Gadus morhua (Atlantic cod): 115541317
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Entry
115541317 CDS
T10832
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Pattern recognition receptors [BR:
gmh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115541317
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115541317
NCBI-ProteinID:
XP_030208868
Ensembl:
ENSGMOG00000035279
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Position
4:40078768..40090936
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AA seq
1078 aa
AA seq
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MHGKKIQDLSNIHNPGSCFSKRVQQQRADSPGPSCVSMKSDWSMEEPWNFKDGRPSREER
QENERSKVTSARSVQQHPTELMKMRPLQCEESEEDEDKVDGTCCQRKIKALLKKKLRCVF
EGIAGAGQPTGLNDFYTEIFITERGSGEVNKEHEVRLIETASRKPAKEETPIKCEDIFEP
LPGRDQPIRTIMTTGVAGIGKTVLTHKFTLDWAEGKTNQDIHFTFHFTFRELNLLKGKEF
SLVELLHHFFIATKEVGICRYDQYQVIFILDGLDECRLPLDFQNNPIWTDVTEPTLVDVL
LTNLIRGHLLPSARIWITTRPAAANQIPAECVDMVTEVRGFTDPQKEEYFRKRFRDEKLA
NTIISHVKKSRSLHIMCHIPVFCWITATVLEDLFKKSQGGEEMPKTVTQMYSHFLRVQSI
QADRKYLGRAETDPHWSSQSREIIFSLGKLAFNQLEKGNLVFYEADLAECDINIKAASVY
SGVFTQIFKEECGLYQDKVFCFVHLSLQEFLAALYVFLSFINDGINLLYERKRKKGSLSG
FFRPESSRVKLKGNIYQSAVDKALQSENGHLDLFLRFLLGLSLEANQIVLRGLERRGGRD
SWTKEKIVSYIKKKIDVDLSPERSINLFHCLSELNDHHLVEEIEQCLTSGSLSRDHLSPA
QWSALVFIILSSEEELDVFDLNKYSASEKGLLRLLPVVKASKTSLLTGCHLSERCCEALA
SVLSSNSSRLREMDLSTNDLQDSGVKLLSAGLGSPHCTLVTLRLNGCNLSERCCEALASV
LSSNSSSLRKLDLSNNDLQDSGVKLLSAGLGSPHCMLETLSLSGCLVTQEGCGSLASALS
SNPSHLRELDLSYNHPGDSGAAVLSAGLEDPHWRLDTLSVENSGGWRLKPGVKKYACELT
LDLNTAYTGLSMTIDKRKVTWTEKDKVRPLRPERFDYCEQVLCREVLTGRCYWEAEWKGE
VCIGVTYRGITRTGVAAVSELGGNDKSWSLHCADGGYSAWYNGSRTVLPLPPAGSSIVGV
YLDRPAGSLSFYRVSPGGGGSSDTLTHIHTFWSSFTQEDLLSWFMFLYEGSSMSLCRL
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgcatggtaaaaaaatacaggatctatcaaacattcataatcctggttcctgtttttct
aaaagagtccagcagcagagagcagactcccctggacccagctgtgtctccatgaagagt
gactggtctatggaagaaccttggaactttaaagatggacgaccctccagagaggagagg
caagaaaacgagaggtcaaaggttaccagtgctcggtctgtacagcagcatccaacagag
ctgatgaagatgaggcccttacaatgcgaggagagcgaggaggacgaggacaaggtggat
ggaacttgctgccaacgtaaaattaaggctcttctgaagaagaagttgaggtgtgtgttt
gagggaattgctggagcaggacagccaacaggtctgaacgacttctacacagagatcttc
atcacagagagaggaagtggagaggtcaacaaggaacatgaggtcagactgattgaaaca
gcctccaggaaaccagcaaaggaggaaacaccaataaaatgtgaagacatctttgaaccc
ttacctggacgagatcaaccaatcagaacaataatgacaactggagtggccggcattggt
aaaaccgtcttaacacacaagttcactctggactgggctgaaggcaaaaccaaccaagac
attcacttcacatttcacttcactttcagagagctgaatttactgaaagggaaagagttt
agcttggtggaacttcttcatcacttctttattgcaaccaaagaagtaggaatctgcaga
tatgaccagtaccaagtcatcttcatcttggatggtctggatgagtgtcgacttcctctg
gacttccagaacaacccgatctggactgatgtcacagagccgaccttagtggacgtgctg
ctgacaaacctcatcaggggccacctgctaccctccgctcgcatctggataaccacacgc
cctgcggcagccaatcagatccctgctgagtgtgttgacatggtgacagaggtgagaggg
ttcaccgacccacagaaagaggagtacttcaggaagagattcagagacgagaagctggcc
aacacaatcatctcccatgtgaagaaatcacgaagcctccacatcatgtgtcacatccca
gtcttctgttggatcactgctacagttctggaggacctatttaaaaagtcccagggagga
gaagagatgcccaagaccgtgactcagatgtacagccacttcctgagggttcaatccata
caggcggacaggaagtaccttgggagggctgaaacagatccccactggagttcacagagc
agggagatcattttttctcttggaaaactggcttttaaccagctggagaaaggcaacttg
gtattctatgaggcagacctggcagagtgtgacatcaatatcaaagcagcctcagtttac
tctggagtgttcacccagatctttaaagaggagtgtgggctgtaccaggacaaggtgttc
tgctttgtccatctgagcctccaggagtttctggctgccctttatgtctttctgtccttc
atcaatgatggtataaatctgctctatgaaagaaaaagaaaaaagggtagtttatctggg
ttttttcggccggagtctagtagagttaaactcaagggtaacatctaccagagtgctgtg
gacaaggcattacagagtgagaatggacacctggacttgttcctccgcttcctcctgggc
ctctctctggaggccaatcagattgtcctacgaggtctggagagacgaggtggaagagac
tcatggaccaaggagaaaatagtgtcttacatcaagaaaaagatagatgtagatctctct
ccagagagaagcatcaacctgttccactgtctgagtgagctgaacgaccatcatctagtg
gaggagatcgaacagtgcctgacatcaggaagtctctccagagaccatctctcccctgct
cagtggtcagctctggtcttcatcatactgtcgtcagaagaggagctggacgtgtttgac
ctgaataagtactctgcttcagagaagggtcttctgaggctgctgccagtggtcaaagcc
tccaaaacatctctgctgactggctgtcatctgtcagagagatgctgtgaagctctggcc
tcagttctcagctccaactcctctcgtctgagagagatggacctgagtaccaatgatctg
caggattcaggagtgaagctgctctctgctggactggggagtccacactgtacactggta
actctcaggctcaatggctgtaatctgtcagagagatgctgtgaagctctggcctcagtt
ctcagctccaactcctctagtctgagaaagctggacctgagtaacaatgatctgcaggat
tcaggagtgaagctgctctctgctggactggggagtccacactgtatgctggaaactctc
agcttgtctggctgcctggtcacacaggaaggctgtggttctctggcctcagctctgagc
tccaacccctcccatctgagagagctggacttgagctacaatcacccaggagactcagga
gctgcggtgctctctgctggactggaggatccacactggagactggacactctcagtgtg
gagaacagtggagggtggaggctgaaaccgggtgtaaagaagtatgcctgtgaactcaca
ctggatctaaacaccgcctacacaggactctctatgactattgacaaaagaaaagtgact
tggacggaaaaagacaaggtgcgtcctcttcgcccagagagatttgactactgtgagcag
gtgttgtgtagagaggttctgactggccgctgttactgggaggcagagtggaaaggagag
gtttgtatcggagtgacatacagagggatcacaaggacaggagtggctgctgtcagcgag
cttggaggaaacgacaagtcctggagtcttcattgtgctgatggtggttactctgcctgg
tacaacggtagtagaacagtcctccctctcccccccgctggctccagcatagtaggagtg
tatctggaccggcctgctggctctctgtccttctacagagtgtccccaggtggaggaggg
tcctcagacacactgacacacatccacaccttctggtcctccttcacccaggaggacctc
ctctcttggtttatgttcttgtatgaaggttcctcaatgtctttgtgtcggttgtag
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integrated database retrieval system
