KEGG   Gadus morhua (Atlantic cod): 115540480
Entry
115540480         CDS       T10832                                 
Symbol
plod1
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 isoform X1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh00310  Lysine degradation
gmh01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    115540480 (plod1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gmh04147]
    115540480 (plod1)
Enzymes [BR:gmh01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     115540480 (plod1)
Exosome [BR:gmh04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   115540480 (plod1)
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3
Other DBs
NCBI-GeneID: 115540480
NCBI-ProteinID: XP_030207678
Ensembl: ENSGMOG00000003290
LinkDB
Position
1:27323491..27341555
AA seq 732 aa
MKIVFLLAFSALFSFAQLPLTSSEEQKTPEDLLVLTVATAETDGFSRFLRSAKLFNYTVK
VLGRGEEWQGGDYMAPGGGQRIRLLKAALEEMKEEQEKTILFIDSYDVVFASGPKELLKK
FQQSGHRVVFSSETLIWPDRHLEDKYPHVREGNRFLGAGGFIGYLPNVKTMVADWTGEDH
DSDQLFFTNIYINPEKRKSINITLDSRCRLFQNLNGALDEVVLKFEDSRVRARNVLYDTL
PVIVHGNGPTKLQVNYLGNYIPKVWTFETGCTECHQNLRPLTGIQESEFPQVTIGVFIQQ
PTPFLAVFFERLLNLQYPKNRLKLFIYNQESHHKKQVDSFLEGHGGLYQDVKVVGPEGAD
TDSISSRNLGLDLCRQDKQCKYFFSVDSEVVLKNKDTLKILIEQNLPIVAPMITRPGRLW
SNFWGALSADGFYARSEDYVDIVQGRRVGVWNVPYISSVYLVKGDVLRSGIPDYDLFSSD
TQDADMAFCTSVRSKGVFLYVTNMHTFGRILSVENYQTKHLHNDLWQIFENPVDFEERYI
HPNYSLIMKNKLIETPCPDVYWFPMFSEVACDHFVQEMEHFGQWSGGGAVDKRIQGGYEN
VPTIDIHMNQVGYEKEWHKLLLDYVAPITEKLFPGYYTKAEFDLAFVVRYKPDEQPSLRP
HHDASTFTVNVALNQVGLDYQGGGCRFIRYNCSVEAPRKGWSLMHPGRLTHYHEGLPTTG
GVRYIAVSFIDP
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgaaaatagtattcctcttggcgtttagtgcattgttcagctttgcccaattgcctctg
acaagctccgaagagcagaaaactccagaagacctcctagtattgacagttgccaccgca
gagacagatggcttcagccgtttcctgaggtctgcaaagctcttcaactatactgtcaag
gtgctggggcgcggggaggaatggcaagggggggactacatggcccccggaggaggccag
aggatacgcctcctcaaggcggctctggaggagatgaaggaggagcaggagaagaccatc
ctattcatagacagctatgatgtggtgtttgcctctgggcccaaggagctgctgaaaaag
ttccagcagagcgggcacagggtggtcttctcttcagagaccctcatctggcctgacaga
cacctggaggacaagtacccgcacgtccgcgagggaaaccgcttcctgggggcgggaggc
ttcattggctacctccctaatgtcaagacgatggtcgctgattggacaggagaagaccac
gacagtgaccagttgtttttcactaacatctatatcaacccagaaaaaaggaaatccata
aatatcacactggacagcagatgcagattgttccaaaacctcaatggagcccttgatgag
gtggtgctgaagtttgaggacagccgggtacgggccaggaatgtgctgtatgacacactt
ccggtcatcgtccatggcaatggccccaccaagttgcaggtcaactaccttggcaactac
attcccaaggtgtggacctttgaaaccggctgcactgaatgtcaccagaacctcagacct
ctcactgggatccaggagagtgaatttcctcaggtgacgatcggggtcttcattcagcag
cccacccccttcctcgctgtcttttttgaacgcctactgaatcttcagtaccccaagaac
agactgaaactcttcatatacaaccaggagagccaccacaagaagcaggtggactccttc
ttggagggccatggcggtctgtaccaggacgtcaaggtggtgggcccagagggagccgac
acagacagcatctcctcgcgcaaccttggcctggatttgtgtcgacaagacaaacagtgt
aaatatttcttcagcgtggacagcgaagttgtcctgaagaacaaggacacgctcaaaata
ctcatcgagcaaaacctgcccatcgtggctcccatgatcactaggcccgggcgactgtgg
agcaacttctggggcgcgctcagcgctgacggcttctacgcccgctctgaggactacgta
gacatcgtccagggacgcagggtgggggtgtggaacgtgccctacatctccagcgtgtac
ctggtgaagggggacgtgcttcgctccggtatccctgactacgacctcttcagctccgac
acgcaggatgcggacatggccttctgcaccagtgttcgcagcaagggggtgttcctgtac
gttaccaacatgcacacgtttgggcgcatcctgtctgtggaaaactaccagacgaagcac
ctccacaatgacctctggcagatcttcgagaaccctgtggacttcgaagagcgctacatc
catccaaattactccctcatcatgaaaaacaagctgattgaaacgccctgccctgatgtg
tactggttccccatgttctcggaggtggcctgcgaccactttgtgcaggagatggaacac
tttgggcagtggtctgggggtggtgccgtggataagagaatccaggggggctatgagaac
gtgcccaccatcgacatccacatgaaccaggtgggctacgagaaggagtggcacaagctg
ctgctggactatgtggctcccatcacagagaagctgttccctgggtactacaccaaggct
gaatttgacttggcttttgtagttagatataagccagacgagcaaccttctttaaggccg
caccacgatgcctcgacattcactgtaaatgttgcactcaatcaagtgggccttgattac
cagggtggaggctgtcgattcatccgctacaactgttcagttgaggcaccccgaaaaggc
tggtctctcatgcaccctggccggctcacccactaccatgaggggctccccactaccggg
ggtgtccgatacatcgccgtctcctttattgacccctga

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