Gadus morhua (Atlantic cod): 115541610
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Entry
115541610 CDS
T10832
Name
(RefSeq) LOW QUALITY PROTEIN: paired box protein Pax-8-like
KO
K09293
paired box protein 8
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115541610
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
115541610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
HTH_Tnp_IS1
DUF6115
HTH_SB
Motif
Other DBs
NCBI-GeneID:
115541610
NCBI-ProteinID:
XP_030209295
Ensembl:
ENSGMOG00000011083
LinkDB
All DBs
Position
4:22560970..22574353
Genome browser
AA seq
460 aa
AA seq
DB search
MSSDPGRGHGGLNQLGGMFVNGRPLPEVIRQRIVDMAHQGVRPCDISRQLRVSHGCVSKI
LGRYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLTEGVCDGDT
VPSVSSINRIIRTKVQQPFNLPLDGKCLSPGRTLIPSSAVTPPESPQSDSLGSTYSISGL
LGIPPPSGEGKRSHDDSDQESCRHSVDSQGSGGVPRKQMRGDHFSSAHQHIDCSFDRHSY
HPDSFGSTASGKAEQTLYPLALLNGSLEEAKTGLSTSSATIGRNLTTHQGYAMVAEPFQP
IALCLKQEMSPEVTSTSSSPNMAASNRAFMELQALQSPVSVSCSSSNHFHHHTFNSFSNH
APMYGQFGSQSLISGRDMTNSTLPGYPPHIPSSGQTSYTSSAISGMVSGADYTTQTYSHS
PYASYSEAWRFTNSSILGTPYYYSSASRPTAPSTAAYDHL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgacccaggaagaggtcatgggggtcttaaccaactaggcgggatgtttgtg
aacggccggccgctcccggaggtgatccggcagcgcatcgtggacatggcccaccagggg
gtccgaccctgcgacatctcacgccagctcagagtcagccacggctgtgtcagcaagatc
cttggcaggtactatgagacaggtagtatcaaaccaggggtgatcggtggctctaagccc
aaggtggcaacgcccaaggtggtggagaagatcgccgactacaagcggcagaatcccact
atgttcgcctgggagatccgcgaccggctgctgaccgagggggtctgcgacggggacacg
gtgcccagtgtcagctccatcaacagaataatccgaacaaaagtccagcagcccttcaat
ctaccgttggatgggaaatgcctgagtcccggacgcacgctaattcccagttcggctgtc
accccaccagagtcgccccagtcagattctctgggctctacatactccatcagtggcctg
cttggaatccccccaccaagcggtgaagggaagagaagccatgatgacagcgaccaggag
agttgtcgtcacagcgtggattctcagggcagtggaggggtccccagaaagcagatgagg
ggggaccacttttcctccgcccaccagcacattgactgcagttttgatcggcatagctac
cacccagactcctttgggtccacggccagcggcaaggcggagcagacgttgtacccgctg
gcgctgctcaacggcagcctggaggaggccaagacgggcctctctacatccagtgcaacc
atcggccgaaatctgaccacacaccagggctatgccatggttgctgagccctttcagcca
atagcgctatgtctgaaacaggaaatgtccccggaagtgaccagcacaagctcctccccc
aatatggcagcttccaaccgggccttcatggagctgcaggcgctgcagagcccggtctct
gtcagctgcagcagctctaaccatttccaccaccataccttcaactcattctccaatcac
gcaccaatgtatggccaattcggcagccagtctctcatctcaggtcgtgacatgactaac
tccactttgccggggtatcctcctcacatcccgtcctcgggccagacgagctacacttcg
tcggcaatcagtggcatggtatcaggggcagactacactactcagacctacagccactcc
ccctatgcctcctacagtgaagcctggaggttcactaactccagcatactgggcacacct
tattactacagctcagcgtcccgcccgaccgcgccgtcgactgctgcttacgaccacctt
tag
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