Gadus morhua (Atlantic cod): 115541788
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Entry
115541788 CDS
T10832
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Pattern recognition receptors [BR:
gmh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115541788
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Other DBs
NCBI-GeneID:
115541788
NCBI-ProteinID:
XP_030209487
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Position
4:complement(42442614..42459167)
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AA seq
1071 aa
AA seq
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RADSPAPSCVSMKSDHSMNIPVTFKQSVQHQTELEMNQEELADTLWGESAAVECQTKCMS
RLKKKLWSLDEGITQREQRPLNEIYTELFITERGSGEVNQEHEVRLIETASRKPAMKETP
IRCVDIFKPLPGQDKSDKPIRTIMTTGVAGIGKTVLTQKFTLDWAEGKANRDINFTFLLT
FRELNLLKNKMFSLVGLVHHFFIETKEAEICRFHRYQVVFILDGLDECRLPLDFQNNQIW
TDVTESTSVDVLLTNLIRGDLLPSARIWITTRPAAANRIPAECVDRVTEVRGFTDSQKEE
YFRKRFREETLANKIISHVNKSRSLHIMCHIPVFCWITATVLEDILKKSQIKEMPKNVSQ
MYSHFLRVQSIQGDRKYHGRSETDPHWSSESREIIVSLGKLAFNQLEKGNLIFYEEDLAD
CGIDIKAASVYSGVFTQIFKEEFGLYQARVFCFVHLSIQEFLAALYVFLSFIDTGINLLS
EKPPTSGKDKLLLLYQSAVDKALQSKNGHLDLFLRFLLGLSLEINQIVLRGLLGQTGTSS
LTNTETVSYIKEKIDGYLSPERSINLFHCLNELNDRSLVKEIQQYLASGRLSGESLSPAQ
LSALAFILLTSEEELDVFDLKKYSASEQGLLRLLPVVKVSKTSLLNGCRLSEECCEALAS
VLSSISSLRELDLSSNNLQDSGVKLLSAGLGSPHCTLETLRLNGCDLSERCCEALASVLS
SDSSSLRELELSTNDLQDSGVKLLSAGLGSPHCTLETLRLNGCHLSERCCEALASVLSSN
SSSLRELDLSTNDLQDSGVKLLSAGLGSPHCTLETLRLSGCLVTQEGCASLASALSSNPS
HLRELDLSYNHPGDSGAALLSAGLEDPRWRLDTLCVEHGGVWRLKPALKKYACELKLDPN
TAHRELSLSEDNRKVTWVGEHQSYPDHPERFDSQPQVLGREALTGRCYWEVEWKGQVEIG
VTYRGITRRGRGGDSLLGENNKYWVLYCTDGRYSARYNGRETALPLPPAGSTRVGVYLDR
PAGSLSFYRVSPGGGGFSDTLTHLHTFCSSFTQEDLLPGLWVWGRGSSVSV
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
agagcagactcccctgcacccagctgtgtctccatgaagagtgaccactctatgaatata
cctgttacctttaaacagtctgtacagcatcaaacagagctggagatgaaccaggaggaa
ctggccgacacactgtggggcgaatctgctgctgtcgagtgccaaactaaatgcatgtct
cgtttgaagaagaagttgtggagtttggatgagggaatcacacaacgggagcaaagacct
ctgaatgagatctacacagagctcttcatcacagagagaggcagtggagaggtcaaccag
gaacatgaggtcagactgattgaaacagcttccaggaaaccagccatgaaggaaacacca
atcagatgtgtggacatctttaaacccttacctggacaagataaatcagataaaccaatc
aggacaataatgacaactggagtggccggcattggtaaaaccgtcttaacacaaaagttc
actctggactgggctgaaggcaaagccaaccgtgacataaacttcacatttctcctcact
ttcagagagctgaatttactgaaaaataaaatgtttagcttggtgggacttgttcatcac
ttctttattgagaccaaagaagcagaaatctgcagattccaccggtaccaagttgtcttc
atcttagatggtctggatgagtgtcgacttcctctggacttccagaacaaccagatctgg
actgatgtcacagagtccacctcggtggacgtgctgctgacaaacctcatcaggggcgac
ctgcttccctccgctcgcatctggataaccacacgccctgcggcagccaatcggatccct
gctgagtgtgttgacagggtgacagaggtgagggggttcactgactcacagaaggaggag
tacttcaggaagagattcagagaggagacgctggccaacaaaatcatctcccacgtaaat
aaatcacgaagcctccacatcatgtgtcacatcccagtcttctgttggatcactgctaca
gttctggaggacatcttaaagaaatcccagataaaagagatgcccaagaacgtgagtcag
atgtacagccacttcctgagggttcagtccatacagggggacagaaagtaccatgggaga
tctgaaacagatccacactggagttcagagagcagggagatcatcgtttctttgggaaaa
ctggcttttaaccagctggagaaaggcaacctgatcttctacgaggaagacctggcagac
tgtggcatcgacatcaaagcagcctcagtgtactcaggagtgttcacccagatctttaaa
gaggagtttgggctgtaccaggccagggtgttctgctttgtccatctgagcatccaggag
tttctggctgctctttatgtctttctgtccttcatcgacactggtatcaatctgctctca
gaaaaaccacccacctctgggaaagataaactcctcctcctctatcagagtgctgtggac
aaggccttacagagtaagaacggacacctggacttgttcctccgcttcctcctgggcctc
tctctggagatcaatcagattgtcctacgaggtctgctgggacagacaggaactagctca
ctgaccaatacagaaacagtgtcttacatcaaggagaagatagatggatatctctctcca
gagagaagcatcaatctgttccactgtctgaatgagctgaacgaccgttctctagtgaag
gagatccaacagtacctggcatcaggaagactctccggagaatctctctctcctgctcaa
ctgtcagctctggccttcatcttactgacatcagaagaggagctggacgtgtttgacctg
aagaaatactctgcttcagaacagggtcttctgaggctgctgccagtggtcaaagtctcc
aaaacatctctgctcaatggctgtcgtctgtcagaggaatgctgtgaagctctggcctca
gttctcagctccatctctagtctgagagagctggacctgagttccaataatctacaggat
tcaggagtgaagctgctctctgctggactggggagtccacactgtacactggaaactctc
aggctcaatggctgtgatctgtcagagagatgctgtgaagctctggcctcagttctcagc
tcagactcctctagtctgagagagctggagctgagtaccaatgatctgcaggattcagga
gtgaagctgctctctgctggactggggagtccacactgtacactggaaactctcaggctc
aatggctgtcatctgtcagagagatgctgtgaagctctggcctcagttctcagctccaac
tcctctagtctgagagagctggacctgagtaccaatgatctgcaggattcaggagtgaag
ctgctctctgctggactggggagtccacactgtacactggaaactctcaggttgtctggc
tgcctggtcacacaggaaggctgtgcttctctggcctcagcactgagctccaacccctcc
catctgagagagctggacctgagctacaatcacccaggagactctggagctgcgctgctc
tctgctggactggaggatccacgctggagactggacactctctgtgtggagcacggtgga
gtgtggaggctgaaaccagctctaaagaagtatgcctgtgaactcaaactggaccccaac
acggcccacagagaactctctctgtctgaggacaacaggaaggtgacgtgggttggagag
caccagtcgtatccggatcacccagagagatttgactcccagccccaggtgttgggtaga
gaggctctgactggccgctgttactgggaggtagagtggaaaggacaggttgagatagga
gtgacatacagaggaatcacaaggagaggacggggtggtgacagcctgcttggagagaac
aacaagtactgggttctttattgtactgatggtcgttactctgcccggtacaacggtaga
gagacagccctccccctcccccccgctggctccaccagagtaggagtgtatctggaccgg
cctgctggctctctgtccttctacagagtgtccccaggtggaggagggttctcagacaca
ctgacacacctccacaccttctgctcctccttcacccaggaggacctcctcccggggctc
tgggtatgggggcgggggagcagcgtctctgtgtaa
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