Gadus morhua (Atlantic cod): 115539927
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Entry
115539927 CDS
T10832
Symbol
pex6
Name
(RefSeq) peroxisome biogenesis factor 6 isoform X1
KO
K13339
peroxin-6
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115539927 (pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115539927 (pex6)
Membrane trafficking [BR:
gmh04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
115539927 (pex6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
AAA_22
DUF815
Mg_chelatase
RuvB_N
AAA_14
NPHP3_N
nSTAND3
AAA_33
RNA_helicase
TIP49
AAA_19
AAA_7
AAA_25
Vps4_C
AAA_28
IstB_IS21
Parvo_NS1
AAA_24
AAA_17
Motif
Other DBs
NCBI-GeneID:
115539927
NCBI-ProteinID:
XP_030206678
Ensembl:
ENSGMOG00000018036
LinkDB
All DBs
Position
3:21823098..21835945
Genome browser
AA seq
1043 aa
AA seq
DB search
MASYGVLSCLDTFPTHMNPFDVLINKSQFQYAFPEYTDVHSGSVTVLFTVGQLKNRSKSR
LLLCAHPTVDDSPGPEDRNKPIILLVSRLFLRHHDLQHKSAGAVRLFPTSFLSKVVIGAK
SKHSFKWASSANFSTGLQVLASDGQTLLAREGDKLLLPYHPLFGDNWAQVQQLLLDLVVL
SCSPVRQGRITASSCIVVSDLSEPPGCLSPAKPRTKLFVSDFAHFSNSLYRSSSLLANKK
ALTSGFSGFLQALEGRVDVRVANLLPLLKDTHFRGQDLDSIVLVSKNLLMKLGLFNHEWV
VLSELKPQNSIDVSLPRGGRLASLLAMDLTPLSLELHLNDTSGLISTTHWFNLSGGETVP
TANRTLRIKRWNDSSVIRGSPSFCLSASPHFASKLHVEPVRSPQYDAHHCYDRMLAHHFN
TPRLVSAGDVLAISDENYTGEVESISHQRGVVLYFKVTKVFGPGDGEEEQTGLYLADKHH
TSLYTGGATGSLVPFCSVGSSLWSSVSPAGLTGSVDTITSIISPHFNNRSGVALGRCNIL
LQGARGCGKMTSARAACRRLHLQLFEVQCVSVCGDTTAACEVKMKSVFKKAESLQPCALL
LRNLQFLGPPRGGGDEDSRVQAALYQLLTSCSTRVVVIATVSRHREVSADVMAAFVHQVS
IESPNEEQRGAMLASLTLGLPLGRDVSLEYLAKHTSGLVLGDLSSLLAEAGRAATTRLLH
SCAGQWEVDLCSSGVGLELQDVTSALERLQGCRARAVGAPKIPSVRWQEVGGLQDVKQEI
LNTVQLPLQRPELLSLGLHRVGLLLYGPPGTGKTLLAKAVATECSMTFLSVKGPELINMF
VGQSEENIREVFSRARTAAPCVVFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDALH
SSRGVFVIGATNRPDLLDQALLRPGRFDKLVYVGINSDRESKLQVLKAITAKFHLDPDVS
LEVVVDECPSQLSGADLYALCSEAMTAAVRRKILLITDGLDTEDSPLVLSSEDFTMALKD
LQPSVSEQELLKYQNIQQQLTAK
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtatggagtgttgtcgtgtttggacacatttccaacacacatgaaccctttt
gacgttcttatcaataagtcacagtttcaatatgccttcccggaatacacagatgtgcat
tccggttctgtgactgtcctgttcaccgtgggacagctgaagaatcgcagtaaatccaga
cttttactttgtgcgcatccaacagtggatgacagccctggaccagaagaccgaaacaaa
ccgatcatcctgctggtgtcccggctctttctcagacatcacgacctacagcataaatcg
gcgggggcggttcggttgttcccaacctctttcttgagtaaagtggtgatcggagcaaag
tctaaacacagttttaaatgggccagctcggctaatttctccactgggctgcaggttctt
gcgtcggatggacagacactattggcccgggaaggggacaaactgttgctgccataccat
cctcttttcggagacaactgggctcaggtccaacagctcctcctggacctggtggtgttg
tcgtgtagcccggtgagacagggcaggatcacggccagctcatgcatcgtggtgtcggac
ctctcggagcctccaggttgcctctccccggccaaacctcggaccaaactgtttgtctca
gactttgctcatttctccaacagcctgtacaggagcagctcgttgctggccaacaagaag
gctctgacctctgggttctccgggtttctgcaggccttggagggcagagttgacgtccga
gtagccaatttattgcctctgctaaaagacacacattttcggggacaggatttggatagt
attgttcttgtgagcaagaatttgcttatgaaacttgggctgtttaatcacgaatgggtg
gtgctgtctgagctgaaaccacaaaacagtattgatgtgtctctcccccgtggaggtcgc
ctagcctccctgctggctatggatctcacgcctttaagtctggagctccacttgaatgac
actagtggtttaatttccacgactcactggttcaatctgtcagggggggagacggtcccc
acggccaacaggaccctgaggataaagagatggaatgactccagtgtgatccgggggtct
ccgagcttctgtctctcagcctcccctcacttcgccagcaagctgcacgttgaaccggtc
cgctccccacaatacgatgctcaccactgctacgatcgcatgctagctcaccacttcaac
acacctaggcttgtgtcagcgggagatgtcctggcgatctcagatgaaaactatacaggg
gaggtggagagcatttcacatcagaggggggtggtgctgtacttcaaggtgactaaggtg
tttggtcctggcgatggagaggaggagcaaacaggactttacctcgctgacaagcaccat
acttcactctacacgggcggcgccaccggcagcctggtaccgttctgcagcgttgggagc
tcgttgtggtccagtgtttctcccgcaggactcaccggcagcgtggacaccatcactagc
atcatttcaccacacttcaacaacagaagcggtgtggctctggggcgatgtaacatcctt
ctccaaggagcaagaggatgtggaaagatgacatctgctagagccgcctgcagacgactc
caccttcagctgtttgaggtccagtgtgtgagtgtgtgtggggacacgacggctgcgtgt
gaggtgaagatgaagagcgtgttcaagaaggccgagtctctccagccctgcgccctcctg
ctgaggaacctgcagttcctcggcccgccaagagggggtggtgatgaggacagcagggtg
caggctgccctctaccagctgctaaccagctgctctaccagagttgtcgtcatagcaaca
gtaagccgacatcgggaggtttctgcagacgtcatggcagcatttgtccaccaggtgtcg
atagagagccctaatgaggaacagagaggagccatgttggctagcctcaccctggggctt
cctctgggaagggacgttagccttgagtacctggcaaagcacacctctggtttggttctt
ggagatttgagctctctgctggctgaagctgggagggcagccaccacaagacttctgcat
agctgtgctggccagtgggaggtggacctctgctccagcggggtggggctggagctccag
gacgtgacctcggccctggagaggctgcagggctgcagggccagagctgtcggcgccccc
aagatccccagtgtgcggtggcaggaggtgggcggcctgcaggacgtgaagcaggagatc
ctgaacacggtgcagctgcccctgcagcggccagagctgctctccctaggcctgcaccgg
gtgggcctcctgctctacggaccccccggcaccggcaagaccctgctggccaaggccgta
gccaccgagtgctccatgaccttcctcagtgttaaaggccctgaactcatcaacatgttt
gttgggcagagtgaagagaacatcagagaagtgttctccagagcccggacggctgctccc
tgcgtggtgttctttgatgaactggactctctggcccccagcagggggcgcagtggagac
tctgggggagtcatggacagggtggtctcccagttgctggccgagctggatgctcttcat
tcgagcaggggggtctttgtgatcggggccacaaatcgtccggacctgttggaccaggct
ctgcttcgtcctggcaggtttgacaagctggtctatgttggaatcaactcagacagagag
tctaaactccaggtcctcaaggcgatcactgcaaagttccacttggaccctgatgttagt
ttggaggtggtggtggatgaatgtccaagccagctgagcggggcagacctctatgcgctc
tgctctgaagccatgactgcagccgtcagaaggaagatcttgctcatcaccgacgggctg
gacacggaagactccccacttgtgctgtcctcagaggacttcaccatggctctgaaggac
ctccagccatctgtttctgagcaagagcttctcaagtaccaaaacattcagcagcaactc
actgccaaatga
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integrated database retrieval system
