Gadus morhua (Atlantic cod): 115541649
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Entry
115541649 CDS
T10832
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
115541649 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmh03036
]
115541649 (mbd4)
03400 DNA repair and recombination proteins [BR:
gmh03400
]
115541649 (mbd4)
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
115541649 (mbd4)
DNA repair and recombination proteins [BR:
gmh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
115541649 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
115541649
NCBI-ProteinID:
XP_030209341
Ensembl:
ENSGMOG00000013830
LinkDB
All DBs
Position
1:16766010..16768810
Genome browser
AA seq
509 aa
AA seq
DB search
MDHPMATCNSQLDSDTNREIINIQTDKDESSSHTLRMPTGWTRLVKQRKAGKTAGKMDVY
ITSSQGKTFRSKASLQAFLLKDGEGGLHADLFDFSTSQDGVRHTSLAVPVDKRQRRGKLA
TGAKKLEIKSESLTELSDLLPSKMDRKKSSPTRTEHQKAFASKQTLDVSPIIKEQIVEKA
EKVDIGTVKNMQVFSRGGRCDTMNAGECLTQSVSLTSLGDSQPESNLRGRLREKLFKPSA
ALTSQANTWQRPENTQPGPPPLAIIVTVDAAGQRVSEAEAEQGRYEEKIPVEEELKTLSE
FQCANRENENVKEEGSLSPDTPDECCSPARERQKSTTLGDKRKTSPYFSGKSRRDVLSPP
RRKAFKKWTPPRSPFYLVQETLFHNPWKLLVATIFLNKTSGKVAIPVLWQFFEHYPSAEI
TKDANWKSISELLKPLGLYEIRAKIIIRFSEEYLSKQWRYPIELHGIGKYGNDSYRIFCV
EEWRKVTPQDHKLNRYHAWLVENHKELGI
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggatcatccaatggctacatgcaatagtcagttggacagtgacacaaatagagaaatt
ataaatattcagacagacaaggatgaatcatcatcacatactttgagaatgcctactggc
tggacaagattagtgaaacaacggaaagcaggcaagacagcaggcaaaatggacgtctac
attacaagttcccaagggaagacattccggtccaaagcatctttgcaagctttccttctg
aaagatggagaaggaggtttacatgcagacctctttgattttagcacctctcaggatggg
gtgagacacacatctctggctgttcccgtggataagaggcagagaagaggaaagctggca
acaggtgccaaaaagctggaaattaaatcagaaagtttgactgaattgtcagatctgctt
ccaagtaaaatggacagaaagaaatcgtccccgaccagaactgaacatcaaaaagccttt
gcatccaagcagactttggacgtctcgcctataatcaaagagcagatcgtagaaaaggca
gagaaagttgacattggtactgtgaaaaacatgcaggtattttcaaggggagggcggtgt
gatactatgaacgccggggaatgtttaacgcagtctgtgtctttaacatcgttgggggat
tctcaaccggaaagtaacctaaggggtcggctgagggagaagctcttcaaaccgtctgct
gctctgacaagccaagcaaacacctggcagaggccggagaatacacagccaggccccccg
cctctggctatcattgtgactgttgatgcggccggccagagagtgagtgaagctgaggcc
gagcaaggaaggtatgaggaaaagattccagttgaagaagagctgaaaactctttctgag
ttccaatgtgctaatagggagaatgagaatgtcaaggaggaagggtccttgtcacctgac
acgcctgatgaatgctgttcaccagcaagagaacgccagaagtccacaaccttgggtgac
aaacgaaagaccagcccctatttcagcggtaaatcacgaagagacgttctcagcccacca
aggagaaaagctttcaagaagtggacccccccacgctccccattttacctggtgcaggaa
accctttttcacaacccctggaagctgctcgtggccaccatatttttaaacaagaccagt
ggaaaagtggccattccggttctttggcagttctttgagcattacccatctgctgaaata
actaaagatgcaaattggaagtctatttctgaacttctgaagccacttggattgtatgag
atcagagccaaaataataattcgcttttcagaggaatatctcagtaaacagtggcgctat
ccaattgaactacatggcataggaaaatacggcaacgattcctacaggatcttctgtgtg
gaagaatggagaaaggtcacccctcaagatcacaagctgaatagataccatgcctggctg
gttgaaaaccacaaggagctgggcatatga
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