Gadus morhua (Atlantic cod): 115540513
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Entry
115540513 CDS
T10832
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmh04515
]
115540513
Cell adhesion molecules [BR:
gmh04515
]
Cadherins
Protocadherins
115540513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
DUF4621
Motif
Other DBs
NCBI-GeneID:
115540513
NCBI-ProteinID:
XP_030207750
Ensembl:
ENSGMOG00000013454
LinkDB
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Position
3:complement(28199441..28218663)
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AA seq
1098 aa
AA seq
DB search
MICLLLLVLSCLLHGAVSQLHYSVPEEQDPGSVVGNIAEDLGLDITKLSARRFQTVPSSR
TPYLEVNLENGALLVKEKIDREEICKQTIPCLLHLEVFLESPLELFRVEIEVMDINDNPP
SFPETDISVEISESAIPGTRFPVENAFDPDVGTNALNTYAITNNNYFYLDVQTQSDGNKF
AELVLEKPLDREQQAVHRYVLTAVDGGVPQRTGTALLVVKVLDSNDNAPTFDQSVYTVSL
RENSPVGTLVIQLNATDVDEGQNGEIVYSLSSHNAPRIKDLFSIDARTGRIEVSGEVDYE
ESNTHQIYVQAKDLGANAVPAHCKVLVKLVDVNDNTPEIGFSTVTESVSEQDAPGTVIAL
FSVSDRDSAENGQVSCELLGDVPYKLKSSFKNYYTIVTDGTLDRESLDAYTITVVAKDTG
QPSLATSKSIKVHVSDENDNAPRFTQVVYDVYVTENNVPGAFIHAVSALDPDIGPNALIT
YSILECEIQGMSVETYVSINQDTGYLYALRSFDYEQLKEFSFMVQAKDSGVVELLSNATV
NVIIVDQNDNTPTVIAPVGKNGTAREHLPRSAEPGYLVTRVVAMDSDDGENARLSYSIQR
GNEMGMFRMDWRTGELRTARRVSPKRDPQGYYNLLIEVRDHGQPPLSSSASVSVVLVDSV
VEGRGGADRGSASKSKETTLDLTLILIIALGSVSFVFLLAMIVLAVRCQKDKKLNIYTCL
MSSGECCLCCSACCSRSARGRKQKKLSKSDIMLVQSTNVTTGVGPVGQVPVEESGVGGVG
GGFGSHHHQNQNSYCYQVCLTPESAKTDLMFLKPCSPSRSTDTDHTNPCGALVPSYGDQQ
PDIISNGSILSSETKHQRAELSYLVDRPRRVTSSAFQEADIVSSKDSGHGDSEQGDSDHD
ATNRGHPAGADLFSNCTEECKALGHSDRCWMPSFVGSDARQGPDYRSNLHVPGMDATLPD
TEVPSRPAAATAHHADHADQLLIAATNSTSSMAAATHPTNTAVVAPLSGALSNDRSFSTF
GKDATQRSQSHHSLNRHLQPSAPPQQGPTPPGPPFSASTLERKEYDRGTLLYKPTFLCEY
QYESSLGPHQFSVAQHQY
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgatttgtttgctgctgctcgtcctgtcctgcctcctgcacggagccgtttcccagctc
cactactcggttccagaggagcaggacccgggttcggtcgttgggaatatcgcagaggat
ttaggactggacattacgaaactttccgcccggcgcttccagacggtgccaagttcccgg
acgccgtacctggaggtaaacctggagaacggcgcgctgctggtgaaggagaagatcgac
cgggaggagatctgcaagcagaccattccgtgcctattgcacctggaggtgtttttggag
agcccactggagctctttcgggtggagatcgaggtgatggatatcaacgacaaccctccc
agttttcctgagacggacatcagtgtggagatatcggagagcgccattcccgggacccgt
tttccggtggagaacgcgtttgacccggacgtaggcaccaacgcgctgaacacctacgcg
atcacgaacaataactacttttacctggacgtccagacgcagagcgacgggaacaagttc
gcggagctggtgctggaaaagccgctcgaccgggagcagcaggcggtgcaccggtacgtg
ctgacggcggtggacggcggggtgccgcagcgcacgggcaccgcgctgctggtggttaaa
gttttggattccaacgataacgcgcccacgtttgaccagtctgtgtacacggtgagcttg
cgggagaactctcctgtgggcaccctggtcatccagctcaacgccacggacgtcgacgag
ggacagaacggggagatcgtgtactctttgagcagtcacaacgccccgcggataaaggac
ttgttcagcattgacgcgagaaccgggaggatcgaggtgtccggggaggtggactacgag
gagagcaatacgcatcagatatacgtccaggcgaaggacctgggggccaacgcggtgccc
gcgcactgcaaagtcctggtcaagctggttgacgtgaacgacaacacaccggagatcggc
ttcagcaccgtgacagagtcggtgagcgagcaggacgcgccgggcaccgtgatcgccctc
ttcagcgtctccgaccgggactcggcggagaacggccaggtgagctgcgagctcctggga
gacgtgccgtacaagttgaagtcttcgttcaagaactactacaccatcgtgacggacggc
acgctggaccgggagagcctcgacgcgtacaccatcaccgtggtggccaaggacacgggg
caaccctcgttggccaccagcaagtccatcaaagtgcacgtctcggacgagaacgacaac
gcgccgcgcttcacccaggtggtgtacgacgtgtacgtgacggagaacaacgtgccgggc
gccttcatccacgccgtgagcgccctggacccggacatagggcccaacgcgctcatcacc
tactccatattggagtgcgaaatccagggcatgtccgtggaaacgtacgtgtccatcaac
caggacacgggctatctttacgcactgcgctccttcgactacgagcagctgaaggagttc
agcttcatggtgcaggccaaggactctggcgtggtcgagctactgtccaacgccacggtc
aatgtgataatcgtggaccagaacgacaacacgcccaccgtgatcgcccccgtggggaag
aacggcactgcgcgggagcacctgccgcgctcggcggagcccgggtacctggtgacgcgc
gttgtggccatggactcggacgacggcgagaacgcgcggctctcgtacagcatccagcgg
ggcaatgagatggggatgttccgcatggactggaggaccggggagctgaggactgcccgg
cgggtgtccccaaaacgggacccgcagggctactacaatctgctgatcgaggtgagggac
cacggccagcccccgctgtcctcctcagccagcgtgagcgtcgtcttggtggacagcgtg
gtggaaggccgcggcggggcagaccggggctcggcctccaagtccaaggagaccacgctg
gacctcaccctgatcctcatcatcgcgcttggctccgtgtctttcgtgttcctcctggcc
atgatcgttttggcggtgcgctgccagaaagacaagaagctcaacatctacacgtgcctg
atgtcgagtggagagtgctgcctgtgctgcagcgcctgctgtagtcgctccgcgagagga
cgcaagcagaagaagttgagcaagtcggacatcatgctggtgcagagcaccaacgtgacc
acgggcgtggggcccgtgggccaggtgcccgtggaggagtctggggtgggaggggtgggc
gggggcttcgggtcccaccaccaccagaaccagaactcgtactgctaccaggtctgcctg
acgcccgagtcggccaagacggacctgatgttcctgaagccgtgcagcccgtcgcgcagc
accgacacggaccacaccaacccctgcggtgccttggtaccgagttacggtgaccagcag
ccggacatcatctctaacggcagcatactctctagcgagactaaacaccaacgagcagag
ctcagttacctggtggaccggcccaggcgcgtgaccagctcggccttccaggaggccgac
atcgtcagttccaaagacagcgggcacggcgacagcgagcagggcgacagcgaccacgac
gccaccaaccggggtcacccagccggcgccgacctgttctccaactgcacggaggagtgc
aaggccctgggccactcggaccgctgctggatgccctccttcgtgggctccgacgcccgc
cagggccccgactaccgaagcaacctgcacgtgcccggcatggacgccacgctccccgac
actgaggtaccgtcgcgacccgccgccgccaccgcccatcacgccgatcacgccgaccag
ctcctcatcgccgccaccaactccacctcctccatggccgccgctacccaccccaccaac
accgccgtcgtggcgcccttgtccggcgccttgtccaacgataggtcgttctccaccttc
ggcaaggacgccacacagaggtcacagtcacaccacagccttaaccgccacctccagccc
tcggcgccgcctcagcagggtccgacgccgccggggccgccgttcagcgccagcacgcta
gagaggaaagagtatgatagggggacactgctgtacaaacccaccttcctctgtgagtat
cagtacgagagctcgctgggaccccaccagttcagtgtggcccagcaccagtactaa
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