KEGG   Gadus morhua (Atlantic cod): 115541972
Entry
115541972         CDS       T10832                                 
Symbol
helq
Name
(RefSeq) helicase POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
gmh  Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gmh03400]
    115541972 (helq)
Enzymes [BR:gmh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     115541972 (helq)
DNA repair and recombination proteins [BR:gmh03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    115541972 (helq)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF7898 DNA_pol_lambd_f DUF4332
Other DBs
NCBI-GeneID: 115541972
NCBI-ProteinID: XP_030209824
Ensembl: ENSGMOG00000000020
UniProt: A0A8C5AIG4
LinkDB
Position
4:complement(9290973..9301990)
AA seq 1044 aa
MDSLCIKALAMNAEQQQQLKVKRVSTRKRPRDSLRSQMTPARKKGTGRDKGILNGSMDDQ
IPTEFCSDNEDLFGDYDSILGDSSLMAKLDSVEQTARTKDPPQAVDSKPVDNKPVDQPKR
GFTELRSLKNTDLQRPSDDHLTDSILDVFKDESFGDLPSAQQLDIEEKDLRTSDILQKDK
TSTPLRTKERTSECRTKMGGTNTTEGQTSAGFSKARRSMTDHLKRAMLSNAGAPSNVSRT
KVLKEAVVSEEINVAMQAMEKVSTVTTDLGPFFGLPTKVKELIHKLRGINDLYDWQKTCL
NLDCVRERRNLIYSLPTSGGKTLVAEVLILKELLCRKKDCLFILPYISLVQEKVRGLAGF
GLELDFMVEEYAGSKGRFPPVKRRNKNSLYIATIEKGHSLVNSLIENDRLDNLGMVVVDE
LHMLGDGSRGAIIEMTLAKVLYMSKTTQIIGMSATLGNIKDIQKFLRAENYTNDFRPVQL
SEYVKLSNTIYEVAPKEEDCFKFSRLLNFKYSSSMQQRDPDHIIALVTEVIPAYSCLVFC
PTQKNCENVAGMICKYLKEEFLVLKEKEKGVLLRELKASGSGMVCPVLRKVIPYGLAYHH
GGLTGAERRLVEDAYSSGVLCLLACTSTLAAGINLPARRVILRSPYVAADFLKRSQYKQM
VGRAGRAGIDTVGESILILQDKDTVLAKKLVSAPMETCYSNLTHNEGKGVLSLILSIIGL
KMTTTPEQVKDFMSSTLLCVQQERLCAERGLTDRVQDSLVLLQEMNLISVTQGPQGDALE
ITTLGRATYKSSVDLTKCDVLYKDLSKGLESLMLNSHLHLLYLVTPYDMIAQCKPDWMAF
FRQFSLLSASEQKMSATVGVPESFVARKAAGQTVKKSVNMASVHRLYLALVLYTLLKETN
LWSVAERFSLSRGFIQSLLSSSAAFCACVQHFTEEFEEFWPFKSLLAELSKRLSYCVTAE
LVPLMEVAGVLEYRAKQLFNAGYKTLSHLANADPSTLSNAVENLNKKQATMMVASAKMLL
NDKASALQEEVDELLMLPLDLPVP
NT seq 3135 nt   +upstreamnt  +downstreamnt
atggatagtttatgtatcaaggcattagcaatgaatgctgagcaacaacaacagctaaaa
gtcaaaagggtgtcgacgagaaagaggccaagagacagtcttagaagccaaatgacacct
gccaggaaaaagggaactggtagagacaaggggatactaaacggctcaatggacgatcaa
attcctactgagttttgcagtgacaatgaagacttatttggggattatgacagtattttg
ggggacagctctctcatggctaaacttgacagcgtggaacaaacagcaagaacaaaagac
cctccccaggctgtagacagcaaaccagtggacaacaaaccagtggaccagccaaagaga
ggattcacagagctgcgttctttgaaaaacacagatttacagcggcccagcgatgaccac
ctcaccgactccatcctagacgtcttcaaagacgagtcctttggggacctaccatcagcc
caacagcttgacattgaagaaaaagatctgaggactagcgatattttacaaaaagacaaa
acatctacacctttgaggaccaaggagaggaccagtgaatgcagaactaagatggggggt
acaaatacaacagaaggacagacttctgccgggttttctaaagccaggcgcagtatgaca
gatcacctgaagagggcgatgttgagtaacgccggggctccatccaatgtctcacgtaca
aaggtgctgaaggaggctgtggtctctgaggaaatcaatgttgccatgcaggccatggaa
aaggtatccacggtgaccacggacctcggacccttctttggtcttcccaccaaagtgaag
gaactgatacacaaactgcgaggaataaacgacttatatgactggcagaagacgtgtttg
aaccttgactgtgttcgtgagagaaggaacctgatctactcactgcctaccagcggaggg
aagactcttgttgctgaggtcctcatcctgaaggagctgctgtgcaggaagaaggactgc
ctgttcatcttaccctatatatcactggtgcaagagaaggtgcgtgggttagcaggcttt
ggcctggagctggacttcatggtggaggagtacgctggcagcaagggacggttcccccca
gtgaagcggcggaacaagaattctctctacatcgctaccatagagaagggccacagcctg
gtcaactctctgatagagaacgacaggctggacaacctgggcatggtggtcgtggatgag
cttcacatgttgggagatggcagcagaggtgccatcattgagatgaccctggctaaagtc
ttatatatgagtaaaacaacccagattattgggatgagcgccaccctggggaatattaaa
gacattcagaagtttttgagagcggagaattacaccaatgacttcaggcctgtccagctg
agtgagtacgttaagctgagcaacaccatctacgaggtggcccccaaagaagaggactgt
tttaagttctcccgtcttcttaactttaagtattccagcagcatgcagcagagggaccca
gaccacatcatcgccttggtaacggaggtcattcccgcctactcttgcctcgtcttctgt
cctacccagaagaactgtgaaaatgtagcagggatgatctgcaaatatctgaaagaggag
ttcctggtgctgaaggagaaggagaagggcgtgctgctgcgggagctgaaggccagcggg
agcggcatggtgtgccccgtgctccggaaggtcatcccctatggcctggcctaccaccac
ggcgggctgacgggggccgagcgccggctggtggaggacgcctactccagcggggtgctc
tgcctgctggcctgcacctccaccctggccgccggcatcaacctgcccgcccgcagagtg
atcctgcgctctccctacgtggcggcagacttcctcaagaggagccagtacaagcagatg
gtgggccgcgctgggcgggccggcatcgacaccgtgggggagagcatcctcattctacag
gacaaggacactgtcctggctaaaaagcttgtctctgccccgatggaaacctgctacagc
aacctcacacacaacgaaggcaagggtgtcctaagtctcatcctgtcaatcattggacta
aagatgaccaccaccccggagcaggtgaaggacttcatgtcgagcaccctgctgtgcgtc
cagcaggagcggctgtgtgccgagcgaggcctgacggaccgggttcaggacagcctggtt
ctcctccaggagatgaacctcatcagcgtgacccagggcccccagggggacgccttggag
atcaccacgctgggccgggccacgtacaagagctcggtggacctgaccaagtgtgacgtg
ctctacaaggacctgtccaaaggcctggagagcctgatgctcaacagtcacctgcacctc
ctctacctggtcacgccctatgacatgatcgcccagtgcaagcccgactggatggccttc
ttcagacagttcagcctgttgtctgcttcagagcagaagatgtccgcaacggtcggggtg
cctgagagttttgtggccaggaaggccgccgggcagacggtgaaaaagagcgtgaacatg
gcgtcggtgcaccggctgtacctggccctggtgctctacaccctgctgaaggagaccaac
ctgtggagcgtggccgagcgcttctcgctgagccgcggcttcatccagagcctgctcagc
tcctccgcggccttctgcgcctgcgtgcagcacttcaccgaggagtttgaggagttctgg
ccgttcaagtccctgctggccgagctgtccaagcgtctgagctactgcgtcacagccgag
ctggtcccgctgatggaggtggctggggtcctggagtacagggcgaagcagctgttcaac
gcgggctacaagacgctgtctcacctggccaacgccgaccccagcaccctctccaacgcc
gtggagaacctgaacaagaagcaggccactatgatggtggcctccgccaagatgctgttg
aacgacaaggcttctgctctgcaggaggaggtggacgagctgctgatgctgcctctggat
ttacccgtgccgtga

DBGET integrated database retrieval system