Gadus morhua (Atlantic cod): 115540645
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Entry
115540645 CDS
T10832
Symbol
rhot1
Name
(RefSeq) mitochondrial Rho GTPase 1 isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115540645 (rhot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
gmh03029
]
115540645 (rhot1)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
gmh04031
]
115540645 (rhot1)
Mitochondrial biogenesis [BR:
gmh03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
115540645 (rhot1)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
115540645 (rhot1)
GTP-binding proteins [BR:
gmh04031
]
Small (monomeric) G-proteins
Rho Family
Miro
115540645 (rhot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
EF-hand_7
Arf
Dynamin_N
RsgA_GTPase
EF-hand_1
MMR_HSR1
Septin
AAA
AAA_22
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
115540645
NCBI-ProteinID:
XP_030207973
Ensembl:
ENSGMOG00000011919
LinkDB
All DBs
Position
3:complement(7227260..7241337)
Genome browser
AA seq
661 aa
AA seq
DB search
MRKDVRILLVGESKVGKTSLIMSLVSEEFPEVVPYRAEEITIPADVTPERVPTHIVDYSE
AEQTDEQLFQEISKANVICIVYAVNNKKSIEKVTSHWIPLITDNTDKDNRVPLILVGNKS
DLVEHSSMETILPIMNQYSDIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPERKD
MKPLCVKALTRIFKVSDLDNDGILNDNQLNFFQRTCFNAPLAPQALEDVKNVVRKNVSDG
VRDNGLTLNGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELHQDYLFPQLKVPPDATTE
LNHDAYLFLQGVFDKHDKDRDCALSPEELKDLFDVFPYMPWGADVSNTVCTNDKGWITYQ
GYLSQWTLTTYLDVQRCLEYLGYLGYSIVAEQESQAAGITVTRDKKIDLQKRQTQRSVFR
CNVFGDVCSGKSGFLQAFLGRNLMSQKNIREEHRSFYAISTTYVYGQEKYLLLHEVFPDN
DYMSDADLACDIVCLLYDVSNPYSFEYCAKVFKQYFMDSKTPCMMIAAKSDLPEVKQQYG
CTPLEFCRKHKMPPPQSFTCNTAAAAPSRDIYTKLTTVAMYPHARLRCMCTCNRCTFCLC
QNLLNSELLQTVRTKLYAAVLSRHVSQADLKSSTFWLRASVGAAMFAVLGIAMYRVLLKP
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaagatgtgaggatattattggtgggagaatccaaggtggggaaaacctctctc
atcatgtccctagtcagcgaggagttcccggaagtggttccctaccgagctgaagagatc
accatacctgcggatgtgaccccagagagggttcctacccacatagtagactactcagag
gcagaacagacagacgagcagctgttccaggagatctctaaggccaatgtcatatgcatc
gtctacgctgtgaacaacaagaaatcaattgagaaggtgaccagtcactggattccactc
ataactgataatacagacaaggacaacagggttcctctgatcctggtgggcaataagtcg
gacctcgtcgagcacagcagcatggagacgatcctgcccatcatgaaccagtacagtgac
atcgagacctgcgtggagtgttcagcgaagaacctgaagaacatttcggagctgttctac
tacgcgcagaaggctgtcctccaccccaccggccctctctactgcccggagagaaaagat
atgaagcccctgtgtgttaaagccctgactcgcatctttaaagtgtcggacctggacaac
gacggtatcctcaacgacaaccagctgaacttcttccagaggacgtgcttcaacgctcca
ctggcccctcaagccctggaggacgtgaagaacgtggtgaggaagaacgtcagcgatggc
gtgcgggacaacggcctcacactgaacggcttcctgttcctccacaccttgttcatccag
cgagggcgccacgagaccacgtggaccgtgctgcggcgcttcggctacgacgacgacctt
gagctgcaccaggactacctctttccccagctgaaggtccctccggacgccaccaccgag
ctcaaccatgacgcctacctcttcctgcagggcgtcttcgacaagcacgataaggaccgg
gactgtgccctgtctccagaggagctgaaggacttgtttgacgtgttcccctacatgccg
tggggggccgacgtcagcaacacggtttgcaccaacgacaagggctggatcacctaccag
gggtacctctctcagtggacgttgaccacctacctggacgtccagcggtgcctggagtac
ctgggttaccttggttactccatcgtagccgagcaggagtcccaggcagcggggataaca
gtgacccgggacaagaagatcgacctgcagaagaggcagacccagcgcagcgtcttccgc
tgtaacgtcttcggggacgtctgcagcggcaagagcggcttcctccaagccttcctggga
cgcaacctcatgagccagaagaacattcgagaggagcaccggtccttctacgctatcagt
accacctatgtttacggccaggagaaatacctacttctgcacgaggtcttcccagacaac
gactacatgtccgatgccgacctagcatgtgacattgtctgtctgctctatgatgtcagc
aacccctactcctttgagtactgtgctaaagtcttcaagcaatatttcatggacagcaag
acgccgtgcatgatgatagccgccaagtctgacctcccagaggtcaagcagcagtacgga
tgcactcccctggagttctgccgcaaacacaagatgcccccgccccagtccttcacctgc
aacacagcggcggccgcccccagccgggacatctacaccaagctcaccaccgtggccatg
taccctcacgcccggctgcgctgcatgtgcacgtgcaacaggtgcaccttctgcctgtgc
cagaacctcctcaactctgagctgctgcagacggtccggaccaagctctacgccgcggtg
ctcagcaggcacgtgagccaggcggacctgaagagctccaccttctggctgcgggcaagt
gttggcgcagccatgtttgccgtgctgggtatcgccatgtacagagtcctgctgaaacca
cggtga
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