Gadus morhua (Atlantic cod): 115539724
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Entry
115539724 CDS
T10832
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115539724 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmh03041
]
115539724 (sart1)
04121 Ubiquitin system [BR:
gmh04121
]
115539724 (sart1)
Spliceosome [BR:
gmh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
115539724 (sart1)
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115539724 (sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
DUF2027
Motif
Other DBs
NCBI-GeneID:
115539724
NCBI-ProteinID:
XP_030206366
Ensembl:
ENSGMOG00000000986
UniProt:
A0A8C5AYD8
LinkDB
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Position
3:complement(18607138..18609875)
Genome browser
AA seq
763 aa
AA seq
DB search
MGSSKKHKEKSRDKDTEDRRREHKKHRHKERERDAERDAGRDKEKRKRSRSRERPGREGR
GKGEKSGEPRVKKEKLEESSVIEPQSASGDASLSIQDTNKLRAKLGLKPLEMNENKKELG
TKEEPLVAETINPIHIKKQKEMREKLAALKEKRIRNLKLGKVKTLAEDDWLDDTTAWVEK
NRKAEKEKELAAKRAQLLEEMDQEFGVSSLVEEEFGQKKRDAYSSRDLKGLKVQHKIDSF
GEGQTVILTLEDKGVLEEKEDVLVNVNMIDKERADKNVELLKKKPDYKPYEEDESIDDMA
TLKAHTVLAKYDEEIDGEKKKSFRLSTGGVAEGVRERELQAIRETLRNQAQSLEMPSLSI
ASEYYTPQEMVGFKKTKRRVKKIRKKVLDEPLDDTRNTDFGSRVRGRGRKQAEELPEMPK
DSEPVSTLVTVVPQMSDDIRMAEMEMSDEEDFTPPDSAVIEEDEAEQELQKQLEKQRKLR
QKQLLKDSGEKVAQQMKLLERAAEDDPEMGSNITFNATSEFCRTLGDIPTYGLSGNREDQ
EDIMDFEHEADREDGGEMDSDMDENIGWSTVNLDEEQKQPDFTTASSTILDEEPIVSSGL
AAALLLCKNKGLLDTQMQKISRVKSGKPGPLPNDNYCIEDKMTIDDKYSRREEYRGFAQD
FKEKDLYRPEVKIEYVDESGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLEEEALLK
KMSSSDTPLGTVALLQEKQRSQKTPYIVLSGSGKSMNANTITK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggggtcttccaaaaaacacaaggagaagagtcgggataaggacaccgaggaccgacgt
cgcgaacacaagaaacatcgccacaaggagagagaaagagatgcggaacgcgatgcaggt
cgagacaaggagaagaggaagcgctccagatccagggaaagacctggtcgggaaggccga
ggcaagggggaaaaaagcggagagccccgtgtcaagaaggaaaagttggaggagagttca
gtaattgagccacagtctgcaagcggtgacgcgtccctcagcattcaggatacaaacaag
ctcagagccaaacttggcctaaaacctctggagatgaatgaaaacaaaaaggagttgggc
acaaaagaagaaccgctcgtcgcagagactatcaatccaatccatataaaaaaacagaaa
gaaatgagagagaaacttgcagcattgaaagaaaaacgcattcgcaatctaaagctgggc
aaggttaagaccttggcagaggatgattggttagatgacaccactgcctgggttgagaaa
aaccgcaaagcagaaaaagaaaaagaactagctgcgaagcgagcccagctcctggaggaa
atggaccaggagtttggtgtgagcagtctggtagaggaagaatttggacaaaagaaaaga
gatgcatattcatcccgggatctcaaaggactgaaagtacagcacaagattgactcgttt
ggtgagggccagaccgtcatcctcacactagaagacaaaggtgttctggaagaaaaggaa
gatgtgctggtcaatgtgaatatgatagacaaagaaagagctgacaaaaatgtggagtta
ttgaagaaaaagccagattacaagccgtacgaagaagatgagagcatagacgacatggcc
acactgaaggcccacactgttctggccaaatacgatgaagagatcgatggggagaagaaa
aagagtttccggctgagcacaggtggcgtggctgaaggggtacgggagcgagagctccag
gctattagagagaccctacgtaaccaggcccagtccctggaaatgccctctctctccatc
gcctcagagtactacacaccccaggaaatggtgggctttaagaaaaccaagcggcgtgtg
aaaaagatcaggaagaaggttctggatgagccgctggacgacactcgcaacaccgacttt
ggctcaagagtacgtggccgcggccgcaagcaggcagaggagctcccggagatgcccaaa
gacagcgaacctgtttctacgctggttaccgtggttccccaaatgtctgatgacatccgc
atggcggagatggagatgagcgatgaggaggacttcacgcctcctgactctgctgtgatc
gaggaggacgaggcagagcaggaactgcagaaacaactggagaagcaaagaaagctgaga
caaaagcagcttctcaaggactctggtgagaaagtggcacagcagatgaaactgctcgaa
agggcggctgaggatgatccagaaatgggaagcaacatcacattcaacgccacctcagag
ttttgcagaactctgggcgacattcccacgtatggcctttcaggcaaccgagaggaccaa
gaagatattatggactttgagcatgaggcagatagagaggacggaggagagatggattcc
gacatggatgaaaacattggttggagcacagtcaacctggacgaggagcaaaagcagcca
gatttcaccacagcctcgagcacaattttggatgaagagccaatcgtcagttctggcctc
gcagctgcgttactgctttgtaaaaacaaaggcttgttggacactcaaatgcagaaaata
tctcgtgtcaaatctggaaagccaggacccctgcccaacgacaactactgcatcgaagac
aagatgacaattgatgacaagtacagccgaagagaagagtacagaggcttcgcacaagat
ttcaaagagaaggatctctacagacctgaagtcaagattgagtatgtggatgagtctggg
cgcaagctcacgccaaaagaagcgttcaggcagctttcccatcgtttccatggaaagggg
tctggcaagatgaagactgagagaaggatgaagaaacttgaggaggaggccttgcttaag
aagatgagcagcagtgacactccactcgggactgtggctctgcttcaagaaaaacagaga
tcccagaaaactccatatattgtccttagtgggagtggtaaaagtatgaatgcaaacacc
attaccaagtag
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