Gadus morhua (Atlantic cod): 115540020
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Entry
115540020 CDS
T10832
Symbol
tmc6
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmh02000
]
115540020 (tmc6)
03037 Cilium and associated proteins [BR:
gmh03037
]
115540020 (tmc6)
Transporters [BR:
gmh02000
]
Other transporters
Pores ion channels [TC:
1
]
115540020 (tmc6)
Cilium and associated proteins [BR:
gmh03037
]
Other cilia and associated proteins
Stereociliary proteins
115540020 (tmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Cytadhesin_P30
Motif
Other DBs
NCBI-GeneID:
115540020
NCBI-ProteinID:
XP_030206832
LinkDB
All DBs
Position
3:30358156..30381685
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AA seq
903 aa
AA seq
DB search
MARHVGFDQSPQDPEVGLESPADEAGVHDSFSRLIAEQTQDERDPGYERDPGCERDPGYE
RDPGYERDPGHERDPGYERDPGYERDPGYERDPGYERDPGYERDPGYEPGLELQELQREL
DEEGRDYVSGLSPDQGARRRAPPRDGEGGRMSPMMGERWSSATLKILDSMPSRTIGRNRG
AILSQYYNRTLQLRMRRQSRPSLRDLPHSSRPSLRGYRVESDFSETDSRADSVRRQALVS
NLQKLSVSDRVRMLRAMPLSMADKRQLRSLVLQKTPSLPSGQIPCYSQLKFYVIVAARQL
WYSWFSFLHSLQLWQLALKRVGGRFGTGVLSYFLFLKTLLFFNLFLFLVTGLFLVLPQAV
HPPPAVHPPQAHQAPQRPASFSGLELLTGGGYFSDSVLYYGYYSDTTLNRDCDNNGSAPS
PGGWRGLDCARQGLSYSMPLAYFFTIGTAFFITCIILVFSMSRSFGQSFRVEQSPSLLAM
KAFCSWDFKVVKTSSVALMSENIGTQLRELLADVTRNHANQTAGQRLWRLLVHGLAWTIC
SGSTVACALAVHYLAQHMHAVRVLQARGGAGGVAADPQPSEAHLLALPVAVSLINLLLPG
LFNAAGWMEEYDSPSVRNSVAIVRNLMLKVSLLSVLCFHWLGREATSGLQCWESFVGQEL
YRFLLMDFIFTLLDTLLGEFLWRLFSEKVLKKSRRPVFDIARNVLELIYGQTLAWLGVLF
TPLLPGVQIIKLLLLFYIKMSSVMLNCQAPRKPYRASKMTTVFITLLCFPSFLGASVCVT
YTMWSIAPSRACGPFRGLSTMMQAGRLWVEQLRDANPHLTWLATAHSYLVENPLFLFVAA
GVFMIIIYFNSQVVGGQRKVIALLQEQIKNEGEDKKFLIRQLQTTHAKKRDTPARRSQQD
SAC
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacatgtgggttttgaccagagcccacaagacccggaggttggattggagagc
ccggcggacgaggcgggcgtccacgactcgttcagccggctgatagcggagcagacccag
gacgagagggacccgggctacgagagggacccgggctgcgagagggacccgggctacgag
agggacccgggctacgagagggacccgggccatgagagggacccgggctacgagagggac
ccgggctacgagagggacccgggctacgagagggacccgggctacgagagggacccgggc
tacgagagggacccgggctacgagccggggctggagctgcaggagctgcagagggagctg
gacgaggagggccgagactacgtgagcggcctctcccctgaccagggggcgaggcgccgg
gcccccccccgggacggggaggggggccggatgagtcccatgatgggggagaggtggtcc
tccgccaccctgaagatcctcgactccatgcccagccgcaccatcggccgtaacaggggg
gccatcctctcccagtactataaccggaccctccagctccgcatgcgacggcagagccgg
ccgtcgctccgggacctgccccactcctcccggcccagcctccgggggtacagggtggag
tcggacttcagcgagacggacagccgggcggacagcgtcaggaggcaggccctggtgtct
aacctccagaagctgtctgtgagcgaccgcgtccggatgctgcgggccatgcccctcagc
atggccgacaagagacagctcaggagtctggttctgcagaagaccccctcccttcccagt
ggtcagatcccgtgttacagtcagctcaagttttatgtcatcgtcgcggccaggcagctt
tggtacagctggttctcgttcctgcactccctccagctgtggcagctggcgctgaagagg
gtgggcgggcgcttcggcaccggcgtgctctcctacttcctgttcctgaagacgctgctg
ttcttcaacctcttcctgttcctggtgaccggtctgttcctggtgctgccccaggccgtg
cacccgcctccggccgtgcacccgccccaggcgcaccaggcgccccagagacccgccagc
ttctctgggctggagctgctcaccggagggggctacttctcggactctgtgttgtactac
ggttactatagcgacaccaccctgaaccgggactgcgacaacaacggctccgccccctcg
ccgggcgggtggagggggctggactgcgccaggcagggcctctcctacagcatgcccctc
gcctacttcttcaccatcgggaccgccttcttcatcacctgcatcatcctggtgttcagc
atgtccaggtctttcggtcagagtttccgcgtggagcagtctcccagcctgctggccatg
aaggccttctgctcctgggacttcaaggtcgtcaagacttcctccgtggcgctcatgtcc
gagaacatcggcacgcagctgagggagctgttggcggatgtgacccgtaaccatgccaac
cagaccgcgggccagcggctgtggcggctgctggtccacggcctggcctggaccatctgc
agcgggagcacggttgcctgcgccctggccgtgcactacctggcccagcacatgcacgcg
gtcagagtgttgcaggcgaggggcggggcagggggcgtggccgcggacccccagccgtcg
gaggcccacctgctggccctgccggtggccgtgtccctcatcaacctgctgctgcccggc
ctcttcaacgccgccggctggatggaggagtacgactcgcccagcgtgcgcaactccgtg
gccatcgtcaggaacctgatgctgaaggtcagcctcctgagcgttctgtgtttccattgg
ctgggccgcgaggcgacctctggcctgcagtgctgggagagtttcgtgggtcaggagctc
taccgcttcctgctgatggacttcatcttcacgctgctggacacgctgctgggagagttc
ctctggaggctgttctcagagaaggtgctgaagaagagcagaaggccggtgtttgacatc
gccaggaacgtcctggagctcatctatggacaaaccctggcctggctgggggtcctcttc
acgccccttctgcccggggttcagatcatcaaactcctgctgctcttctacatcaagatg
agcagcgtgatgctgaattgccaggcgccccggaagccgtaccgggcgagtaagatgacg
accgtcttcatcacgctgctctgcttcccctccttcctcggggcgtccgtctgcgtcacc
tacaccatgtggagcatcgccccgtcccgggcctgcgggccgttccggggcctcagcacc
atgatgcaggcgggccggctgtgggtggagcagctcagggacgccaacccccacctcacc
tggctggccaccgcccactcctacctggtggagaaccccctcttcctgttcgtggccgcc
ggggtcttcatgatcatcatctacttcaacagccaggtggtcggcgggcagaggaaggtc
atcgccctgctgcaggagcagatcaaaaacgagggcgaggacaagaagttcctcatccgg
cagctccagaccacgcacgcgaagaagagggacacgccggcccgccgcagccaacaggat
tcggcctgttga
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