Gadus morhua (Atlantic cod): 115540917
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Entry
115540917 CDS
T10832
Symbol
glb1
Name
(RefSeq) beta-galactosidase
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh00052
Galactose metabolism
gmh00511
Other glycan degradation
gmh00531
Glycosaminoglycan degradation
gmh00600
Sphingolipid metabolism
gmh00604
Glycosphingolipid biosynthesis - ganglio series
gmh01100
Metabolic pathways
gmh04142
Lysosome
Module
gmh_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
115540917 (glb1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
115540917 (glb1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
115540917 (glb1)
00604 Glycosphingolipid biosynthesis - ganglio series
115540917 (glb1)
00511 Other glycan degradation
115540917 (glb1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115540917 (glb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmh04147
]
115540917 (glb1)
Enzymes [BR:
gmh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
115540917 (glb1)
Exosome [BR:
gmh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115540917 (glb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
115540917
NCBI-ProteinID:
XP_030208444
Ensembl:
ENSGMOG00000016198
LinkDB
All DBs
Position
3:16887625..16895391
Genome browser
AA seq
646 aa
AA seq
DB search
MILSSFLRIGAVVLVLLGNSLGALRSFSIDYKNDCFRKDGEEFRYISGSIHYSRIPRVYW
KDRLLKMYMAGLNTIQTYVPWNFHEPSPSQYIFNGDRDLEHFLQLAQDIGLLVILRPGPY
VCAEWDMGGLPAWLLMKKDIVLRSLDPDYIAAVDTWMGKLLPMMKPFLYQNGGPIISVQV
ENEYGSYFTCDYNYMRHLSKLFRGHLGEEAVLFTTDGAGLGYLKCGSIQGLYATVDFGPG
GNVSAAFAAQRHVEPRGPLVNSEFYAGWLDHWGSHHSTVSTAVLAKSLNEILALSANVNL
YMFIGGTNFGYWNGANNPYAPQPTSYDYDAPLTEAGDLTDKYFAIREVIKMYRKIPDGPI
PPSTPKYAYGAVKMTKVQTVMSALEILSFSGPVKSIHPMSFIELNQAFGFVLYRTKLPVN
CSSPTPLSSPLNGVHDRAYVSVDGVPMGVLERDKVLTINITGSSGGQVDLLVENMGRINY
GRGMNDFKGLVSNLTLGKDVLSGWTMYSLNIDEAVSKGLIQQTKVPGSSQPTSFSLPAFY
RGSFLIPDGIPNLPQDTYVQFPGWIKGQVWINGVNLGRYWPSRGPQVTLFVPASVLSTAD
PNNVTVLELEASPCTTGPCVVEFTKTPILNATVSSAHCQRLFLRGG
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgatactgtcttctttccttcgtatcggcgccgttgtactggtgctcctgggaaattca
cttggggcactgcggtcatttagcatagactacaaaaacgactgctttcgcaaggatggc
gaggaattccgctacatatctgggagcatccactacagccggatacccagagtgtactgg
aaggaccgcctgctgaagatgtacatggctggactaaataccattcagacatatgttccc
tggaacttccacgagccgtctccaagtcagtacattttcaatggagacagagacctggag
cactttcttcagctggcccaagacatcggtttactggttattctgcggcctgggccctac
gtatgcgcagagtgggatatgggtggcttgcctgcctggcttctcatgaagaaagacata
gtgctgcgctctttagacccggattacattgcagcggtggacacatggatgggaaagttg
ctaccgatgatgaaacctttcctatatcagaacggagggccgattatatccgtccaggtt
gaaaacgaatatggcagctacttcacatgtgactacaactacatgcgtcacctgtccaag
ttattccggggacacctgggggaggaggcggtgctgttcaccactgacggcgcgggtctt
gggtacctcaagtgcggctccatacagggtctttatgcgactgtggactttggtccaggc
ggtaacgtcagtgctgcattcgctgcccagagacatgtggaaccccgtggaccgctggtg
aactcagagttttacgctgggtggctggaccactgggggagccaccactccaccgtttca
acagccgttttggccaagtctctcaatgagatcttggccctcagcgccaatgttaactta
tacatgtttatcggggggactaattttggatactggaacggtgcgaataacccgtacgcc
ccacagcccaccagctatgactacgatgccccgctcacagaggccggtgacctcactgac
aagtactttgccattagagaagttattaaaatgtatcggaagataccagatgggccaatc
cctccatccactccaaaatacgcttatggggctgttaagatgacaaaggtccagacagtc
atgagtgccttggaaatactgtcattctcgggaccggtgaaaagcatacatccaatgagc
ttcattgaattaaatcaggcctttgggtttgtcctctacaggaccaagctcccggttaac
tgcagctcaccaactcccctttcctccccactgaatggagttcacgatcgggcgtacgtg
tcagtcgatggggtgccaatgggagtcctggagagggacaaagtgttgactatcaacata
acaggaagctctggaggtcaggttgacttgttggtcgagaacatgggccgcatcaactat
ggaaggggcatgaacgacttcaagggcttggtgtccaacttgacattaggcaaagatgtg
ctgagtggctggaccatgtacagtctgaatatcgatgaggcagtcagcaaggggctcata
caacagaccaaggtgccaggctccagccagccaaccagcttctccctgccagccttctac
aggggaagcttcctgatacctgatggcatcccaaacctgccccaggacacctacgttcag
ttcccgggctggattaagggccaggtttggattaacggcgtcaacctggggcgctactgg
ccctcccggggaccccaggtgaccctctttgtgccggccagcgtcctcagcacggcggac
ccaaacaacgttacggtcctggagctggaggcgtccccctgtaccacgggaccctgcgtg
gtggagttcaccaagacccccatcctgaacgccactgtctcctcggcccactgccagagg
ttgttcctcagaggcggctag
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