Gadus morhua (Atlantic cod): 115540943
Help
Entry
115540943 CDS
T10832
Symbol
snrpe
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115540943 (snrpe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmh03019
]
115540943 (snrpe)
03041 Spliceosome [BR:
gmh03041
]
115540943 (snrpe)
03032 DNA replication proteins [BR:
gmh03032
]
115540943 (snrpe)
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
115540943 (snrpe)
Spliceosome [BR:
gmh03041
]
Complex A
U1 snRNP components
Sm proteins
115540943 (snrpe)
U2 snRNP components
115540943 (snrpe)
Complex B
U1 snRNP components
115540943 (snrpe)
U4/U6.U5 tri-snRNP components
115540943 (snrpe)
Complex C
U2 snRNP components
115540943 (snrpe)
DNA replication proteins [BR:
gmh03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
115540943 (snrpe)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
DUF777
Motif
Other DBs
NCBI-GeneID:
115540943
NCBI-ProteinID:
XP_030208483
Ensembl:
ENSGMOG00000036448
UniProt:
A0A8C4ZNZ3
LinkDB
All DBs
Position
1:4039724..4043536
Genome browser
AA seq
93 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEVHMKTKNRKPLGRVMLKGDNITLLQSVVVT
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagaggacaaggacagaaggtgcagaaggttatggtccagccgatcaacctc
atcttcagatatctacaaaatcgttcacggatccaggtgtggctgtatgaacaagtgaac
atgcggatagaaggctgcattattggctttgatgagtacatgaacctggttctcgatgac
gctgaggaagtccacatgaagacaaagaacagaaaaccccttggcagggtcatgttgaaa
ggggacaacatcaccttacttcaaagtgtggtcgtaacctga
DBGET
integrated database retrieval system
