Gadus morhua (Atlantic cod): 115539990
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Entry
115539990 CDS
T10832
Name
(RefSeq) integrin alpha-L-like isoform X1
KO
K05718
integrin alpha L
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04514
Cell adhesion molecule (CAM) interaction
gmh04517
IgSF CAM signaling
gmh04518
Integrin signaling
gmh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115539990
04517 IgSF CAM signaling
115539990
04518 Integrin signaling
115539990
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115539990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmh04147
]
115539990
04515 Cell adhesion molecules [BR:
gmh04515
]
115539990
04090 CD molecules [BR:
gmh04090
]
115539990
Exosome [BR:
gmh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115539990
Cell adhesion molecules [BR:
gmh04515
]
Integrins
Integrin alpha subunits
115539990
CD molecules [BR:
gmh04090
]
Proteins
115539990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
FG-GAP
Integrin_A_Ig_1
FG-GAP_3
vWA_Rv0959
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
115539990
NCBI-ProteinID:
XP_030206801
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Position
3:complement(26230972..26264853)
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AA seq
999 aa
AA seq
DB search
MRTAVGNMYDRTGSHLLSFFGLIALLQPFCLAFNIDTADPSIYYGDGNGFFGHKVLQVTA
GEDKGILVTASLQQNGSGTVCRYMTHANSCFTPQEAMPGRLFGWSIAEEPTRSRFRLNPG
PVITHDLQPPAGILFSDQDSTKKTVDLVFLFDGSASMTRDEFNKNKDFIVDIMNSIKNSS
IKFAAVQFSSQPRKVFDFNDYHSGEATELLRNEPFMESLTNTYRALDYPLDELFENQAAG
ASPDATKVLVIITDGDPSDRDRNGIVKKYNDKEIIRLVIGVKWVRLDTLYALASEPKTVN
TFHIDNYNGLAGILKNFEEKILNIEDSRTALSEKLQYEKSQSGFSSVYHKGALVLGSVGS
KDWRGSLYERNGAEPGIHIEDPDMKHSSYMDSTKKTVDLVFLFDGSASMTRDVFNQSKEF
ILDIMNSIKNSSIKFAAVQFSLKPRKVFDFNDYHSGKATKLLRNEGFMQSITNTYKALDY
TLDELFENQTAGASPDATKVLVIITDGDPSDRDRNGIVKKYDEKEIIRLVIGVQQVKLDN
LYALASEPKTNNTFHINNYNGLAGILKNFEEKIFNIEDSRTALSEKLQYEMSQSGFSSVY
HKGALVLGSVGSKDWRGSLYERNGAEPGIHIEDPDMKHSSYMGYSVAAGEKDSVSLYFTG
APRYKHTGEVVVFRKTDNTWNVLQRVTGEQIGSYFGAELCLVDVQSDGHVDFLLVGAPMF
HCPQEKREGQIYIYKLTKKLELESVLNVTVPSRGRFGTTVSSLADLNGDGLRDVAVGAPM
EDDLRGAVYIYLGHQHTGIRPAFSQRITADPANARIRFFGQSVDGSADLGEDGLADLVVG
SRGAVVVLRSKPVVNVKARLHFEPAEISTASIQCPKTQTGTLPMVVLTVCFDLAEVTRSK
TGTTTTGLNISYSLDVDPLNTAVRGFFSETGKRDLHQTVELATKHCFNHSVSMPFCVYDT
LSPVVIRLNYTQHESEKAANILNADSATQTATEVPFEKN
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgagaactgctgtgggaaacatgtacgaccgcactggctcccatctgctgtcctttttc
gggctgattgcgttgttgcagcctttctgcctggcctttaacattgacacggctgacccc
agtatctactatggagatggaaatggtttctttggacacaaggtgctgcaggtcaccgct
ggcgaagacaaagggattttggtcactgcttccctgcagcaaaatggttcaggaacagtc
tgcagatacatgacacacgcaaacagctgcttcacccctcaagaggccatgccaggcagg
ctgttcggatggtcaatcgctgaggaaccaactcggtcgagattcaggctgaacccgggg
cccgtcattacgcacgatctgcagcctccagccggtatactcttctcggaccaagatagt
acaaagaaaacagttgacctcgtctttttatttgacggctctgcaagtatgaccagggat
gaattcaacaagaacaaagacttcattgtggacatcatgaacagcatcaagaactcctcc
atcaaatttgctgcagtccagttttcgtcacagcctaggaaagtgttcgacttcaacgat
taccacagcggggaggccacggagctactgaggaacgagccgttcatggagtctctcacc
aacacgtaccgggcgctggactaccctctggacgaactctttgagaaccaggctgcgggg
gcctctcccgacgccaccaaggtcctggtgatcatcacagacggggaccccagcgacaga
gacaggaatgggattgtgaagaaatataatgacaaagaaatcatacgccttgtgattggg
gtcaaatgggtgaggctggacaccctttacgccctcgcctcagagcccaagaccgtgaac
acttttcacatcgataactacaacggactcgccggaatcctgaagaactttgaagaaaag
atcttaaacatagaagattctcgaacggcactttctgaaaaactgcagtatgaaaagtct
cagagtgggtttagtagtgtctaccacaagggtgccttggtgctgggttcggtggggtct
aaagactggcgtggctcgctgtatgaacggaacggggcagaaccaggaatacacattgag
gaccctgacatgaagcacagctcctacatggatagtacaaagaaaacagtggacctcgtc
tttctatttgacggctctgcaagtatgaccagggatgtattcaaccagagcaaagaattc
attctggatatcatgaacagcatcaagaactcctccatcaaatttgctgcagtccagttt
tcgttaaagcctaggaaagtgttcgacttcaacgattaccacagcgggaaggccacgaag
ctactgaggaacgaggggttcatgcagtctatcaccaatacgtacaaggcgctggactac
actctggacgaactctttgagaaccagactgcgggggcctctcctgacgccaccaaggtc
ctggtgatcatcacagacggggaccccagcgacagagacaggaatgggattgtgaagaaa
tatgatgagaaagaaatcatacgccttgtgattggggtccaacaggtgaagctggacaac
ctttacgccctcgcctcagagcccaagaccaacaacacttttcacatcaataactacaac
ggactcgccggaatcctgaagaactttgaagaaaagatctttaacatagaagattctcga
acagcactttctgaaaaactgcagtatgaaatgtctcagagtgggtttagtagtgtctac
cacaagggtgccttggtgctgggttcggtggggtctaaagactggcgtggctcgctgtat
gaacggaacggggcagaaccagggatacacattgaggaccctgacatgaagcacagctcc
tacatgggctactctgtggctgctggagaaaaggattcggtgtccctgtacttcaccggg
gcaccgcggtacaaacacacaggagaggtggtggtcttcagaaagacggacaacacctgg
aacgtgctgcaaagagtgaccggagaacagattggctcatactttggggcggagctgtgc
ctggtagacgtccaatcagacggccacgttgacttcctcctggtgggtgcgcccatgttc
cactgccctcaggagaagagggaggggcagatatacatctacaaactgaccaagaagctg
gagctggagagcgtgctgaacgtgacggtgccgtcgcggggccgcttcggcaccacggtc
tcatccctggccgacctcaacggggacgggctcagggacgtggccgtgggggcccccatg
gaggacgacctcaggggggccgtgtacatctacctcggtcaccaacacaccgggatccgc
cccgccttcagccagaggatcacagccgatccagcgaacgcccggatccgtttcttcggc
cagtcggtggacggcagcgccgacctgggggaggacgggctggctgacctggtggtcggc
tcgcgtggcgctgtcgtcgtcttgaggtccaagccagtggtgaacgtcaaggcgcgtctg
cactttgaacctgcagagataagcactgccagcatccagtgtccgaaaacccagactggg
actctgcccatggtcgtcctcaccgtgtgcttcgacttggctgaagtgacacgcagtaag
actggaactacgaccacggggctgaacatctcctacagcctggatgtggatcctctgaac
actgcagtccgtgggttcttcagtgaaacaggcaaacgagatcttcatcagaccgtggag
ctggcgaccaaacactgcttcaatcactccgtcagcatgccgttctgtgtgtacgatacg
ttatcacccgtcgtcatcagactgaactatactcaacatgaaagcgagaaagccgctaac
atcctgaatgcagacagcgccacacagactgctactgaggtccccttcgagaagaactga
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