10832
Symbol
casz1
Name
(RefSeq) zinc finger protein castor homolog 1
KO
K25209
zinc finger protein castor
Organism
gmh
Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115539029 (casz1)
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115539029 (casz1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_CASZ1
zf-C2H2_CASZ1_1
RNA_polI_A34
Phage_YorO
Motif
Other DBs
NCBI-GeneID:
115539029
NCBI-ProteinID:
XP_030206087
LinkDB
All DBs
Position
Unknown
AA seq
1109 aa
AA seq
DB search
MASTPTSFAASSIMEKLSASKGLISPMMARLAAAALKPSGGHDTGSGQPSSAGRFNLVQV
KQEPMEGGPLGVPHSDSMQEHSLDLSKKDHSNESNGHAGAGNTSLLSSLMNKMSQVNPAL
FSAMHLKTELDGPGPDGSEAAQYLSRIMRRQQAERPAEIWRTYLRRFDTEDFCEAQCDFL
QKVHFHCLVEDCGALFSTVDGAVKHANFHLRASMKVKSEPSLCDSLKECSSDGTPLQPAA
PVSMANSPMMDVANLSSTGGYGSPPPPSSSSSSSLLAWKQLTGSVPPQMPAAMPNLPANS
ALATTSLENAKPQVKPGFLQFQENDPCLATDCKYSNKFHFHCLFGNCKYVCKTSGKAESH
CLDHINPSNNLVNVRDQFSYFSLQCLCPNQHCEFRMRGHYHCLRPGCYFVTNITTKLPWH
VKKHEKAERRAANGFKYFTKREECGRSGETRGQSCKYNQLNSHFHCIREGCQFSFLLKHQ
MTSHARKHMRRMLGKNFDRVPSQAMSLGGQRSEDMQHLTSGPTGGQQAGLNSGYGGLMDD
TDDYMDYMGGASPLGLSSESSNQDRSCSSTPVGNEGSPAGNTISIPTATGAKKRFWIIED
MSPYGKRSKTASSRKMLDEGMMLEGFRRYDLYENCKDLNCQFSLKVTHYHCTRENCGYKF
CGRTHMYKHAQHHDRVDNLVLDDFKRFKSTLSCHFPDCQFSGNSTHFHCLRCGFRCTDST
KVTAHRKHHGKQDVITAAGFCQFSSSADCEVADCKYKLKCSHFHCTFPECRHTVVGMSQM
DSHKRKHEKQERGGGELTASPGGQEAGRHHHHHPHPQPHHPHHPQHQQHHHLHPHPHPHH
GGLGGGLGGMPHAATSSSSSSAMAAAGMALSGPSPAGLHGLVHGSSAGSPLMYPPVSMAS
EYGHAYPPPPPAVSLDGSLNLDGSLNLGADAAGSSLFFLKSAAAAGLGLGDSLDLSKKMH
HSSAIMAAAAAAAAAGSHHHHQPRPQHPHPLPLHHHHHLLHGAEQQQPPQDGPARGTSGH
TEDDLSPEEGAPAGEEEEEEEDEEEDEEDEEEEEDEEAEEDLNTDSNDDSMPGPDAGKDN
GERFHAPVNHSDTPQGEEPGATPAAAPGL
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacgcccacctccttcgccgcctcgtccatcatggagaagctgtcggccagc
aaggggctgatctcgcccatgatggcgcgcctggccgccgccgcgctcaagccctccggc
ggccatgacacagggagcggtcagccttcctcggccggccggttcaatctggtccaggtg
aagcaggagccgatggagggggggccactgggggtcccccactcggactccatgcaggaa
cacagtctggacctcagcaagaaggaccacagtaatgaatcaaacggccacgctggggcg
gggaatacatctcttttatcctcgcttatgaataagatgtcccaggtgaacccagccctg
ttcagcgccatgcacctgaagacggagctggacggcccggggcccgacggctcggaggcc
gcccagtacctgagccgcatcatgaggcggcagcaggctgagaggccagccgagatctgg
aggacctacctgcgcaggttcgacacggaggacttctgcgaggcgcagtgtgacttcctg
cagaaggtccacttccactgcctcgtggaggactgcggggcgctcttcagcaccgtggac
ggcgccgtcaagcacgccaacttccacctgcgggcgtccatgaaggtgaagtcagagccc
tcgctctgcgactccctgaaggagtgctcctcggacgggacgccgctgcagcccgccgcg
cccgtctccatggccaacagccccatgatggacgtggccaacctgtcgtccacggggggc
tacggctccccgccgccgccctcctcctcctcctcctcctcgctgctggcctggaagcag
ctgacgggcagcgtgcccccccagatgccggccgccatgcccaacctgccggccaactcg
gcgctggccaccacctccctggagaacgccaagccccaggtcaagcccggcttcctgcag
ttccaggagaatgacccatgcctggccaccgactgcaagtactccaacaagttccacttc
cactgtctgttcgggaactgcaagtacgtgtgcaagacgtcgggcaaggccgagtcccac
tgcctggaccacatcaaccccagcaacaacctggtcaacgtgcgcgaccagttctcctac
ttctccctccagtgtctctgtcccaaccagcactgtgagttccggatgcgcggccactac
cactgcctgcgccctggctgctacttcgtcaccaacatcaccaccaagctgccgtggcac
gtgaagaagcacgagaaggccgagcgccgcgcggccaacggcttcaagtacttcaccaag
agggaggagtgcggccggagcggtgagacgcggggacaaagctgtaagtacaaccagctc
aacagccacttccactgcatccgcgagggctgccagttctccttcctgctgaagcaccag
atgacctcgcacgcacgcaagcacatgcgcaggatgctggggaagaactttgacagggtc
ccgtcccaggccatgtccctgggaggtcagaggtcggaggacatgcagcacctgacctcc
gggccgacggggggccagcaggccggcctgaactcggggtacgggggcctcatggacgac
accgacgactacatggactacatgggcggggccagtcccctggggctgtcctcggagtcc
tccaatcaggaccgcagctgctccagcacccccgtggggaacgagggctcccccgcaggc
aacaccatctccatcccgacggcgacaggcgccaagaagcgcttctggatcatcgaggac
atgtcgccgtacggcaagcgcagcaagacggcgtcctcgcgcaagatgctggacgagggc
atgatgctggagggcttccggcgctacgacctctacgagaactgcaaggacctcaactgc
cagttctccctgaaggtcacccactaccactgcacgcgcgagaactgcggctacaagttc
tgcggccgcacgcacatgtacaagcacgcgcagcaccacgaccgcgtggacaacctggtg
ctggacgacttcaagcgcttcaagtccacgctcagctgccacttccccgactgccagttc
tcgggcaacagcacgcacttccactgcctccgctgcggcttcaggtgcaccgacagcacc
aaggtgaccgcgcaccgcaagcaccacggcaagcaggacgtgatcaccgccgccggcttc
tgccagttcagctccagcgccgactgcgaggtcgccgactgcaagtacaagctcaagtgc
tcgcacttccactgcaccttccccgagtgccggcacacggtggtgggcatgtcccagatg
gactcccacaagcgcaagcacgagaagcaggagcgcggcggcggagagctcacggcctcc
ccgggagggcaggaggcgggccgccaccaccaccaccacccccaccctcagccccaccac
ccccaccacccccagcaccaacagcaccaccacctccacccacacccccacccccaccac
ggggggctgggcggggggctgggcgggatgccccacgccgccacctcctcctcctcgtct
tccgccatggcggcggccggcatggcgctctcgggcccctcccccgccggcctccacggc
ctggtccacgggagcagcgcgggctcgcccctgatgtacccgcccgtcagcatggcgtcc
gagtacggccacgcctacccgccgccgccgccggccgtgagcctggacggctcgctgaac
ctggacggctcgctgaacctgggcgccgacgccgccggcagctcgctgttcttcctgaag
agcgcggcggcggctggcctgggcctcggcgactcgctggacctcagcaagaagatgcac
cacagctcggccatcatggccgccgccgccgccgccgccgccgccgggagccaccaccac
caccagccccgcccccagcacccccaccccctccccctccaccaccaccaccacctgctc
cacggggcggagcagcagcagcctccgcaggacggcccggcccgcgggacgtccggccac
acggaggacgacctctcccccgaggagggcgcccccgctggcgaggaggaagaggaggag
gaggacgaggaggaggacgaggaggacgaggaggaagaggaggatgaggaggcggaggag
gacctcaacaccgactcgaatgacgactcgatgcccgggccggacgcagggaaggacaac
ggggaacgctttcacgctcccgtcaaccacagcgacacgccccagggggaggagcctggg
gccacgcccgcggccgcgcccggcctctag
DBGET
integrated database retrieval system
