Gadus morhua (Atlantic cod): 115541736
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Entry
115541736 CDS
T10832
Name
(RefSeq) LOW QUALITY PROTEIN: putative Polycomb group protein ASXL1
KO
K11471
additional sex combs-like protein
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115541736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmh03036
]
115541736
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
115541736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASXH
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
115541736
NCBI-ProteinID:
XP_030209447
LinkDB
All DBs
Position
1:22891711..22906620
Genome browser
AA seq
1543 aa
AA seq
DB search
MKDKQKRKKERTWAEAARMVLENFSDAPMTPKQILHVIQTKGLKEMRSGTAPLACLVTML
HSQVRGDRVKNSIFFKLPGRMSLFTLKKNALQWTKSPTEADTATDATGASSASTAHPTAS
STGPGTTTAAGSGPGLAHATAPEGAEQESCDSTETTANASGENDASVDESSSSASCSAEP
TPPSQPQTRLSRAAGQQSRAESQTQHATRLSRSRQSGRQRKKAVMMPRVVLTPLKVNGEH
VPSGAAGRRREASRGTGGPTLRARPDLGWKRPQHFKNMHGLHPGPMKRNRGGVDVDFETP
GSILVNTNIRALINVRTFSAFPAHSQQQLLQLLPEVDRQVGPDGMARLSSSALNNEFFTH
ASQSWKERLAEGEFTHEMQVRFRQEMEKEKKVEAWKEKFFEEYHGQKSGLTREESLKLTM
SEAAEVAGGVLDDEAATAAAAATGTPKRRSVGRRRRDGRMRRRTRADLRRRARRTLCKAA
TPTLQSPEPSEAGGALLDTSAASLNSPMSDGAAVQAEVVLQADSGLEVAPPAAECPPAEP
EPAGASAPAPVTDPAPVTPAAAAPEPEPEPEAEAEPEAAAALTPTQTPTPTPTPTPTPTP
TPTPTPTPSQSPASTSANEEPEAAASLLPEEAAPPLASTSSPSSSSSSSSSASSPASSPS
SPPSSSDRPGEVFAAGLDSSSSSSSSSSSSSSSSAVAAVDLLDDTASVVTSATGGTGTSS
RESSPSASPAPTHRPPSSSSSSSAAAAAAAQLKEQKRRPDEAQAFASFPEKRPRIDDRQS
FRTTIDGVRTEKPPPAAEEPKVPPIRIQLSRIKPPWVKGPPTYQICPRIVPAGEGSRRSG
TGGARTLADIKARAQQARAQREAAAVAATGAGAGPGGGGLRPPAGLPDRSSGRRTREHPG
PVEPGGGGGGGGGGGGGGGRRGGGGGLEEEPQPAADAHPPGAQLQPVERAERAAPRPSPS
PRPSPSPSATSTSTASESPQSPASASAPTPPRQRAAEEEEGGAPAPAAPPTAAATAGAVV
RVKTPPDGISEDGDTMSATEQDGGPEPPAKESPRSRPDRTAPPAATAVVMETLSQWSVSK
PLAPTSIPDSLPRFGAQGVDVIQSLAAAPSHWEQGGGGGSVIQHGSHHVGSPSSRARRGS
PSSSQRRGLMKRGQGEALEEEEEVEDDAAGGHSDSTETASDCENETHEEDQPLDWPRPLP
GQRNGLPVIRGPPPPPPXPPPPHQHAVIQARHGPTVIQPCYPNGLAPHPPSGRSQDPQPP
PPPSPSTSPPPRPRGRARGPPGLPGRGRQSGRQARPRPPRRGHKHFPGGPPEGGGGGGAG
RPARVQRGGQQPPGDAAAPGRPAAGEAAAPVPGRHPAGDQPHARRRRRPPAAAAAALQGS
VGGPDVRPGPGPTPRGAPEPVAEPGLLREGAVPVSSSRGRARHHLLLLALLPRPRPPELG
GGRVGRDPGAPQAQGHARTAPPPPRQQPRRPQRAPVPAGRPAPPPLALPQDELGPAPAAA
LPRPRADAALPGLRRQERGRGAALLPAAGPPQAPRPPPRPARA
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacaaacaaaagaggaagaaggagcgcacttgggcagaggcggctcgcatggta
ttggagaacttctctgatgccccaatgacaccaaaacaaatcctgcatgtcatccagaca
aagggtctaaaagaaatgaggagtgggacggctcctcttgcatgcctggtcaccatgcta
cactcccaggtgaggggagaccgagtcaagaacagcatcttcttcaagctgccgggacgc
atgagcctgttcactctcaagaagaacgccctgcagtggaccaagagccccacggaggca
gacaccgctacagacgccaccggggcctccagcgcctccaccgcccaccccacggcctcc
tccaccggccccggcaccaccaccgccgccggctccgggccgggcctggcccacgccacc
gcgcccgagggcgccgagcaggagagctgcgactccaccgagaccacggccaatgccagc
ggggagaacgatgcctcagtagacgagagctcctccagcgcctcgtgctccgccgagccc
acccccccaagccaaccacagacccgcctcagccgggcggccgggcagcagagccgcgca
gagtcccagacccaacacgccacccgcctcagccgctccagacagtcagggagacagaga
aagaaggcagtgatgatgccaagagtggtcctcactccgctgaaggtgaacggagagcac
gttccatcaggagctgccgggaggcgcagggaagcctctaggggtacgggggggcccacg
ctacgcgctcgcccagatctgggctggaagcgcccgcaacacttcaagaacatgcacggc
cttcacccaggacccatgaagaggaaccgaggaggcgtggacgtggactttgagacgccc
ggctcaatcctggtgaacaccaacatccgtgcgctcatcaacgtgcgcaccttctccgcc
ttccccgcacactcccagcagcagctcctgcagctgctccccgaggtggaccgccaggtg
ggtccagacggcatggcccgcctcagcagctcggccctcaacaatgagttcttcacccac
gcgtcacagagttggaaggagaggctggctgaaggggagttcacccacgagatgcaggtg
cgtttccgacaagagatggagaaggagaagaaggtggaggcctggaaggagaagttcttc
gaggagtaccacggtcaaaagtccggtctgacacgggaggagtcgctgaagctgacgatg
agcgaggcggccgaggtggcgggcggcgtgctggacgacgaggcggcaacggcggcggcg
gcggccaccggcacgcccaagagacgcagcgtggggcggcggcggcgggacggccgcatg
cggaggcgcacacgcgccgacctgcgccgccgggcgcgccgcacgctctgcaaggcggcc
acgcccaccctgcagtcccccgagccctcggaggcggggggcgccctgctggacacgtcg
gcggcgtcgctcaactcgcccatgtcggacggcgctgcggtgcaggccgaggtggtgctg
caggccgactcgggcctggaggtcgcccccccagccgccgagtgcccccccgccgagccg
gagcccgccggggcctctgcccccgcccccgtcaccgaccccgcccccgtcacccccgcc
gccgccgctcccgagcccgaacccgaaccggaggcagaggcagagcccgaagccgccgcc
gcgctcacgccgacgcagacccccacgcccacgcccacgccgacccccacgccgacgccc
acgcccacgcccactccgacccccagccagagccccgcctccaccagcgccaacgaggag
ccggaggcggcggccagcctgctccccgaggaggcggccccgcccctggcctccacctcc
tccccttcctcctcctcttcgtcgtcgtcctcggcctcctccccggcctcctccccctcg
tcccccccctcctcctccgaccggcccggggaggtgttcgccgcgggcctggactcttcc
tcctcctcctcctcctcgtcctcctcttcctcctcctccagcgccgtcgccgccgtggac
ctcctggacgacacggcctcagtggtcacctcggccacggggggcaccggcaccagcagc
cgcgagagcagcccctcagccagcccggcgcccacccaccgccccccctcctcctcctcc
tcctcctctgccgccgccgccgccgccgcccagctcaaggagcagaagaggcggccggac
gaggcccaggccttcgccagcttcccagaaaagcggccgcgcatcgacgaccgtcagtcc
tttcgtaccacaattgacggtgtccgcacggagaagcccccgccggcagcagaggagccc
aaggtcccgcccatcaggatacaactgtccagaatcaaaccgccctgggtcaaggggccc
cccacctaccagatctgcccccgcatcgtgccggccggcgaggggtcgcggcggtcgggg
acggggggcgcgcgcaccctggcggacatcaaggcccgagcccagcaggcccgcgcccag
cgggaagctgctgctgttgcagccactggcgccggggcagggccgggcgggggggggctg
cggcctcctgctgggctaccggatcgcagcagcggaagacgaacaagagagcaccccgga
cccgtcgagcccggaggaggaggaggaggaggaggaggaggaggaggaggaggtggaaga
aggggaggtggtggtgggctggaggaggaaccgcaaccggctgcggacgctcatccgcct
ggagcacaactacagcctgtagagcgggcggagcgcgccgcgccgcggccctcgccctcg
ccgcggccctcgccctcgccgtcggccacctccacctccacggcgtccgagtccccgcag
agccccgcctccgcctccgcccccaccccgccccggcagcgggcggctgaggaggaggag
gggggggcgccggcgccggcggcccccccgacggcagcggcgacggccggggcggtggtc
cgcgtcaagacgccccccgacgggatctccgaggacggggacaccatgtcggccacggag
caggacgggggaccggagccccccgccaaggagagcccccggtcccgcccggaccggacg
gccccccccgccgccaccgccgtcgtcatggagacgctgagccagtggagtgtgagcaaa
cccctggcccccacctccatcccggactccctgccccggttcggggcgcagggcgtggac
gtcatccagagcctcgcggcggccccctcccactgggagcaggggggaggaggggggagt
gtgatccagcacggctcacaccacgttgggtccccctcctccagagccagacgggggtcc
ccctcctcctcccagcgacggggcttgatgaagagagggcagggagaggcgttggaggaa
gaggaggaggtggaggacgacgccgccgggggccacagcgactccacggagacggcctcc
gactgtgagaacgagacccacgaggaggaccagccgctggactggccccgccccctccct
ggccagaggaacggcctgcctgtcatccgcgggccccccccccccccccccnncccccct
cctcctcaccaacacgccgtcatccaggcccgccacggccccaccgtcatccagccctgc
taccccaacggcctggccccccaccccccgtccggccgctcccaggacccgcagccgccc
ccccccccgagcccaagcacaagcccccccccgcggccacggggccgagcccgcggcccc
ccagggctccccggacgaggacggcagagcggccgccaagcccgcccccgccccccacgg
cgcggccacaaacacttccccggcgggcccccggagggcggcggcggcgggggggctggg
cggccggcccgtgtccagcgtggaggccaacaaccccctggtgacgcagctgctccaggg
cggcctgccgctggagaggctgctgcccccgtcccagggcgccacccggctggagatcag
ccgcatgccaggcgccgccgccgcccccccgccgccgccgccgccgccctccagggctcc
gtcgggggcccggacgtcaggcccggcccggggccaaccccccgcggagcccctgagccc
gtcgcagagcctgggctcctgcgggaaggagcagtacccgtctcctcctctaggggccgt
gcccgtcatcacctcctcctcctcgcgctcctccctcgaccacgccccccagaactcggc
ggcggccgagtcggccgtgatccgggagccccccaggcacagggccacgcccgaacggcc
ccacccccccctcgtcaacaaccacgccgcccccaacgggcccctgtccccgccggccga
ccagccccgccccccctcgccctccctcaagatgagctggggcccgcccccgccgcagcc
ctaccacgcccccgggccgacgcagctctccccggcctccggcgtcaagagcgaggccgg
ggcgcggccctcctgccagcagcaggccctccccaagccccccggccccccccccgcccg
gcccgggcctga
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