KEGG   Gadus morhua (Atlantic cod): 115541792
Entry
115541792         CDS       T10832                                 
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 4-like
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    115541792
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gmh03036]
    115541792
Enzymes [BR:gmh01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     115541792
Chromosome and associated proteins [BR:gmh03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     115541792
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln fn1
Other DBs
NCBI-GeneID: 115541792
NCBI-ProteinID: XP_030209492
Ensembl: ENSGMOG00000012763
LinkDB
Position
4:complement(27413681..27579127)
AA seq 1096 aa
MTSHTHHSEGLMATEHQPLDALKTSALNHIPTVDINSALPLRLPPAAIPMDLRVDQQHHH
HQHHPHQQLSPMSPLGQQGPLGPGAPSGGSSPGREQQLQQELLTLKQKQQIQRQILIAEF
QRQHEQLSRQHEAQLQEHIKQQQELLALKHQQELLEHQRKMESHRMEQEMEKQQREQKLL
LLKNKERGQESAVASTEVKMRLQEFVLNKKKALAQRSINQGGIPNDAPYWYRKTQHSSLD
QSSPPQTGLSPYNHPVLGVYNPRDDFPLRKTASEPNLKLRSRLKQKVSERRSSPLLRRRD
SPITAAKKRSLDMADSVCSSAPGSGPSSPNNNSSSNIPNENGIAVCSSAEVSLAQRLSSS
SADGGSLSQLSLYCSPSLPNITLGLPATSTPSPAANVTSSPQDGGGLQPALSLSPPFLSG
AHLTPYMTETGSGAHSPLLQHMVLMEQGPPQSPLLTGLSIPSAAASMSKLQRQHRPLGRT
QSAPLPQGSGAPSNHAPSHAQVLALQQLVVQQQHQQFLEKHKQQFQHQQLHLNKMMGKPC
EAGVVRQHQSHPEETEEELREQQDTEGGALPAGVSVKQEPPDPQELLEEGPWDMERQSDH
ELLFRQQALLLEQQRIHQLRNYQASMEAAGLSITFPGHRPLSRAQSSPASAPSFPLSVAP
PDPPAKTHFTTGLVYDSLMQKHQCMCGNTNSHPEHAGRIQSIWSRLQETGLRAQCECIRG
RKATLEELQTVHSEAHVLLYGTNPLRQKIDCSVTPMFVRLPCGGVGVDSDTIWNEVHSSS
AARLAVGSVVELVLKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAARLLQQRL
SVNRILIVDWDVHHGNGTQQAFYDDPNVLYLSIHRYDDGNFFPGSGAPDEVGSGAGVGFN
VNVAFTGGLDPPMGDAEYLAAFRTVVMPIASEFSPDVVLISSGFDAVEGHPPPLGGYMLT
SKCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVAALLGQELDPLPKAVLEQRP
NPNAVRSLGKVIEVHSKYWRAVQRSATRLGLSLLEAKRGDSEEAETVHAMASLSVANSNA
MEHRQQEEPMEEGEPL
NT seq 3291 nt   +upstreamnt  +downstreamnt
atgacttctcacactcatcattcagagggcctcatggccacggagcaccagcctctggac
gccctgaagacctccgcactcaaccacatccctacagtggacatcaactccgcccttccg
ctgcgtctccctccggctgccatccccatggacctccgggtggaccaacagcaccaccac
caccaacaccatccacaccagcagctgtctcccatgtcccccctgggccagcagggcccc
ctgggccccggggccccgagcgggggctccagccccgggcgggagcagcagctgcagcag
gagctgctgaccctgaagcagaagcagcagatccagaggcagatcctcatcgccgagttc
cagcggcagcacgagcagctgtcccgccagcacgaggcccagctccaggagcacatcaag
cagcagcaggagctgctggccttgaagcaccagcaggagctgcttgagcaccagaggaag
atggagagccaccggatggagcaggagatggagaagcagcagcgggagcagaagctgctg
ctgctgaagaacaaggagcggggacaagagagtgcggtggcaagcacagaggtgaagatg
cgtctgcaggagttcgtcctgaacaagaagaaagcactggcccagcgcagcatcaaccag
ggaggaatccccaacgacgccccctactggtaccggaaaacccagcacagttctctggat
cagagctcgcccccccagacgggcctgtccccatacaaccaccccgtcctgggggtgtac
aacccccgagacgacttccccctgcgcaagaccgcgtcggagcccaacctgaagctgcgc
tccaggctgaagcagaaggtgagtgagaggcggagcagcccactcctacggcgccgcgac
agccccatcaccgccgccaagaaacgctcgctggatatggcagactctgtttgtagcagt
gctcccggctctggccccagctccccgaacaacaacagctcctctaatatccccaacgag
aacggcatcgctgtgtgctccagcgccgaggtgtccttggcccagcggctgagcagcagc
agtgcggacgggggctccctcagccagctgtccctatactgctccccctccctgcctaac
atcaccctgggcctgcccgccacctccacgcccagccctgccgccaacgtgacctcgtct
ccgcaggacggtggtggtctgcagccggcgctgtccctgagcccccccttcctgtccggt
gcccacctgaccccctacatgacggagaccggctccggggcccacagtcccctgctgcag
cacatggtcctaatggagcagggtcccccccagagccccctgctgacaggactctccatc
ccgtcggcggcagcctcgatgtctaagctccagcggcagcaccggcccctggggcggacc
cagtcggcgcccctgccccagggcagcggggccccttccaaccacgcccccagccacgcc
caggtgctggccctgcagcagctggtggtgcaacagcagcaccagcagttcctggagaaa
cataagcagcaattccagcaccagcaactccacctcaacaagatgatgggtaagccgtgc
gaggcgggcgtggtccggcagcaccagagccacccagaggagacggaggaggagctgagg
gagcagcaggacaccgaggggggagccctccccgccggggtcagcgtcaaacaggagccc
cccgacccccaggagctcttggaggaggggccctgggacatggagaggcagtcggaccat
gagctgctcttcagacagcaggccctcctattggagcagcagaggattcaccagctgagg
aactaccaggcgtccatggaggctgccggcctgtcaatcaccttccccgggcaccgcccc
ctctcccgcgcccaatcatctcctgcctccgccccctccttccccctcagtgtcgcgccc
cccgacccgcccgccaaaactcacttcactacaggcctggtgtacgactccctgatgcag
aagcaccaatgcatgtgtgggaacaccaacagccacccggagcacgccgggcgcatccag
agcatctggtcgcgactgcaggagacggggctgcgggcgcagtgtgagtgcatcaggggg
aggaaggcgactctggaggagctgcagacagtccactcagaggcccacgtcctgctgtac
ggaaccaaccccctgagacagaagatagactgctctgtcacgcccatgttcgtcaggctg
ccctgcggaggagtgggggtggacagtgacaccatatggaatgaggtgcactcatccagc
gcggcacggctagcggtcggctctgtggtggaactggtgctgaaggtggccaccggggag
ctgaagaacggcttcgccgttgtccgacctcccggacatcacgccgaggagagcactccc
atgggattctgttatttcaactcagtggcgatcgctgcaaggctgctgcagcagcgactc
agcgtcaacagaatcctcatcgtggactgggacgttcaccatggcaacggcacccagcag
gcattctacgacgaccccaacgtcctctacctgtccatccatcgctatgacgacgggaac
ttcttccccggcagcggagcacccgatgaggtgggcagtggtgcaggggtgggtttcaac
gtcaacgtagcatttaccgggggtctggacccccccatgggagacgcagagtacctggct
gccttcaggacggtggtgatgcccatcgccagtgagttctcccccgatgtggtgctcatc
tcgtcgggcttcgacgctgtggagggacatccccctccgctggggggctacatgctcacc
tccaaatgtttcggtcacctgacccgtcagctgatgaccctcgccggggggagggtggtt
ctggcgttggaggggggtcacgacctcaccgcaatctgtgacgcttcggaggcttgtgtg
gctgccctgctgggccaggagctggatccgctgcccaaggcggtcctggagcagcggccc
aaccccaacgccgtccgatccctggggaaggtcatcgaggtgcacagtaagtactggcgt
gctgtgcagcggtctgcaaccaggctgggtctctccctgctggaggccaagcgaggcgac
tcggaggaggcagagaccgtccacgccatggcctcgctctctgttgccaatagcaacgct
atggagcacaggcaacaggaggaaccaatggaagagggggaaccactgtag

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