Gadus morhua (Atlantic cod): 115541872
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Entry
115541872 CDS
T10832
Symbol
strbp
Name
(RefSeq) spermatid perinuclear RNA-binding protein isoform X1
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmh03041
]
115541872 (strbp)
Spliceosome [BR:
gmh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115541872 (strbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
115541872
NCBI-ProteinID:
XP_030209626
Ensembl:
ENSGMOG00000004870
LinkDB
All DBs
Position
4:15812849..15884573
Genome browser
AA seq
787 aa
AA seq
DB search
MRSFRSFGNDDRHVMAKHSTIYPSSHDLEAVQSLVSTVECALKQVSDWLDRSNSNGVGTV
TAISPAEPGAKQDKDPGDKDQGDKDTGDEHGEKPADEEEEDADGYREPGGGGSLCGVLRI
GLVAKGLLIKDDMDLELVLMCKDKPTETLLDTVCQNLPTQIQTLSDGKYEITSSLPEAAI
LVKTTTEPKLTLKITLTSPAMRDEEDEEEEEEEEEGEEEEQEEEQQEQQKQQQEKEPEEK
VVKQEGVELEENQEEDVRVLSAAAQRVKAEEEKQEEGESLDRHTCLLALAALRHAKWFQA
RVNGLKSCVIVLRILRDMCNRHAVWAPLRGWPLELICEKAIATCNRPLGAGEALRRVMEC
LASGILLPGGPGLHDPCEKEPADALAHMTDQQAQAVTHSAQHALRLMAFGQIYKVLEMDP
LPSSKPSQKYPWSDKEGSGLKRPYEDGAMEDRDLIKKMKRNLRKVLDSKAVESNQPMNAL
MRLNQIRPGLQYRLLSQSGPVHAPLFTMSVDLDGTVHQAAGSSKKTAKLHVAVKVLQAMG
YPTGFDSDLDPMSSDERSDGEGKSETTANAGSQPTHSSDSSNTLEVRTQGPILTASGKNP
VMELNEKRRGLKYELISESGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAALAALEKL
FSGPNAAANKKKKPLPQQTKGALAAASAVAAQVARGRGRTALARGAFVSAAAAPGYVTPG
SPPVWTASGWNPNARSLHSFGAPYGYTPAAAAAPAYGGLFIDNPFYQPRTLAPFIIHLGP
QDLFSDF
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccttccgttccttcggcaacgacgaccgccatgtcatggcaaagcactccacc
atctacccgtcctcgcatgacctggaagccgtccaatcgctggtctctaccgtggagtgc
gccctcaagcaggtctccgattggctggaccggagcaacagtaacggtgtcggcaccgtg
acggcgatcagcccggccgagcccggcgccaagcaggataaggacccaggggacaaggac
caaggggacaaggacacaggggacgagcacggggaaaagcccgcagacgaggaggaggaa
gacgcagacggatacagggagcccggaggaggcgggtctctgtgtggagtgctgcggatc
ggcctggtggccaagggcctgctcatcaaggacgacatggacctggagctggtcctcatg
tgtaaagacaagcccaccgagacgctgctggacacggtctgtcagaacctgcccacacag
atacagacgctgtcggacggcaagtacgagatcaccagctccctccccgaggcggccatt
ctggtgaagaccacgacggagcccaagctcaccctgaagatcacgctcacctcccccgcc
atgagggacgaggaggacgaggaggaggaggaggaggaggaggaaggagaggaggaagaa
caggaggaggagcagcaggaacaacagaaacaacagcaggagaaggagccggaggagaag
gtcgtgaagcaggagggagtcgagctggaggagaaccaggaggaggacgtgcgagtgttg
agcgctgcagcgcagagagtgaaggctgaggaggagaaacaggaggagggggagtctctg
gacaggcacacatgtctgttggccctggcagccctgcgacacgccaagtggttccaggcc
agggtgaacggactcaagtcgtgcgtcatcgtgctccggatcctgcgggacatgtgcaac
agacacgccgtctgggcgccgctcagaggatggcccctggagctcatctgtgagaaggct
atcgccacctgcaacagacctctgggagcgggcgaggccctgcgcagagtgatggagtgt
ctggcctctggcatcttactaccaggcggtcctggactacacgacccgtgtgagaaggag
cccgccgatgccctggcccacatgacggaccagcaggcccaggccgttacacacagcgcc
cagcatgcgctgagactcatggccttcggacagatctacaaagtgttggagatggacccc
cttccctcaagtaaaccatcccagaaatacccttggtctgacaaagaaggttccggtctg
aagcggccgtacgaggatggtgcgatggaagacagagacctgatcaagaagatgaagagg
aacctgaggaaagtcctggacagcaaggccgtagagtccaaccagcccatgaacgccctg
atgcgtctgaaccagatccggccggggctgcagtaccgcctgctgtcccagtcgggcccg
gtccacgcgccgctcttcaccatgtcggtggacctggacggcaccgtgcaccaggccgca
ggctcctccaagaagaccgccaagctgcacgtcgccgtcaaggtgctgcaggccatgggc
taccccacgggcttcgactcggacctcgaccccatgagttcggacgagaggtcggacggc
gagggcaagagcgagacgacggccaacgccggcagccaaccgacgcactcctcggacagc
tccaacacgctggaggtgaggacacagggccccatcctgacggccagcgggaagaacccc
gtgatggagctgaacgagaagagacgcggcctgaagtacgagctcatctcagagagcggg
ggcagccacgacaagcgctttgtgatggaggtggaggtggatggacagaagttccgcggg
gcggggcccaacaagaaagtggctaaggcgagcgctgccttggccgccctggagaagctc
ttctccggtcccaacgccgccgcgaacaagaagaaaaagcccctacctcagcagaccaaa
ggagcgctggcggcggcctcggcggtcgcggcccaggtggcgcggggccgagggaggacg
gcgctggcgaggggggccttcgtcagcgccgccgccgcgcccggatacgtcacgccaggt
agtccgcccgtctggacggcctcgggctggaaccccaatgcccgcagtctacacagcttt
ggcgcgccgtacggctacactcctgctgctgctgcagctcccgcctatggtggtcttttc
atcgacaaccccttctaccagccgcggaccctcgcccccttcatcatccacctgggaccc
caggacctcttctctgacttctag
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