Gadus morhua (Atlantic cod): 115540013
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Entry
115540013 CDS
T10832
Symbol
trim33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115540013 (trim33)
Protein kinases [BR:
gmh01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
115540013 (trim33)
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115540013 (trim33)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115540013
NCBI-ProteinID:
XP_030206830
Ensembl:
ENSGMOG00000016005
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Position
1:23639965..23668143
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AA seq
1316 aa
AA seq
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MADNKGEDDMDTSVNSDTAPPAQDSGNSQTNEDNVVIVIEPNLKDEVPESRESAPTAPLP
STSEEGEASNSSGGGAGAEANGEASSTHSPAENTSANQEPTATESPATGDAPVSGLTTEM
SPPPTVPPVTPAAIPINLLDTCAVCKQNLQNRECEPKLLPCLHSFCLKCIPQPDRQLSLQ
VPGPHGQTETHIVNVMRCTVCCQDYKQSDIIDNYFVKDTSEATNTSSEKSAQTCTSCEDN
AGTIGFCVECAEWLCKTCVEAHQRVKITKDHKIRTKDDDGAGEEPTTPAPASAGQRPVFC
PVHKQEPLKLFCETCDTLTCRDCQLLEHKEHRYQFLEEAFLNQKGIIETHMTKLQEKRGY
VGFSVAQVQTRLKELSETHRKVEQEIKIAVFTLINEINKKGKSLLQQLEGVTKERNRRLV
TQHKDTAQLAQQIHHVLKFCHWAITTGSSTALLYSKRLILFQLRQVLKARLEPVPQANGS
VRFFCDPTFWAKNVVNLGNLVIEKPPQSAHPANVLVAGPPIPSAPGHPSKHQGQINLAQL
RLQHMQQQQAAYAQQKQQHQQQQQQQQQQQQQQQQHQQQQQQQQQHQQQQQQHQQQQQQH
QQQHQQQQQHQQQIQQQMRMASQLSQQHARPSMGQAGPSMVQQQPPRLISMQQIARGPVP
MNGGPGPHMYPSSHHMRLPGPSPQARMPSAQPRHNGQPQYPGMMQPQLQRQMSIESEMSH
QRFRFLLQSGHSNPGHAGPFPVASLHNANPTSPTSASMASMASAHGHRGTTSPIVGPIEL
IPSVTNPENLPCLPEIPPIQLEDAGSSSLGQLLTRYITASTHALPHLPLNLGEINLSPGP
STHSPGSSGLSNAHTPARPSSNSSTGSRGSCSSAGRTVVPGGPGVDQVRVKQEPGTKEDY
GCTASNSSSSNSSVKTERGNDSGRSACMMSSPESPLAPLGLPPPSSQDVYKPLGDRIKTE
PQSDAPCSGYNGSGDASAFSFPSTTSAASAANTTTTTTSSSSTSTGRTTTPAPPPAAAAL
APTNEAPSDPPLTNGTAGTSPSESSAAEGGEPTGADAAGAGSKEDDPNEDWCAVCINGGD
LLCCDRCPKVFHMKCHVPSIKIFPKGDFLCTFCRSLDTPEIQYCDDSKRNSDQSLSPEDQ
RRCERLLLYVFCHELSVGFREPVATSVPNYYKIIKQPMDLQKVKKKLQVRSAQQYRSTQD
FVSDVRLVFSNCSKYNEMSRIIQVYDEEKQINTQVGSEMATSGNAVSVRFEEKLKEVYPG
QSFPEAPEPEFQEGGGETPKPQTPQKEDEATDDSEDDFIQPRRKRLKVDEKALHIK
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaggcgaggatgatatggacacctctgttaattcagacacagcgcct
cctgcacaagacagtgggaattcacaaacgaacgaagacaacgtggttatagtaattgaa
ccgaatttgaaggatgaagttccagagtcgcgggagagtgcccctacggcccctctacca
tccaccagcgaagaaggggaagctagcaacagcagcggcggcggagcgggagccgaagcc
aacggcgaggcgagcagcacccacagccccgccgagaatactagtgcgaaccaagagccc
actgccacggagtccccggccaccggggatgctcccgtgagcggactgaccactgagatg
tcgccccctcccacggtcccgccagttacgccagctgccatccctattaatcttttggat
acgtgcgcggtgtgtaaacagaatctccaaaaccgagaatgtgaacccaaacttcttccc
tgtctacactcgttttgtttgaaatgtatacctcagccagacagacagctaagcttacag
gtgcccggaccacacggacagacagagactcatatagtgaacgtcatgcggtgcacggtc
tgttgccaggactacaagcaaagtgacatcatcgacaactacttcgtcaaagacacgtcc
gaggccacgaacacgtcgagcgagaagtccgcgcagacttgcaccagctgtgaggacaac
gcgggcaccatcggcttctgcgtggagtgcgccgagtggctgtgcaagacgtgcgtggag
gcccaccagcgggtgaagatcaccaaggaccacaagatccgcaccaaggatgacgacggc
gccggggaggagcccaccacgccagccccggcctcagcaggacagaggcccgtgttctgt
ccggtccacaagcaggaaccgctgaagctcttctgcgagacctgtgacacgcttacctgc
cgggactgtcagctcctggagcacaaagaacacaggtaccagttcctagaggaggccttc
ctcaaccagaagggcatcatcgagacccacatgaccaagctgcaggagaagaggggctac
gtgggcttctcggtcgcccaggtgcagaccaggttaaaagagctgagcgagactcacagg
aaggtggagcaggagatcaagatcgccgtcttcacgctcatcaacgagatcaacaagaag
ggcaagtccctgctccagcagctcgagggtgtgaccaaggagaggaaccggcggctggtc
acgcagcacaaggacacagcccagctggcccagcagatccaccacgtgctcaagttctgc
cactgggccattaccaccggcagcagcactgccctactctacagcaagaggctgattctg
tttcagctacggcaggtcctcaaagccaggttggagcccgtaccgcaggctaacggatca
gtgcgcttcttctgcgaccccaccttctgggccaagaatgtggtgaacctaggtaacctt
gtcatcgagaagcccccccagtcggcgcaccccgccaacgtgctggtggccggcccccca
atcccgtccgcccctggccacccgagcaagcaccagggccagatcaacctggcacagcta
cggctgcagcacatgcagcagcagcaggcagcgtacgcacaacagaagcagcagcatcaa
cagcagcagcagcaacagcagcagcagcagcagcagcagcagcaacatcaacaacagcag
cagcagcagcagcagcatcagcaacagcagcaacagcatcaacagcagcagcagcagcat
caacagcagcatcaacaacaacagcagcatcagcagcagatccaacagcagatgcgcatg
gcgtcgcaactgagccagcaacacgcaaggccttcgatggggcaggcgggtccgtcgatg
gtacagcagcagccccccaggctgatcagcatgcagcagatagccaggggtcctgtgccc
atgaacggggggccgggcccccacatgtacccttcctcccaccacatgcgtctcccgggg
ccctcgccccaggcacgcatgcccagcgcccagccgcggcacaacgggcagccccaatac
cccggtatgatgcagccccagctacagagacagatgtcaatagagtctgagatgagccac
caaaggtttcgtttcttactacagtcagggcattcgaacccggggcacgccggccccttc
cccgtggcctccctgcacaacgccaaccccaccagccccaccagcgccagcatggccagc
atggccagcgcccacggccaccgggggaccaccagccccatcgtggggcccatcgagctc
atcccctccgtcaccaaccccgagaacctgccctgcctgcctgagatcccccccatccag
ctggaggatgctggttccagcagcctaggtcagctgctgacgcgctacatcacggccagc
actcacgccctgccccacctgccgctgaacctcggggagatcaacctctccccggggccc
tccacccactcccccggctcctcaggtttgtccaacgcccacaccccagctcggccctca
agcaactccagtacaggcagcaggggcagctgtagttctgcagggcggacggtggtcccg
ggaggccctggagtggaccaggtcagggtcaagcaggagcccggcaccaaggaggactac
ggctgcaccgcctccaactcctcctcctccaactcctccgtcaagacggagcgggggaac
gactcgggccggagcgcgtgcatgatgagcagcccagagagcccgctggcccccctgggg
ctccccccgcccagcagccaggacgtgtacaagcccctgggggaccgcatcaagacggag
ccccagtcggacgccccctgctccggctacaacggctccggcgacgccagcgccttcagc
ttcccttcgacgacctccgccgcatccgccgccaacaccaccaccaccaccacctcgtcc
tcctccacgtccaccggcaggaccaccacgccggcccccccccccgccgccgccgccttg
gcccccacgaatgaggccccctcggacccgccgctcaccaacggcacggcgggcaccagc
ccgtcggagagctccgcggcggaggggggggaaccgaccggggccgacgccgccggggcc
ggcagcaaggaggacgaccccaacgaggactggtgcgccgtgtgcatcaacggcggcgac
ctgctgtgctgcgaccgctgccccaaggtgttccacatgaagtgccacgtcccctccatc
aagatctttcccaagggagacttcctgtgtacgttctgccggagtctggacacccctgag
atccagtactgtgacgacagcaagaggaattctgaccagagcttgagtcctgaggatcaa
aggcgctgtgagcgtctcctgctgtacgtcttctgccatgagctcagcgtgggcttcagg
gagcccgtggccacctcggtgcccaactactacaagatcatcaagcagcccatggacctg
cagaaggtgaagaagaagctgcaggtgcgcagcgcccagcagtaccgcagcacccaggac
tttgtctcggacgtgcgcctggtcttcagcaactgctccaagtacaacgagatgtctcga
ataatccaggtatatgatgaggagaaacagattaatacgcaggtgggctccgagatggcg
acgtcgggcaacgcggtgagcgtgcgctttgaggagaagctcaaggaggtgtacccgggc
cagagcttccccgaggcgcccgagccggagttccaggaaggaggaggggaaacgccgaag
ccgcagacgccgcagaaggaggacgaggccacggacgactccgaggacgacttcatccag
ccccggcgcaagagactaaaagtggacgagaaggccctgcacatcaagtga
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