KEGG   Gadus morhua (Atlantic cod): 115540513
Entry
115540513         CDS       T10832                                 
Name
(RefSeq) protocadherin-10-like isoform X1
  KO
K16499  protocadherin delta 2
Organism
gmh  Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:gmh04515]
    115540513
Cell adhesion molecules [BR:gmh04515]
 Cadherins
  Protocadherins
   115540513
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 DUF4621
Other DBs
NCBI-GeneID: 115540513
NCBI-ProteinID: XP_030207750
Ensembl: ENSGMOG00000013454
LinkDB
Position
3:complement(28199441..28218663)
AA seq 1098 aa
MICLLLLVLSCLLHGAVSQLHYSVPEEQDPGSVVGNIAEDLGLDITKLSARRFQTVPSSR
TPYLEVNLENGALLVKEKIDREEICKQTIPCLLHLEVFLESPLELFRVEIEVMDINDNPP
SFPETDISVEISESAIPGTRFPVENAFDPDVGTNALNTYAITNNNYFYLDVQTQSDGNKF
AELVLEKPLDREQQAVHRYVLTAVDGGVPQRTGTALLVVKVLDSNDNAPTFDQSVYTVSL
RENSPVGTLVIQLNATDVDEGQNGEIVYSLSSHNAPRIKDLFSIDARTGRIEVSGEVDYE
ESNTHQIYVQAKDLGANAVPAHCKVLVKLVDVNDNTPEIGFSTVTESVSEQDAPGTVIAL
FSVSDRDSAENGQVSCELLGDVPYKLKSSFKNYYTIVTDGTLDRESLDAYTITVVAKDTG
QPSLATSKSIKVHVSDENDNAPRFTQVVYDVYVTENNVPGAFIHAVSALDPDIGPNALIT
YSILECEIQGMSVETYVSINQDTGYLYALRSFDYEQLKEFSFMVQAKDSGVVELLSNATV
NVIIVDQNDNTPTVIAPVGKNGTAREHLPRSAEPGYLVTRVVAMDSDDGENARLSYSIQR
GNEMGMFRMDWRTGELRTARRVSPKRDPQGYYNLLIEVRDHGQPPLSSSASVSVVLVDSV
VEGRGGADRGSASKSKETTLDLTLILIIALGSVSFVFLLAMIVLAVRCQKDKKLNIYTCL
MSSGECCLCCSACCSRSARGRKQKKLSKSDIMLVQSTNVTTGVGPVGQVPVEESGVGGVG
GGFGSHHHQNQNSYCYQVCLTPESAKTDLMFLKPCSPSRSTDTDHTNPCGALVPSYGDQQ
PDIISNGSILSSETKHQRAELSYLVDRPRRVTSSAFQEADIVSSKDSGHGDSEQGDSDHD
ATNRGHPAGADLFSNCTEECKALGHSDRCWMPSFVGSDARQGPDYRSNLHVPGMDATLPD
TEVPSRPAAATAHHADHADQLLIAATNSTSSMAAATHPTNTAVVAPLSGALSNDRSFSTF
GKDATQRSQSHHSLNRHLQPSAPPQQGPTPPGPPFSASTLERKEYDRGTLLYKPTFLCEY
QYESSLGPHQFSVAQHQY
NT seq 3297 nt   +upstreamnt  +downstreamnt
atgatttgtttgctgctgctcgtcctgtcctgcctcctgcacggagccgtttcccagctc
cactactcggttccagaggagcaggacccgggttcggtcgttgggaatatcgcagaggat
ttaggactggacattacgaaactttccgcccggcgcttccagacggtgccaagttcccgg
acgccgtacctggaggtaaacctggagaacggcgcgctgctggtgaaggagaagatcgac
cgggaggagatctgcaagcagaccattccgtgcctattgcacctggaggtgtttttggag
agcccactggagctctttcgggtggagatcgaggtgatggatatcaacgacaaccctccc
agttttcctgagacggacatcagtgtggagatatcggagagcgccattcccgggacccgt
tttccggtggagaacgcgtttgacccggacgtaggcaccaacgcgctgaacacctacgcg
atcacgaacaataactacttttacctggacgtccagacgcagagcgacgggaacaagttc
gcggagctggtgctggaaaagccgctcgaccgggagcagcaggcggtgcaccggtacgtg
ctgacggcggtggacggcggggtgccgcagcgcacgggcaccgcgctgctggtggttaaa
gttttggattccaacgataacgcgcccacgtttgaccagtctgtgtacacggtgagcttg
cgggagaactctcctgtgggcaccctggtcatccagctcaacgccacggacgtcgacgag
ggacagaacggggagatcgtgtactctttgagcagtcacaacgccccgcggataaaggac
ttgttcagcattgacgcgagaaccgggaggatcgaggtgtccggggaggtggactacgag
gagagcaatacgcatcagatatacgtccaggcgaaggacctgggggccaacgcggtgccc
gcgcactgcaaagtcctggtcaagctggttgacgtgaacgacaacacaccggagatcggc
ttcagcaccgtgacagagtcggtgagcgagcaggacgcgccgggcaccgtgatcgccctc
ttcagcgtctccgaccgggactcggcggagaacggccaggtgagctgcgagctcctggga
gacgtgccgtacaagttgaagtcttcgttcaagaactactacaccatcgtgacggacggc
acgctggaccgggagagcctcgacgcgtacaccatcaccgtggtggccaaggacacgggg
caaccctcgttggccaccagcaagtccatcaaagtgcacgtctcggacgagaacgacaac
gcgccgcgcttcacccaggtggtgtacgacgtgtacgtgacggagaacaacgtgccgggc
gccttcatccacgccgtgagcgccctggacccggacatagggcccaacgcgctcatcacc
tactccatattggagtgcgaaatccagggcatgtccgtggaaacgtacgtgtccatcaac
caggacacgggctatctttacgcactgcgctccttcgactacgagcagctgaaggagttc
agcttcatggtgcaggccaaggactctggcgtggtcgagctactgtccaacgccacggtc
aatgtgataatcgtggaccagaacgacaacacgcccaccgtgatcgcccccgtggggaag
aacggcactgcgcgggagcacctgccgcgctcggcggagcccgggtacctggtgacgcgc
gttgtggccatggactcggacgacggcgagaacgcgcggctctcgtacagcatccagcgg
ggcaatgagatggggatgttccgcatggactggaggaccggggagctgaggactgcccgg
cgggtgtccccaaaacgggacccgcagggctactacaatctgctgatcgaggtgagggac
cacggccagcccccgctgtcctcctcagccagcgtgagcgtcgtcttggtggacagcgtg
gtggaaggccgcggcggggcagaccggggctcggcctccaagtccaaggagaccacgctg
gacctcaccctgatcctcatcatcgcgcttggctccgtgtctttcgtgttcctcctggcc
atgatcgttttggcggtgcgctgccagaaagacaagaagctcaacatctacacgtgcctg
atgtcgagtggagagtgctgcctgtgctgcagcgcctgctgtagtcgctccgcgagagga
cgcaagcagaagaagttgagcaagtcggacatcatgctggtgcagagcaccaacgtgacc
acgggcgtggggcccgtgggccaggtgcccgtggaggagtctggggtgggaggggtgggc
gggggcttcgggtcccaccaccaccagaaccagaactcgtactgctaccaggtctgcctg
acgcccgagtcggccaagacggacctgatgttcctgaagccgtgcagcccgtcgcgcagc
accgacacggaccacaccaacccctgcggtgccttggtaccgagttacggtgaccagcag
ccggacatcatctctaacggcagcatactctctagcgagactaaacaccaacgagcagag
ctcagttacctggtggaccggcccaggcgcgtgaccagctcggccttccaggaggccgac
atcgtcagttccaaagacagcgggcacggcgacagcgagcagggcgacagcgaccacgac
gccaccaaccggggtcacccagccggcgccgacctgttctccaactgcacggaggagtgc
aaggccctgggccactcggaccgctgctggatgccctccttcgtgggctccgacgcccgc
cagggccccgactaccgaagcaacctgcacgtgcccggcatggacgccacgctccccgac
actgaggtaccgtcgcgacccgccgccgccaccgcccatcacgccgatcacgccgaccag
ctcctcatcgccgccaccaactccacctcctccatggccgccgctacccaccccaccaac
accgccgtcgtggcgcccttgtccggcgccttgtccaacgataggtcgttctccaccttc
ggcaaggacgccacacagaggtcacagtcacaccacagccttaaccgccacctccagccc
tcggcgccgcctcagcagggtccgacgccgccggggccgccgttcagcgccagcacgcta
gagaggaaagagtatgatagggggacactgctgtacaaacccaccttcctctgtgagtat
cagtacgagagctcgctgggaccccaccagttcagtgtggcccagcaccagtactaa

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