Gadus morhua (Atlantic cod): 115541439
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Entry
115541439 CDS
T10832
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Pattern recognition receptors [BR:
gmh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115541439
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GFIT
Other DBs
NCBI-GeneID:
115541439
NCBI-ProteinID:
XP_030209036
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Position
4:2245500..2262105
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AA seq
936 aa
AA seq
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LKKKFRRVFEGIPKAGQPTGLNDFYTELFITERGSGEVNKEHEIRLIETSSRKPAKEETP
IRCENIFKPLPGQNQPIRTIMTTGVAGIGKTILTNKFTLDWAEGKANHDIHFTFLLTFRE
LNLLKEREFSLVELLHHFFIETKEAGICRFHRFQVVFILDGLDECRLPLNFQTNPIWTDV
TKSTSVDVLLTNLIRGVLLPSALIWITTRPAAANQIPAECVDMVTEVRGFTDPQKEDYFR
KRFEEETLANTIISHLKKSRSLHIMCHIPVFCWITATVLEDCLKKSQIGEEMPKTVTQMY
SYFLRVQSIQGDRKYHGRAETDTDWSSESREMIVTLGKLAFNQLEKGNLIFYEADLAECG
IDIRAASVHSGVFTQIFKEECGLYQDKVFCFVHLSIQEFLAALYYILSFLDIGVKLLSEK
QQTYREQELLLLYQKVVDKVLKSENGHLDLFLRFLLGLSLETNQNYLQGLLGKTGSGPVF
QQGIVSYIKEKINEDLSPERSINLFHCLNELNDRSLVEQIQLSLTSGSLFKKRVSPAQWS
ALVFILLSSEEELEKFDLKKYSASEEGLLRLLPVVKVSKTSLLNDCHLSERCCEALASVL
SSNSSSLRELDLSTNDLQDSGVKLLSAGLGSPHCTLETLRLTGCHLSERCCEALASVLSS
NSSSLRELDLSNNDLKDSGMKLLSAGLGSPHCTLETLSLSGCVVTQEGCASLASALSSNP
SHLRGLDLSYNHPGDSGAALLSAGLEDPRWRLDTLSVEHGGVWRLKPALKKYACDLTLDP
NTAHRRLSLSEDNRKVTDVEEDQSYPDHPDRFDSQLQVLGREALTGRCYWEVEWEGWVEI
GVTYRGITRRGRGGDSWLGQNNKSWSLYCHDGCDEEDPYSACYNGTETLLPLHAAGSTRV
GVYLDRPAGSLSFYRVSPGGGGSSDTLTHIHTFWSS
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaagaagttcagacgtgtgtttgagggaatccctaaagcaggacagccaacaggt
ctgaatgacttctacacagagctcttcatcacagagagaggcagtggagaggtcaacaag
gaacatgagatcagactgattgaaacatcttccaggaaaccagccaaggaggaaacacca
atcagatgtgaaaacatctttaaacccttacctggacaaaatcaaccgataagaacaata
atgacaactggagtggccggcattggtaaaaccatcttgacgaacaagttcactctggac
tgggctgaaggcaaagccaaccatgacatacacttcacatttctcctcactttcagagag
ctgaatttactgaaagagagagagtttagcttggtggaactgcttcatcacttcttcatc
gagaccaaagaagcaggaatctgcagattccaccggttccaagttgtcttcatcttggat
ggtctggatgaatgtcgacttcctctgaactttcagacaaacccgatctggactgatgtc
acaaagtccacctcggtggacgtgctgctgacaaacctcatcaggggcgtcctgcttccc
tccgctctcatctggataaccacacgccctgcggcagccaatcagatccctgctgagtgt
gttgacatggtgacagaggtgagagggttcaccgacccacagaaggaggactacttcagg
aaaagatttgaagaggagacactggccaacacaatcatctcccaccttaagaaatcacga
agcctccacatcatgtgtcacatcccagtcttctgttggatcactgctacagttctggag
gactgcttaaaaaaatcccagataggagaagagatgcccaagactgtgactcagatgtac
agctacttcttgagggttcagtccatacagggggacaggaagtaccatgggagagctgaa
acagatacagactggagttcagagagcagggagatgattgttactctgggaaaactggct
tttaaccagctggagaaaggcaacctgatcttctacgaggcagacctggcagagtgtggc
atcgatattagagcagcctcagtgcactcaggagtgttcacccagatctttaaagaggag
tgtgggctgtaccaggacaaggtgttctgctttgtccatctgagcatccaggagtttctg
gctgccctttattacattctgtctttccttgacattggtgtcaagctgctctcagaaaaa
caacaaacctaccgggaacaggaactcctcctcctctaccagaaagttgtggacaaggtc
ttaaagagtgagaacggacacctggacttgttcctccgtttcctcctgggcctctctctg
gagaccaatcagaattatttacaaggtctgctgggaaagacagggagcggcccagtgttc
caacagggaatagtctcatacataaaggagaagataaatgaagatctctctccagagaga
agcatcaatctgttccattgtctgaatgagctgaacgaccgttctctagtggagcagatc
caactgtccctgacatcaggaagtctcttcaaaaaacgtgtctctcctgctcagtggtca
gctctggtcttcatcttgctgtcatcagaagaggagctggaaaagtttgacctgaagaaa
tactcagcttcagaggagggtcttctgaggctgctgccagtggtcaaagtctccaaaaca
tctctgttgaatgactgtcatctgtcagagagatgctgtgaagctctggcctcagttctc
agctccaactcctctagtctgagagagctggacctgagcaccaacgatctgcaggattca
ggagtgaagctgctctctgctggactggggagtccacactgtacactggaaactctcagg
ctgactggctgtcatctgtcagagagatgctgtgaagctctggcctcagttctcagctct
aactcctctagtctgagagagttggacctgagtaacaacgatctgaaggattcaggaatg
aagctgctctctgctggactggggagtccacactgtacactggaaacgctcagcttgtct
ggctgcgtggtcacacaggaaggctgtgcttctctggcctcagctctgagctccaacccc
tcccacctgagagggctggacctgagctacaatcacccaggagactctggagctgcgctg
ctctctgctggactggaggatccacgctggagactggacactctcagtgtggagcacggt
ggagtgtggaggctgaaaccagctctaaagaagtatgcctgtgacctcacactggacccc
aacacggcccacagacgactctctctgtctgaggacaacaggaaggtgacggatgttgaa
gaggaccagtcgtatccggatcacccagacagatttgactcccagctccaggtgttgggt
agagaggctctgactggccgctgttactgggaggtagagtgggaaggatgggttgagata
ggagtgacatacagaggaatcacaaggagaggacggggtggtgacagctggcttggacag
aacaacaagtcctggagtctttattgtcatgatggttgtgatgaagaggatccttactct
gcctgctacaacggtacagagacactcctccctctccacgccgctggctccaccagagta
ggagtgtatctggaccggcctgctggctctctgtccttctacagagtgtccccaggtgga
ggagggtcctcagacacactgacacacatccacaccttctggtcctcc
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