Gadus morhua (Atlantic cod): 115539692
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Entry
115539692 CDS
T10832
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh02010
ABC transporters
gmh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115539692
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115539692
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmh02000
]
115539692
Transporters [BR:
gmh02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
115539692
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
115539692
NCBI-ProteinID:
XP_030206307
Ensembl:
ENSGMOG00000011477
LinkDB
All DBs
Position
3:complement(8484372..8521015)
Genome browser
AA seq
2271 aa
AA seq
DB search
MAVSTQLGLLLWKNFTFRRRQTVQLLVEIVWPLIIFFILISVRSHYPAYEQHECHFPNKA
MPSAGTLPWLQGIICNANNPCFRYPTPGETPGVVGNFNDSIISRLFVDAKKILLFTQNDR
SMEGYKGLVRALAKLQKKTAGFKLKDFLKDDETLSQFLHHNASLPHHALRQILEADVNLE
KVLTKGFGFHLRDLCNATSLEEFVHIADGKVSQLTQDIICNSSSDWLDSAQSHFLSNLDF
LKPIRKDVRSDPKVVQDVSLATDSLLESLGSLAVELASMDSWRDLRQEVQYLSSPLPQGS
PGLVYQAVSRIVCGHPEGGGLQIKSLNWYEDNNYKALFGHHGNDSDNEPTTAYDNTSTPY
CNSLMKTLEASPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGG
MWEEMKPKVWNFLENSSEMDMVRTLLQNNASAAFFNNRLGDTQWTVEDVSHFLSKTAEVV
GEGAKRAGGYTWREVFNETDQAILTVSRFMECVNLDKLEPVANEERLVNKSMGLLSNQKF
WAGIVFPDIAHGNASDLPANVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWG
GFSYLQDVIEQGIIRAVTGSKEKTGVYFQQMPYPCFVDDVFLRVMSRSMPLFMTLAWMYS
VAIIIKGVVYEKEARLKETMRIMGLDNGTLWLSWFISSLIPLLVSAALLVVLLKMGNLLP
YSDPGVIFLFLSCYAVVTIMQCFLISTLFSRANLAAACGGIIYFMHYLPYVLCVAWQDYV
NYTAKVLVSVLSPVAFGFGCEYFALFEEQGVGIHWSNLLNSPLEEDSYNITTSMCIMMAD
AVLYGLLTWYIEAVFPGMYGIPRPWYFPFTRTYWCGEKQNTNVAGSEGDHGNAEAVCVEE
EPSHIEPGVYIKNLVKVYNHGNKLAVDGLTLGFYEGHITSFLGHNGAGKTTTMSILTGLF
PPTSGTAYIMGKDIRTELSSIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEKVKA
EMEQIVNDMGLPHKRQSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGI
WDLLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLV
KRDYDLPLQSCRNSASTVSYSKKKEDSVSESSSDAGLGSEPESETTTIDVSLISNVIFKH
VPEARLVEDLGHELTYVLPHQSAKDGAFVELFHEIDDRLSYLGISSYGISDTTLEEIFLK
VAEDSGVDAAELSADGVLPTRSRRRHAFGDHQSCLKPFTEDDFEFNDSEESRETDWLGGA
DGKGSFQVKGWTLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCVALVFSLIVPPF
GKYPSLALDPGMYEEQFTFISNDAPEDLHASRLQGALMDNPGFGTRCMETGPSRDEACAA
LEEDWSLPDISASVRDMLENGNWTMDHPSPLCQCSCDGQKKMLPECPAGAGGMPPPELRV
TVTDTLQNLTGRNVSDYLVKTYAQIISKSLKNKLWVNEFRYGGFSLGARSAQYLPPSDDV
DEAVAQLRRRFRLERGTSADRFFRSLSSFIQGLDTKNNVKIWFNNKGWHSMGSFLNVMNN
GILRASLPRGKNPAHYGITAFNHPLNLTKEQVSQAALMTTSVDVLVSICVIFAMSFVPAS
FVVFLIQERVNKAKHMQFISGVQPVLYWVANFVWDMCNYVVPATLVILIFVCFQQEAYVS
STNLPVLALLLLFYGWAITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELF
GSNEVGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMSDALERFGENRFRSPLAWDMVGK
NLFAMAVQGVVFFCITLLIQYRFCLKNRWSTSHVKPVGEEDEDVARERQRIMGGGGQTDI
LELRELTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSDVTSGEAF
LAGKSVTTEMDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRK
LGLVKYVDKAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPKARRALWNAILSII
KEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPD
LRPVMSFIETELPGSNLKEKHRNMLQYQLPSALTSLARIFSLLSGHKEALSIEDYSVSQT
TLDQVFVNFAKDQSDEDHLKDLLLAKRDAVAVDVSKLTSFLVDEKHRESCV
NT seq
6816 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctctactcagcttggtttactgctgtggaagaacttcacgtttcgccgcaga
cagaccgtccaactcctggtggagatcgtgtggcctctgatcatcttcttcatcctgata
tccgtgcggtcacactacccagcctatgagcaacatgagtgccacttccccaacaaggcg
atgccgtcagcgggcaccctgccctggctgcagggcatcatctgcaacgccaacaacccc
tgcttccgctaccccacaccgggagagaccccgggcgtggtgggcaacttcaacgactcc
ataatctctcgtctgtttgtggacgctaagaagatcctgctcttcacccagaatgaccgc
agcatggagggctacaaggggctggtccgggccctcgcaaagctccagaagaagaccgca
ggttttaagctgaaggacttcctgaaggacgatgagacattgtctcagttcctgcaccac
aacgcgtccctccctcaccacgcactacgacagatcctagaggctgatgttaacctggag
aaggtgctgaccaaagggttcggcttccacctgcgggatctgtgcaacgccacgtccctg
gaggagttcgtccacatcgccgacggcaaagtgtcccaactcacacaggacatcatctgc
aactcctcaagcgactggctagacagcgcccagagtcacttcctgtccaacctggacttc
ctcaaacccatcaggaaggatgtgaggtcggaccccaaagtggtacaggacgtttccctg
gcaacggacagccttctggagagcctaggatcactggctgtggagctggccagtatggac
agctggcgggacctccgtcaggaggtgcagtacctgagctcccccctgccccagggctcc
cccgggctggtctaccaggccgtgtcccgcatcgtgtgcggtcaccctgaggggggcggc
ctgcagatcaagtccctcaactggtacgaggacaacaactacaaggccctgttcggtcac
catggcaacgacagcgacaacgagcccaccaccgcctacgacaacacctccaccccctat
tgtaacagtctgatgaagactctggaggccagcccgatctccaggatgatctggagagct
ctgaaaccgctgctgatgggaaagatcctgtacacccccgacacgcccgctacacagcgc
atcatacacgaggtaaacaagaccttccaggagctgggggtgctgagggacctggggggc
atgtgggaggagatgaaacccaaggtgtggaacttcctggagaacagcagcgagatggac
atggtccggacgctgctccagaacaacgcaagcgcggcgttcttcaacaatcgcctgggc
gacacccagtggaccgtggaggacgtgtcccacttcctgtccaagacagcagaggtggtg
ggggagggggcaaaacgggcggggggctacacctggagggaggtcttcaacgagactgac
caggccatccttaccgtctcccgcttcatggagtgtgtgaacctggacaagctggagcct
gttgctaacgaggagcggctggtcaacaagtccatgggactccttagcaaccagaagttc
tgggcgggcatcgtgtttcccgacatcgcccacggcaacgcctcagacctgcccgccaat
gtcaactacaagatccgcatggacatcgacaacgtggagcgcaccaataagatcaaggac
gggtactgggaccccggtcccagggcggacccctttgaggacctgcgctacatctggggc
gggttctcctacctgcaggacgtgattgagcagggcatcatccgggcggtcaccgggtcc
aaggagaagaccggggtctacttccagcagatgccctacccctgcttcgtagacgacgtc
ttcctgcgtgtgatgagtcgctccatgcccctgttcatgaccctggcctggatgtactcg
gtggccatcatcattaagggcgtggtctacgagaaggaggcgcggcttaaggagaccatg
cggatcatgggattggacaacggcaccctgtggctcagctggttcatcagcagcctcatc
cccctgctggtcagcgccgccctgctggtggtcctgctcaagatggggaacctgctgccc
tacagcgacccgggggtcatcttccttttcctgtcgtgctacgccgtggtgaccatcatg
cagtgcttcctcatcagcacgctgttctcccgcgccaacctggcggcggcgtgcgggggc
atcatctacttcatgcactacctgccctacgtactgtgtgtggcctggcaagactacgtc
aactacaccgccaaggtcctggtgagcgtcctctccccggtggcgttcggcttcggctgt
gagtactttgcgctgttcgaggagcagggcgtgggcatccactggtccaacctgctgaac
agccccctggaggaggacagctacaacatcaccacctccatgtgcatcatgatggccgac
gccgtgctctacgggctcctcacctggtacatcgaggccgtcttccccggcatgtacggc
atccccagaccctggtacttccccttcaccagaacctactggtgtggagagaagcagaac
accaacgtcgccggctctgagggcgaccacggcaacgccgaagccgtgtgcgtggaggag
gagccgtcgcacatcgagccgggcgtgtacatcaagaacctggtgaaggtgtataaccac
ggcaacaagctggccgtggacgggctgacgctgggcttctacgaaggacacatcacctcc
ttcctgggacacaatggagccggcaagaccaccaccatgtcgatcctgaccggcctgttc
ccgcccacctctggcaccgcctacatcatggggaaggacatacgcaccgaactcagcagc
attcgccagaacctgggagtctgcccccagcacaacgtcctgttcagcatgctgacggtg
gaggagcacatctggttctacgcccgtctgaagggcctgtcggaggagaaggtgaaggcg
gagatggagcagatcgtcaacgacatgggcctgccgcacaaacgccagtcacgcaccagc
accctctccggtgggatgcagaggaagctgtccgtggccctggccttcgtcggggggtca
aaggtcgtgatcctggacgagccgaccgccggggtggacccgtacgcccgcaggggcatc
tgggacctgctgctgaagtaccgccagggtcgcaccatcatcctgtccacgcaccacatg
gacgaggcggacatcctgggcgaccgcatcgccatcatctcccacgggaagctgtgctgc
gtgggctcctccctgttcctgaagacccagctggggacgggctactacctgaccctggtg
aagagggactacgacctgccgctgcagtcctgccgcaactccgccagcaccgtgtcctac
agcaagaagaaggaggacagcgtgtcggagagcagctctgacgccgggctgggcagtgaa
ccagagagtgaaaccaccaccatcgacgtgtccctgatctccaacgtgatcttcaagcac
gtccccgaggcgcggctggtggaggacctgggacacgagctcacctacgtgctgccccac
cagtcggccaaggacggcgcctttgtggagctcttccacgagatcgacgaccgcctctcc
taccttggcatctccagctacggcatctccgacaccaccctggaggagatcttcctcaag
gtggctgaggacagcggcgtagacgctgcagaactctcagccgacggtgtgttgcccacc
cgatcccgccggcgccacgcgttcggagaccaccagagctgcttgaagcccttcacagag
gatgactttgaattcaacgactcagaagaatctcgcgagacggactggctgggaggggcc
gatgggaaggggtccttccaagtcaaaggttggacgctgaagaggcagcagtttgtggca
ttactatggaaacgcttcctgtacgcccgacgctcccgcaaaggattcttcgcccagatt
gttctgcctgctgtgtttgtgtgtgttgcactggtcttcagtctgatcgtgcctccgttt
ggaaagtacccgagcctggctctggacccggggatgtacgaagaacagttcaccttcatc
agtaacgacgctccagaggacctccacgccagcagactgcagggggcgctgatggacaac
cctggcttcgggacgcgctgcatggagacaggaccgtcgcgggatgaggcgtgtgcagcg
ctggaagaggattggtcgttgcctgacatatcggcctcggtgcgggacatgttggagaat
gggaactggaccatggaccacccctcccccctctgccagtgttcctgtgatggacagaag
aagatgctgcccgagtgtcccgccggagcaggaggaatgcccccccctgagctaagggtc
actgtgacggacacgctgcagaacctgacagggaggaatgtctccgactacctggtcaag
acctacgcccagatcatcagcaagagcttgaagaacaagctctgggtgaatgagttcagg
tacggtggcttctcattgggcgcaaggagtgcccagtacctcccccccagcgatgacgtg
gacgaggctgtggcccagctcaggagacgcttccgcttggagaggggaacctctgctgac
cggttcttccgcagtctgtccagcttcatccagggtctggacacaaaaaataatgttaag
atctggttcaacaacaagggatggcacagtatgggctccttcctcaacgtgatgaacaac
gggatcctgcgcgccagcctgccccgggggaagaaccccgcccactacggcatcaccgcc
ttcaaccaccccctcaacctgaccaaggagcaggtgtcccaggccgccctgatgaccacg
tcggtggacgtcctggtgtctatctgtgtgatcttcgccatgtccttcgtgccggccagc
ttcgtggtgttcctgatccaggagagggtgaacaaggccaagcacatgcagttcatcagc
ggggtgcagcccgtcctctactgggtggcgaacttcgtctgggacatgtgtaactacgtg
gtccccgccacgctggtcatccttatattcgtgtgcttccaacaagaggcctacgtgtcc
tccaccaacctgccggtgctggccctgctgctgctgttctacgggtgggccatcactccc
ctgatgtacccggcctccttcttctttaagatccccagcaccgcctatgtggtcctgacc
agcgtcaacatcctcatcggcatcaacggcagcgtctccaccttcgtgctggagctgttc
ggcagcaacgaggtgggcggcatcaacgacatcctgaagaacgtgttcctcatcttcccc
cacttctgcctgggccgcggcctcatcgacatggtgaagaaccaggccatgtcggacgcg
ctggagcgctttggtgagaaccggttccgttctccactggcctgggacatggtcgggaag
aacctgttcgccatggctgttcagggcgtggtcttcttctgcatcactctgctcatccaa
taccgcttctgcctcaagaacaggtggagcaccagccacgtgaagccggtgggggaggag
gacgaggacgtggcccgggagaggcagcggatcatggggggcgggggccagacggacatc
ctggagctccgggagctcaccaaggtctacaagcgcaagcagaagcctgccgtggaccgc
ctgtgtgtgggcatcccccccggggagtgctttggtctgctgggtgtgaacggagctggg
aagaccagcaccttcaagatgctaacgggagactctgatgtgaccagcggtgaagctttc
ctggccggcaagagcgtaactacggagatggacgaggtccaccagaacatgggctactgc
ccccagtttgacgccatcaacgaccttctgacgggccgcgagcacctggagttctacgcc
atcctgaggggggtccccgagaaggaagtctgtgaggtggcggagtggggcatcaggaag
ctggggctggtgaagtacgtcgacaaggcggcaggaagctacagcggaggaaacatgagg
aagctgtcgaccgccatggctctgatcgggggacccccggttgtcttcctggacgagccg
actacagggatggaccccaaggccaggagggcgctctggaacgccatcctcagcatcatc
aaagagggccgctcggtcgttcttacctctcacagtatggaggagtgtgaagcgttgtgc
actaggatggccatcatggttaacggcaggttccgttgccttggcagcgtccagcaccta
aagaacaggttcggggacggctacaccatcatcctgcgggtggcgggacccgacccggac
ctgcgtcccgtcatgagcttcatcgagacggagctgccgggctccaacctgaaggagaag
caccgcaacatgctgcagtaccagctgccctccgccctcacctccctcgcacgcatcttc
tccctcctctccggacacaaggaggccctcagcatagaggactactccgtgtcccagacc
accctggaccaagtgtttgtgaacttcgccaaggaccaaagtgacgaggaccacctgaag
gacctgctcctggccaagcgggacgcggtggcggtggacgtctccaagctcacctccttc
ctggtggacgagaagcaccgcgagagctgcgtgtga
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integrated database retrieval system
