Gadus morhua (Atlantic cod): 115541536
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Entry
115541536 CDS
T10832
Symbol
rabgap1
Name
(RefSeq) rab GTPase-activating protein 1 isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115541536 (rabgap1)
Membrane trafficking [BR:
gmh04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115541536 (rabgap1)
Protein recycling
Other Rab GTPase associated proteins
115541536 (rabgap1)
Endosome - Golgi transport
Rab associated proteins
115541536 (rabgap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
UPF0242
PTB
Motif
Other DBs
NCBI-GeneID:
115541536
NCBI-ProteinID:
XP_030209126
Ensembl:
ENSGMOG00000016738
UniProt:
A0A8C5BG07
LinkDB
All DBs
Position
4:complement(15894885..15968818)
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AA seq
1137 aa
AA seq
DB search
MDDKGSVGKISLSSDSVSTLNSEDFVLVSRLGDDHTPSSSTNNGSDDEKPGLKVISEEGV
SFKIVGNGSEQQLQKELEDVLMEPSLAGVIAAAAAKPAPDQAGGVQSSGDRDQAIGDQAS
RDQDQDQAGPDQASRDQDQVGPDQASVDQAGGGERGLPMAVLPGMDPLSAPPSTVDLVLP
VQGSQESELNERSYRADESSPESGPGTPFPDEDSVVFSQLTYLGCASVNAPRSEVEALRM
MSILRGQCNLPLDVVLSVPGVSEGTVRLLDPVTSTEIANYPIYKILFCVRGHDGTTESDC
FAFTESHFNSEIFRIHVFRCQIPEAVSRILYSFATAFRRSAKKAMMSSQQAPPLTPEGDL
FTFTVSLEIREDDGKGTFSAVAKDKDKQSFKLRAGMDKKIVIYVQQTSNKELAIERCFGL
LLSPGKNVKNSDMHLLDLESMGKSSDGKSYIITGSWHPNTPQFQAVNEETPKDKFMYMTT
AVDLVITEVEEPVRFLLENRVRVCSPNDRLYWPFSKRSYTETFYLKLRQMERKERKSPAS
DTLYEVLSLESEAERERRKTTASPGALTTGPGGSSPPEDEEEEDNDEPLLSGSGDVSKEC
AEKILETWGDLLSKWHLNLSVRPRQLPALVRSGVPEALRGEVWQLLAGCHNNDHQVEEYR
TLITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSF
LAAVLLLHMPEEQAFSVLVKIMFDYGLRDLFKQNFEDLHCKFFQLERLMQEYLPDLYSHF
LNVGLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVALALLKTSKDDLIS
TDFEGALKFFRVPVPKRYRSEENAKKLMELACGMKISQKKLKKHEKEYHTIKEEQEQQEA
PIERYERENRRLQEANMRLEQENDDLAHELVSSKIALRKDLDNAEEKADALNKELLMTKQ
KLVDSEDEKRRLEEESAQLKEMCRRELDKSESEIKKNGSIIGEYKQICSQLSERLEKQQT
SNRGELDKIKARVDGCEKCSVLFNKEGRVRLATGPLGAMGPEESEEKEGLKNQLREMELE
LAQTKLQLVEAECKIQDLEHHLGLAMNEVQAAKKTWFNRTLSSIKTVTGTQGGKENT
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaggggtcggtggggaagatcagcctctcctcagactctgtgtccacgctc
aacagcgaggactttgtcctggtgtcccggctgggcgacgaccacacaccctcgtcgtcc
accaacaacggtagcgatgacgagaagcccggactgaaggtgatttctgaggaaggggtc
agctttaagatcgtgggtaacggcagtgagcagcagctccagaaggaactggaggatgtg
ctgatggagccgtcgctggccggggtcatcgccgcggcggcggcaaagcccgccccggac
caggccggaggggtccagtcctccggggaccgggaccaggccatcggggaccaggccagc
agggaccaggaccaggaccaggccggcccggaccaggccagcagggaccaggaccaggtc
ggcccggaccaggccagcgtggaccaggccggcgggggcgagcgagggctccccatggcc
gtgctccctgggatggatccgctcagtgcacccccgtccacggtggacttggtcttgccc
gtacaggggtcccaggagagcgagctcaacgagcggtcctacagggcggacgagtcgtcc
cccgagtccggccccgggacccccttcccagacgaggacagcgtggtgttcagtcagctg
acctacctgggctgcgcctcggtcaacgcgccccgcagcgaggtggaggccctgcgcatg
atgagcatcctgcggggccagtgcaacctgcccctggacgtggtgctgtccgtgccaggg
gtctccgagggcaccgtcaggttgctagaccccgtcaccagcacagagatcgccaactac
ccaatctacaagatcctgttctgcgtgcgtggccacgacggcaccacggagagcgactgc
ttcgccttcaccgagagccacttcaactctgagatcttcaggatccacgtcttccgctgc
cagatcccagaggcggtgagccggatactgtacagcttcgccaccgctttccgacggtca
gccaagaaggccatgatgtcatcgcagcaggccccgcccctcacacctgaaggggacctg
ttcaccttcacggtcagcctggagatcagggaggacgatggcaagggcaccttcagtgcc
gttgctaaggacaaagacaagcaaagcttcaagctgcgagccgggatggacaagaagata
gtgatctatgtccagcagacgtcaaacaaagagctggccatagaacggtgctttggccta
ctgctcagcccagggaagaacgtgaagaacagcgacatgcacctgctggacctggagtcc
atgggcaagagctcagacgggaagtcgtacatcatcacaggaagctggcaccccaacact
cctcaatttcaggccgtgaacgaagaaacgcctaaagataagttcatgtacatgacgacg
gcggtggacctggtgatcacggaggtggaggagcccgtccgcttcctgctggagaacagg
gtccgggtctgttcccccaacgaccgcctctactggcccttcagcaagcgcagctacacc
gagaccttctatctcaaactacgacagatggagcgcaaggagcgcaagagcccggccagc
gacacgctgtacgaggtgctcagcttggagagcgaggcagagcgggagcggaggaagacc
acggccagccccggggccctcaccacagggcccgggggttcctccccgcctgaggacgag
gaggaggaagataacgatgagccactgctcagcggctcaggagacgtttccaaagagtgc
gccgagaagatcctggagacctggggggacttgctctccaaatggcatctcaacctatcg
gtacgtcccagacagctgcctgcgctggtgcgcagcggcgttccagaggccctgcgagga
gaggtctggcagctcctggcgggttgccataacaacgaccaccaggtggaagagtaccga
accctcatcaccaaggagtctcctcaggacagtgccataacgagagacatcaacaggacg
ttcccggcccacgactacttcaaagacaccggtggagacggacaggactctctctacaag
atctgcaaggcctactctgtctatgacgaggagatcggatactgccagggacagtcattc
ctggctgctgtgttgctgcttcatatgccagaggagcaggccttcagtgttctggtgaag
atcatgtttgactacggcctccgggacctcttcaaacagaactttgaagatctccactgc
aaattcttccagctggagagactaatgcaggagtaccttccggacctgtacagccacttc
ctgaacgtgggtctggaggcccacatgtacgcctcccagtggttcctcaccctcttcacg
gccaagttcccgctctacatggtcttccacatcatcgacctgctgctctgtgagggcatc
agcgtgatctttaacgtggccctggcactgctcaagacatctaaggatgacctgatctcc
acggactttgaaggggccctcaagttcttccgggtccctgtgcccaagcggtaccgctcc
gaggagaacgccaagaagctgatggaactggcctgtggcatgaagatcagccagaagaag
ctgaagaagcatgagaaggagtaccataccatcaaggaggagcaggagcaacaggaggct
cccatcgagagatacgagcgagagaaccgccgtctccaggaggccaacatgcgtctggag
caggagaacgacgacctggcccacgagctggtcagcagcaagatcgccctgcgcaaggac
ctggacaacgccgaggagaaggctgatgccctcaacaaggagctgctgatgaccaaacag
aagctggtggactcggaggacgagaagaggcgactagaggaggagtcagcacagctgaag
gagatgtgcagacgggagctggacaagtccgagtctgagatcaagaagaacggctccatc
atcggggaatacaagcagatctgctcccagctcagcgagcgtctggagaagcagcagacc
tccaaccgcggagagctggataaaatcaaggccagggtggacggctgtgagaagtgcagc
gttctgttcaacaaggagggccgcgtgcgcctggccacggggcccctgggcgccatgggg
cccgaggagagcgaggagaaggagggcctgaagaaccagctgagggagatggagctggag
ctggcccagaccaagctgcagctggtggaggctgagtgcaagatacaggacctggagcac
cacctgggtctggccatgaatgaagtgcaggccgccaagaagacctggttcaaccgcacc
ctcagctccatcaagacggtgacgggcacccaggggggcaaggagaacacctaa
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