KEGG   Gadus morhua (Atlantic cod): 115540659
Entry
115540659         CDS       T10832                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
  KO
K15687  E3 ubiquitin-protein ligase makorin [EC:2.3.2.27]
Organism
gmh  Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gmh04121]
    115540659
Enzymes [BR:gmh01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     115540659
Ubiquitin system [BR:gmh04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    115540659
SSDB
Motif
Pfam: zf-CCCH_4 zf-CCCH Torus zf_CCCH_4 zf-C3HC4 zf-RING_2 zf-CCCH_3 zf-RING_UBOX zf-C3HC4_4 zf-CCCH_2 zf-RING_5 zf-rbx1 zf-C3HC4_2 IBR_1 zf-CCCH_PARP12 zf-RING_11 zf-CCCH_DUS3L RING_XB3-XBAT31
Other DBs
NCBI-GeneID: 115540659
NCBI-ProteinID: XP_030208002
LinkDB
Position
1:28130532..28133242
AA seq 362 aa
MDPRTDQFSSLRAGLVCRHYLNGSCRYGSRCNYQHDWPAVPSAQICRYFQKGGCWYGPRC
RYLHIPVTERDASFTSRRSSVPQLYFSSNSLPSSRRGSEPALSHARGLVPRNLRERHNAL
NPQHIGATQQPLDHLIEYGAHSGLEACQELLQSSEVSQESKSPEGSRDANSSSDSGGGAA
AAPEDQEETEAYFESKEVTCGICMDKVYEKMSADERRFGILPSCNHSFCLRCIVTWRKTK
DLQEEVIKGCPQCRVKSAFYVPHNYWVEGPAKETLIASFKEKCRKRRCSYFLRHGCCPFK
AECIYWHDEVQRRRSAHLLQTDYLEDIDPMHILDFVMSITFLHIDDEDEYDLPFHITHGL
SF
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggacccgaggacagatcagttttcatctttgcgtgctggtctagtgtgtcggcactat
ttgaacggttcctgcagatatggttcaaggtgtaactatcaacatgactggccagctgtg
ccttctgctcaaatatgtagatattttcagaagggtggatgctggtacggtccacgctgc
agatatcttcatatccctgtgactgaacgggacgcatcctttacaagcagaagaagttct
gtacctcagctctatttctccagcaacagccttcccagctccagacgagggtctgagccg
gcactctctcacgcccgtggtctcgtcccccgaaacctccgggaacggcacaatgccttg
aacccacagcacattggggccacacaacagccgctcgatcatctaatagaatatggtgct
cactctggtcttgaggcttgccaggaattgcttcagagttcagaagtgtctcaggaatca
aagtctccagaaggtagtcgggatgctaacagcagtagtgacagtggtggtggtgccgct
gctgctcctgaagaccaggaggaaactgaagcctacttcgaaagtaaagaagtgacctgt
ggcatctgcatggataaagtctatgaaaagatgagcgcagatgagcgacgctttggcatc
ctgcccagctgcaatcactccttctgtttaaggtgtattgttacatggaggaaaacaaaa
gacttgcaggaggaggtcattaagggttgtcctcaatgcagggtgaaatctgcgttctat
gtgccacataattactgggtagagggcccggcgaaggaaactctcattgcatccttcaaa
gagaaatgcagaaaaagaagatgtagttattttctgcgccatggatgctgccccttcaaa
gcagagtgcatttattggcatgacgaagtgcaacgtcgtcgttctgcacacttgcttcaa
acggactaccttgaagatattgaccccatgcacatcctggatttcgtcatgtccatcacc
tttttgcacattgatgatgaagatgaatatgatcttccttttcacattacccatggcctc
agcttctga

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