Gadus morhua (Atlantic cod): 115540675
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Entry
115540675 CDS
T10832
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115540675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115540675
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115540675
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115540675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-RING_UBOX
zf-C3HC4
zf-RING_Vps41
zf-RING_2
WWE_5
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
115540675
NCBI-ProteinID:
XP_030208019
Ensembl:
ENSGMOG00000007168
LinkDB
All DBs
Position
3:complement(26108800..26123250)
Genome browser
AA seq
689 aa
AA seq
DB search
MAYNNMLLAPAVVVWEWLNEHGRWRPYGPAVSHHIEAAIRNSDPRGGSVVLGQVDSRLSP
YIIDLQSMHQFRQDTGTIRPVRRCFYEPGTAPAQGVQWEWESSTGAWTTYDMEASIAIHK
AHSRQQAGLDLEPLGLAQLIDFSTMTQVNRQSGRCRRLRRRVDMAYPLVSGPLPRGAPRF
GGGALLGVGVAGSNAGNAPFPNGPAAGPAPSCDCQQCVLVRSVKSGGVQTLGRRTKRLPA
PPPQAPPRSATLGHAPRQSCDWQLPHGLAISRNTASPRKNAQLFAQSLAALSVSSALTSG
SADRPSRSANRDAPHADRPVPIATLVTPATVVTTPPSPVPSPSPVVMKPNGDVSLVPLPR
RSSLAGLSRPALQRIARAQNRTLLAAGIPMVPVKNIKPSSLIQPALAGITGTLMSAAGLP
VCLTRPPEDHPLVPKNLLRPVPGFTSCCRKTSKKQTRKGRSPEEVVRRYVLKVKTPQDQD
CPICMDPLAGPAGYVGPQTGSSARADTVVRLAECGHVQHLGCLLAHYDASCRDGSLQCAI
CKTVYGVRTGNQPAGKMQFHVIPPSLPGYPDCKTIRIVYNIPAGTQGPEDVNPGKPFTAR
GFPRHCYLPDTPKGRQVLGLLVVAWERRLVFTVGRSCTSGEEDTVVWNQVHHKTEFGSNL
TGHGYPDPGHLDSMVDQLRALGVGPDDLL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcctataacaacatgctgctggcccccgccgtggtcgtatgggaatggctgaacgag
cacggccgctggcggccctacggcccagccgtgtcccatcacatcgaagcggccatacgg
aacagcgaccccagaggaggaagcgtggttctcggccaggtggacagccggctctcgcca
tacatcatcgacctccagtccatgcaccagttcagacaagacacgggcaccatccgtccc
gtgaggcggtgtttctacgagccggggaccgccccggcgcagggcgtgcagtgggagtgg
gagagctccacgggggcctggaccacctatgacatggaggcgtccatcgccatccacaag
gcccacagccggcagcaggccgggctggacctggagcccctcgggctggcccagctcatc
gacttcagcaccatgacccaggtgaacaggcagagcgggcggtgtcggaggctgcggcgg
cgcgtggacatggcctaccccctggtgtcggggcccctcccccgcggagcgcccaggttt
gggggcggggccctgttgggggtgggtgtggccggctccaacgccgggaacgcccccttc
cccaacggcccggccgcgggccccgccccctcctgcgactgccagcagtgcgtgctggtc
cggagcgtgaagagcgggggggtgcagacgctgggccgacgcaccaagaggctccccgcc
ccgccccctcaagccccgccccgctccgccacgctgggccacgccccccggcagagctgc
gactggcagctgccgcacggcctggccatctcccgcaacaccgcctcgccgcgcaagaac
gcccagctcttcgcccaatcgctcgccgccctcagcgtgagctccgccctcacctcgggc
tccgccgacaggccgtcccgatcggccaaccgggacgccccgcacgccgaccgaccggtg
cccatcgccacgctggtgaccccggcgacggtcgtgaccacgcccccctcccccgttccg
tctccctctcccgtggtgatgaagcccaacggcgatgtcagccttgtcccgttgccgcgg
cgatccagtctagccgggctgagccgaccggcgctccagcgaatcgcccgggcccagaac
agaactctgctggctgctggcattccgatggtgccggtaaagaacatcaagccctccagt
ctgatacagccagccctagcaggcatcaccgggaccctgatgagtgcagcaggacttcct
gtgtgtctgacccgccctccggaggaccaccccctcgtccccaagaacctgctcagaccg
gtcccggggttcacaagctgctgccgcaagaccagcaagaaacaaacgcgcaagggccgc
agccccgaggaggtggtgaggaggtacgtgctgaaggtcaagaccccccaggaccaggac
tgtcccatctgcatggaccccctcgcggggccggccgggtacgtgggcccccagacgggg
tcctccgcccgggctgacacggtggtccggctggccgagtgtggccacgtccagcacctc
ggctgcctgctggcccactacgacgccagctgcagggacggcagccttcagtgtgcgatc
tgtaagacggtctacggggtgaggaccgggaaccagccggcagggaagatgcagttccac
gtcatccccccctccctccctggttaccccgactgcaaaaccatccgcatcgtctacaac
atcccagctggtacccagggtccagaggacgtgaacccgggcaagcccttcacagcgcgg
gggttccccagacactgctacctcccggacacgccgaagggacgacaggtgttgggtctg
ctggtggtcgcctgggagcgcagactcgtcttcactgtgggaaggtcctgcacctcggga
gaggaagacacggtggtgtggaaccaggtgcaccataagacagagtttggctccaacctg
acgggtcacggctaccccgaccccggacacctggactccatggtggaccagctcagggcc
ctcggagtcggccccgacgacctgctctga
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