KEGG   Gadus morhua (Atlantic cod): 115540511
Entry
115540511         CDS       T10832                                 
Name
(RefSeq) protocadherin-18-like isoform X1
  KO
K16499  protocadherin delta 2
Organism
gmh  Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:gmh04515]
    115540511
Cell adhesion molecules [BR:gmh04515]
 Cadherins
  Protocadherins
   115540511
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2
Other DBs
NCBI-GeneID: 115540511
NCBI-ProteinID: XP_030207743
Ensembl: ENSGMOG00000003211
LinkDB
Position
3:28030396..28040875
AA seq 1270 aa
MEGLCSTMWKVIVLLAIASLASGKTLKYQIYEEQKAGTVIARLKDDVADVLAKLPNTVSL
RFRAMQRGSMSLLAVREADGEISIKTKIDREKLCEKNLNCSIQFDVLTLPTEHLQLFHVE
VEVLDINDNTPQFARSIIPIEISESAAVGARIPLDSATDPDVGENSLYSYALEPNNFFKI
DIQSRTDGAKYAELVVLKELDREVRAGYELQYTASDKGVPARTGSTLLRISVADSNDNSP
IFDKSSYIINLPENAPVGTLLINLNATDADEGTNGKIVYSFSSHVSGKILDTFKINPDSG
HMTLIRRVDYETASSYDIDVQAQDMGPNSMPAHCKILVKVGDVNDNKPDISINLMSSQGK
EDAAYLSEASPLDTFVALVRVEDMDSGLNGEIVCKLHGQGYFKLQKTYENNYLILTNVSL
DREKRSEFSLTVVAEDRGTPSLSTIKHFTVHVTDENDNPPRFEKGRYEIFKSENNAPGAY
LYSLVATDADLNANGQVSYSIVENNIHGSSISTYVTIDPSNGAIYALRTFDREDVSHISF
VVQAKDAGSPALSSNATVSLNILDENDNPPAIVVPQLWNFTADVPVSKFTEAGHLVTALR
VTDRDTGVNAELICSIAGGNDEGFFIMDPRTCEVHANASLEGFPRERAELAVLVRDQGSE
SLSAKAVLKITLYENMENHVQVMDPGESSFDASLIIIISLGAICALLLVIMVAFAARCSR
EKKETRNSYNCRVAESNHQHHPKKPSRQIHKGDITLVPTVNGTLPIRAHHRSPLTTPPLD
RAPMGSRQSHHSRQSLNSLVTISSNHIPESFALELTHTTPPVEQVSQLLSMLHQGQYQPR
PSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDMGRESPVDRLILGEGFSDLL
HLEMHHRLHPAMRLCTDECRVLGHSDQCWMPPLSSPASSDYRNNMYIPGEESQAQPQSHL
LHQQQQQQHQHHLLHHQQQVADDDQASLESERRKSFSTFGKESGSEEEVSPGVAVGVAMG
GAGSDACGAMAPGMGGSLLTEMNHVFQRLLPPNGNNAYSDCGEPLALAPPSSSAAAAAAT
AVGPAPGPPPVNSSSTSERGTACGSSGGNHGNSNAMPQENRKGLLPGGKVPVYPPGVAAW
AANAHYLTNPGNGNHAAAPCLPPPSSTCPSASSPSSNNNNAPNNGQPPHLKWLPAMEEIP
ENYEEDEFDGVFQQCNPGVAKRVAAADGPREGGGCGGGGGGNGGGNGGGMDASELVNEIN
KLLQDVRQGS
NT seq 3813 nt   +upstreamnt  +downstreamnt
atggaaggactttgtagtacgatgtggaaagttatagtgcttttggccatcgcgtccctc
gcgagcggcaagacgctgaaataccagatctatgaagaacaaaaagcaggcacagtgatc
gcccgtttgaaagacgacgttgccgatgtcttggccaaacttcccaacacggtgtctctg
cgcttcagggcgatgcagcgagggagcatgtctttgctggcggtccgcgaggcggacgga
gagatcagcatcaagaccaaaatcgaccgcgagaaactttgcgaaaagaaccttaactgt
tccatccaattcgacgtgctgaccctcccaaccgagcacctgcagctcttccacgtcgag
gtggaggtgttggatatcaacgacaacacgccccagttcgcccgctccattatccccatc
gagatatccgagagcgcggcggtgggagcgcgcattcccctggacagcgccaccgacccg
gacgttggggaaaactccctgtacagttacgcgttggaaccaaacaatttcttcaagatc
gacatccagtccaggaccgacggcgccaaatacgcggagttggtggtgctgaaggaactg
gatcgggaggtgcgggcgggttacgaactccagtacaccgcgtctgataagggcgttccc
gcaagaacaggttcgaccctcctcagaatcagtgttgcggactccaatgataacagtcct
atttttgacaagtcgtcatacatcattaacttacccgaaaacgcacctgttggcacacta
ctgatcaacctaaacgccaccgatgcggacgaggggaccaacggcaagatagtgtactcc
ttcagcagtcacgtgtctggtaaaatattagacacgtttaaaatcaacccagacagcggt
cacatgaccctgatcagacgcgtggactatgagaccgcgagctcgtatgacatcgacgtg
caagcgcaagacatggggccgaactccatgcctgcgcactgcaagatcctggtcaaggtg
ggagacgtgaacgacaacaagccagacatcagcatcaacctcatgtcctcccaggggaag
gaagacgcggcctacttatccgaggcctcccctttggatacctttgtggctctggtgcgc
gtggaggacatggactcgggactaaacggggagatagtgtgcaaactgcacggccagggc
tacttcaaactgcagaagacctacgagaacaactacctgatcctcaccaacgtgtccctg
gaccgcgagaagaggtcagagttcagcctgacggtggtggcggaggaccggggaaccccc
agcctctccaccatcaagcacttcacggtgcacgtcaccgacgagaacgacaacccgccg
cgcttcgagaagggccgctacgagatcttcaagtcggagaacaacgcgcccggggcgtac
ctctactcgctggtggccaccgacgccgacctcaatgccaacggccaggtgagctactcc
atcgtggagaacaacatccacggcagctccatctccacctacgtcaccatcgacccgtcc
aacggcgccatctacgccctgcgcaccttcgaccgcgaggacgtcagccacatctccttc
gtggtgcaggccaaggacgccggctccccggcgctctccagcaacgccaccgtgtccctc
aacatcctggacgagaacgacaacccgcccgccatcgtggtcccgcagctgtggaacttc
accgccgacgtgcccgtgtcaaagttcaccgaggcgggccacctggtcaccgccctgagg
gtcaccgaccgcgacacgggggtcaacgccgagctcatctgctccatcgccgggggcaac
gacgagggcttcttcatcatggacccgcgcacgtgcgaggtgcacgccaacgccagcctg
gagggcttcccccgcgagagggcggagctggccgtgttggtgcgggaccagggcagcgag
agcctgagcgccaaggccgtgctgaagatcacgctgtacgagaacatggagaaccacgtg
caggtgatggacccgggggagtcctccttcgacgcctccctcatcatcatcatctcgctg
ggcgccatctgcgcgctgctgctggtcatcatggtggcgttcgccgcccgctgcagccgg
gagaagaaggagacgaggaactcgtacaactgccgcgtggcggagtcaaaccaccagcac
caccccaagaagccctcgcggcagatccacaagggggacatcaccctggtgcccaccgtc
aacggcaccctgccgatccgggcgcaccatcgctcgcctctgaccacgccccccttggac
cgagcgccaatgggaagcaggcagagtcaccacagcaggcaatcgttgaacagcctggtg
acgatctcgtccaatcacatcccagagagctttgcgttggagctgacccacaccacgccc
ccagtggagcaagtctcacagcttctgtccatgctccatcagggccagtaccagcccaga
cccagtttccgtggcaacaaatactcccgcagctacagatatgcactacaggacatggac
aagttcagcctgaaggacagtggtcgtggggacagcgaggccggggacagcgactatgac
atgggccgcgagtcccccgtggacaggctgatactgggagagggcttctctgacctgctg
caccttgagatgcaccacaggctccacccagctatgagactgtgcaccgatgagtgtcgt
gtactgggccactcagaccagtgctggatgccccctctgtcgtccccggcgtcctccgac
taccgcaacaacatgtacatcccaggggaggagtctcaggcgcagccccagtcccacctc
ctccaccagcagcagcagcagcagcatcagcaccatctcctccaccaccagcagcaggtt
gccgacgacgaccaggcctccctggaatccgagcgccgcaagagcttctccaccttcggc
aaggagtcgggcagcgaggaggaggtctcgccgggcgtggccgtgggcgtggccatgggc
ggagcaggaagtgatgcgtgcggggcgatggcgccgggaatgggcggttccctgctgacg
gaaatgaaccacgtgttccagcgcctgctgccccccaacgggaacaacgcctacagcgac
tgcggcgagcccctcgccttggccccgccctcctcctcagccgcagccgccgccgccacc
gccgtcggccccgcccccgggccgccgcccgtcaactcctcgtccacctcggagcgaggc
accgcctgcgggagcagcggcggtaaccacggcaacagcaacgccatgccccaggagaac
cgaaagggcctgttgccgggcgggaaggttccggtctacccccccggggtggcggcctgg
gcggccaacgcccactacctgacgaaccccggcaacggtaaccacgcggccgccccctgt
ttgcccccgccgtcctccacctgcccctccgcctcctcgccctcctccaacaacaacaac
gcccccaacaacggacagcccccgcacctaaaatggctgccggcgatggaggagatcccc
gagaactacgaggaggacgagttcgacggggtcttccagcagtgcaaccccggggtcgct
aagcgcgtcgccgcggccgacgggccccgtgagggcggcggatgcggcggcggcggcggc
ggcaacggtggcggcaacggcggcggcatggacgccagcgagctggtcaacgagatcaac
aagctgctgcaggacgttcgccagggctcctga

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