KEGG   Gadus morhua (Atlantic cod): 115540297
Entry
115540297         CDS       T10832                                 
Symbol
polr1e
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA49
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115540297 (polr1e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gmh03021]
    115540297 (polr1e)
Transcription machinery [BR:gmh03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     115540297 (polr1e)
SSDB
Motif
Pfam: RNA_pol_I_A49 EIF3CL_C
Other DBs
NCBI-GeneID: 115540297
NCBI-ProteinID: XP_030207314
Ensembl: ENSGMOG00000003336
UniProt: A0A8C4Z1E8
LinkDB
Position
3:8180272..8184867
AA seq 425 aa
MLIQSSTTMAANCTFVCCEEERDTDKATIVQFSNGNIKNAEQLDFTFYKNTDEEHPRKKS
RRVLVAESARLSYVANNFGPGSLKCNNLCKYYVGVLNKDTMEMEMHSAQLFKMQPFIAGE
PKVTEQVDNATLTYSEKLNSLVEAFGTTRQRRALKSHRLNRVGAESLQQVVAKAANSVIE
QKGFAALSEELHEASNQLDMALYIPPCYPDAERPEDVYLFDDLLSPADYEELAVAGSQMA
ALAEEGLQTLKDGKCLSIVKHMESLPSGKTAREKMLRCCAYLYLLLQLYRAGRVNGRFGQ
NEGCTFNLRRKIFKTFTVETFWKGRLSNQVSPSMRAKIAAYCLALQLHMGFMSVNLTLLQ
RDLLVKEMWIMEVAKSLGLTLIKPARVKAKGATLDPAEDHKFATLVLPLVKYKAKLDRSF
TKKRE
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgctaatacagtcgtcaacaacaatggctgctaactgcacgtttgtgtgttgtgaagaa
gaaagagatacagataaagctactattgttcagttttccaatggaaatataaagaacgca
gagcagctggacttcacgttctacaagaacacagacgaggaacatcctcgaaagaaatcg
agacgtgtgttggttgctgaatccgccagactatcgtatgttgcaaacaattttgggcct
gggtcgttaaaatgcaacaacctttgcaaatactatgttggggtgctgaacaaagacacc
atggagatggaaatgcacagtgctcagctctttaaaatgcaaccttttattgcaggggag
ccgaaggtgaccgaacaggttgacaacgctaccctgacctattctgaaaagttgaactcc
cttgttgaggcgtttggaaccacaagacagaggagagccctgaaatctcatcggctgaac
agggtgggcgccgagtccctgcagcaggtcgtggccaaggctgccaacagcgtgatcgaa
caaaagggatttgcagctctcagtgaagagctccatgaggccagtaaccaactagacatg
gctttatacatccccccatgctaccctgacgctgaaaggcctgaagatgtctacttgttt
gatgacctcttgtccccggcggattatgaagagttggctgtagctggttcccaaatggct
gctctggcagaagagggtctgcagacattgaaggatggcaaatgtttgagcatcgttaag
catatggaatctctaccgagtggaaagactgccagggagaagatgttgcgctgctgtgcc
tacctctacctgctcctgcagctgtatcgagcgggaagggttaatggcagatttggccag
aatgaagggtgcaccttcaatctccggagaaaaatctttaagacctttactgtggagacc
ttttggaaaggccgtctgagtaaccaagtgtccccgtccatgcgtgcgaagattgcagcc
tactgcctcgcactgcagctacacatgggtttcatgtcggtgaacctgacgctgctgcag
cgagacctgttagtcaaggagatgtggataatggaggttgccaaatcactgggactgact
ctcataaagcctgcccgcgtcaaagccaaaggagcgacgcttgacccagcagaggaccac
aaatttgccactctggttctccctctggtcaaatataaagccaagctggataggagtttt
acgaaaaaaagagagtag

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