Gadus morhua (Atlantic cod): 115541390
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Entry
115541390 CDS
T10832
Symbol
erbin
Name
(RefSeq) erbin isoform X1
KO
K12796
erbb2-interacting protein
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115541390 (erbin)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
LRR_1
PDZ
LRR_LRWD1
LRR_5
PDZ_2
PDZ_6
LRR_Zer-1
LRR_At5g56370
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
115541390
NCBI-ProteinID:
XP_030208938
Ensembl:
ENSGMOG00000017876
LinkDB
All DBs
Position
4:complement(17051936..17094743)
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AA seq
1434 aa
AA seq
DB search
MSKRNLFVRLVPCRCLRGEEEPVTSLDYSHCSLETVPKEIFGFEKSLQELHLDANQIEEL
PKQLFNCQLLQRLSMPDNDVTVLPSAIANLINLRELDVSKNNIQEFPENIKNCKVLTIVE
ASVNPISKLPDGFTQLLSLTQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMH
KLTQLERLDLGSNEFTEVPEVLEQLSGIKELWMDCNRLTFLPGMIGMLKQLAYLDVSKNN
LEMVDEQICGCESLQDLLLSNNALTTLPGSIGSLKKLTALKVDENQLMYLPDSIGGLSSL
DELDCSFNEIEALPATIGNCVHIRTFAADHNFLTQLPSEIGSWKNITVLFLHSNKLECLP
EEMGNMQRLRVVNLSDNKLKNLPYSFTKLNQMTAMWLSENQSKPLIPLQKEEDPETHHTV
LTNYMFPQQTRAEEYTPNSDTESFNPSLWEEQRKQRAQVAFECDEDKDEREMPPREGNLK
RYPTPYPDELKNMVKTAQSVAHRLKEDEAGEGSGRDGRPQERNHIGIQDVGVKVIEAPSA
NGQAVDAEPISHADDSTAPKDSSESYSSQKTPYKSSDPSMMRHEDTLEDSEDLSDEEEEM
KVAEMRPPLIEISINQPKVVTLSKDKKDDGKDADSLLDDTVANSNQNNSNCSSPSRMSDS
VSLTTDSSQENSLCTPEKEAKMPFLPKSRLEDENMNPAKETSPFLHNGNGSASSLQAALR
SQRALPPGPLGDYDLSVEARLSFLKRGVDEVNNGAVDGYTRWDQINMNVSLPPPPPPATD
NVGRPDDPARYTRGQSQADEGRGHYGNNNNNGEPLENGGRRGVGERLNGVGGGVDASLSR
STEELSPEKRLLAPPTVAKAQSIGNMESGGGGGGVGMRLYSIDAGVRDDACDGQATGRAM
MMDAAAAAQGQSIVRSKSASLLNEQNLQVYPGSSSSSSDLLAANKPAAAASSSSSRYPVA
SSMALGLPPPQYNIQYSSGGQPPPAGPKDGLWTQRTAVPPELQGYPAGPPPPSQQQQQQN
SLANTNYSNRNQALPPGYPARAPGDMWAKDRLQPSGPSSGGPPGPGRSSTLQRQSSGSSA
VSMGRYQLPEGEYMTYRDIHTLGRGPLAMSHALQRPLSARTYSMDAPASARPPGGRPPPQ
DHLLPERTMSVSDFNYQHLSPSKRPGGRVRSEHSLLDGGPLLGPGSRGPVPTDWRDQVMR
HIEAKKMEKNALSRSYNSAHAPLGWSHHHQHPGGGRRAMHASQGSLLSSPRDGLSLGPSG
FCDDVFSIPGQQSYTLDPHRNVPLVNGQMGPGPALRPNLSQNSMARHPSREQLIDYLMLK
VSQQPGQPGPHGPPRMPQEALQEMCVKVEKSPELGFSISGGVGGRGNPFRPEDNGIFVTR
VQTEGPASKVLQPGDKILQANGYSFVNIDHGYAVSLLKTFPSTVDLIILRDMLS
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggaacctgtttgtccgtctggtgccatgccgatgcctgcgaggcgaggag
gagcccgtcacctcgctggactactcccactgcagcctggagacggtgcccaaggagatc
ttcggcttcgagaagagcctgcaggagctccacctcgatgccaaccagatcgaggagctg
cccaaacaactgttcaactgccagttgctgcagcggctgagcatgccagataatgacgtg
acggtgttgccgtcggccatcgctaacctcatcaatctcagggagctagacgtcagcaaa
aacaatatccaagagtttccagagaacatcaagaactgcaaggtcttgaccatcgtggag
gccagcgtgaatcccatatccaagctgccagatggcttcacccagctcctgagcctgacc
cagctctacctaaacgatgccttcctggagttcctgccagccagcttcggcaggctgacg
aaactgcagatcttggagctgcgagagaaccagttaaagatgttgccaaaaagcatgcac
aaactcacccagctggagaggctggacctagggagcaacgagtttactgaagtgcctgag
gtgctggagcagctgagtgggatcaaggagctgtggatggactgcaaccggctcaccttc
ctacctgggatgattggcatgctgaagcagctggcctacctggacgtgtccaagaacaac
ttggagatggtggacgagcagatctgtggctgtgagagcctgcaggacctcctgctgtca
aacaacgccctcacaacgctacccggctccataggctcccttaagaaactcacagctctc
aaggtggatgagaaccagttgatgtatttgccggactccatcggagggctcagctccctg
gacgagctggactgcagcttcaacgagatcgaggcgctgcccgccaccatcgggaactgt
gtccacatccggaccttcgccgccgaccacaacttcctcacccagctgccctctgagatt
ggcagctggaagaatatcactgtgctcttcctgcactccaacaagctggagtgtctgccc
gaggagatgggcaacatgcagcgcctccgtgtggtcaacctcagcgataacaagttgaag
aatctcccctacagcttcaccaagctcaatcagatgactgctatgtggctctcggaaaac
cagtccaagcccctgatccccctgcagaaggaggaggaccctgagacccatcacacggtg
ctcaccaactacatgttcccccagcagacccgggccgaggagtacacccccaactctgac
acggagagcttcaacccgtcgctgtgggaagagcagaggaagcagagagcccaggtggcc
ttcgagtgtgacgaggacaaggacgagagggagatgccccccagggaggggaacctgaag
cgctaccccaccccgtacccagacgagctgaagaacatggtgaagacggcccagtccgtg
gcccaccgcctcaaggaggacgaggccggagaggggtccggcagggacggccgcccccag
gagaggaaccacatcggcatccaggacgtgggcgtcaaggtgattgaggcccccagcgcc
aacggccaggccgtggacgcggagcccatctcccacgccgacgactccaccgcccccaag
gacagctccgagtcctacagctcccagaagaccccctacaagtcctcggacccctccatg
atgaggcacgaggacacgctggaggactctgaggatctgtctgatgaagaggaggagatg
aaggtggcggagatgaggccgcccctcattgagatctccatcaaccagcccaaagtggtg
accctcagcaaggacaagaaagacgacgggaaggacgccgactccctcctggacgacacg
gtcgccaacagcaaccagaacaacagcaactgctcgtcgccgtcgcgcatgtcggactcg
gtctccttgacgacggacagcagccaggagaactccctctgcacccccgagaaggaggcc
aagatgcccttcttgcccaagagcaggctggaggacgagaacatgaacccggccaaggag
acgtcgccgttcctccacaacggcaacggctcggcctcgtccttgcaggcggcgctgcgc
tcccagcgcgccctgccccccggcccgctgggcgactacgacctgtcggtggaggcccgc
ctctccttcctgaagaggggcgtggacgaggtgaacaacggcgcggtggacggctacacg
cgctgggaccagatcaacatgaacgtctccctgccgccgccgccgccgcccgccaccgac
aacgtggggcgtcccgacgacccggccaggtacacccgcggccagtcgcaggcggacgag
gggcgcggtcactacggcaacaacaacaacaacggggagcccctggagaacggcggccgg
cggggcgtcggcgagcgtctgaacggagtggggggtggcgtggacgcgtccctctcgcgc
agcacggaggagctgtcccccgagaagcggctcctggccccgcccacggtggcgaaggcg
cagagcatcggcaacatggagagcggcggcggcggcggcggcgtggggatgaggctgtac
tccatcgacgccggtgtccgtgacgacgcctgcgacgggcaggcgaccggccgggcgatg
atgatggatgcggcggcggcggctcagggccagagcatcgtccggagcaagtcggcctcg
ctgctcaacgagcagaacctccaggtgtacccgggctcctcgtcctcctcctcggacctc
ctcgccgccaacaagcccgccgccgccgccagcagcagcagcagccggtaccccgtggcc
tccagcatggccctgggcctgccccccccccagtacaacatccagtactccagcggcggc
cagccccctcccgcgggccccaaggacggcctctggacccagcggaccgccgtccccccc
gagctccagggctaccccgccggccccccgccgccgtcgcagcagcagcagcagcagaac
tccctggccaacaccaactactccaaccgcaaccaggcgctgccgcccggctacccggcg
cgggcccccggggacatgtgggccaaggaccggctgcagccctccggcccctcctcgggg
ggccccccggggcccggccgcagcagcaccctgcagcggcagagcagcggctcctcggcc
gtctccatggggcgctaccagctgcccgagggcgagtacatgacctaccgggacatccac
acgctgggccggggcccgctggccatgagccacgccctgcagcggcccctgtcggcgcgc
acctacagcatggacgcgccggcctcggcgcggcccccgggcggccggcccccgccccag
gaccacctgctgcccgagcggaccatgtcggtcagcgacttcaactaccagcacctcagc
cccagcaagaggcccgggggacgcgtgcgctcggagcactcgctgctggacgggggcccc
ctgctggggcccgggtcccgggggcccgtgcccaccgactggagggaccaggtgatgagg
cacatcgaggccaagaagatggaaaagaacgcgctgtctcggtcctataattcggctcac
gccccgctgggctggtctcaccaccaccagcacccgggcgggggccgtagggccatgcat
gccagccagggctctctgctcagtagtccgcgggacggcctgtccctcggaccctcgggt
ttctgcgacgacgtgttcagcatcccgggccagcagagttacaccctggaccctcacaga
aacgtgcctctagtgaacggccagatgggcccaggcccggccctgcgtcccaacctgagc
cagaactccatggcgcgccacccgtcccgcgagcagctcatcgactacctgatgctcaag
gtgtcccagcagcccggacagcccggaccgcacggccccccgcgcatgccccaggaggcc
ctccaggagatgtgtgtgaaggtggagaagagtccggagctgggcttcagcatatcgggt
ggagtgggcgggcgaggaaaccccttccgaccggaggataacgggatcttcgtgaccagg
gtccagacagaggggccggcctccaaggtccttcaacctggcgataagattctccaggcg
aacggctacagctttgtgaacatcgatcacgggtacgcggtctccctcctgaagacgttc
ccaagcactgtggacctgatcatcctgagagacatgctgtcatag
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