Gadus morhua (Atlantic cod): 115542045
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Entry
115542045 CDS
T10832
Symbol
sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04210
Apoptosis
gmh04820
Cytoskeleton in muscle cells
Brite
Cytoskeleton proteins [BR:
gmh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115542045 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
115542045 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115542045
NCBI-ProteinID:
XP_030209954
Ensembl:
ENSGMOG00000008663
LinkDB
All DBs
Position
4:11314078..11357858
Genome browser
AA seq
2486 aa
AA seq
DB search
MLQTPNKMDTSGAKVLETADDIQERRQQVLDRYRRFKELSMVRRQKLEDSYRFQFFRRDA
DELEKWIQEKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANAGAIIKLDETGNLMITEG
HFASETIRTRLEELHRLWDLLLLKTKEKGMRLLQAQKLVQYLRECDDAMDWINDKETMAT
SEELGQDLEHVELLQKKFEEFQTDLAAHEERVNEVNQLAARLTQEAHPEAELIVRKQDEV
NAAWQRLKGLALQRQGRLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQAL
LRKHEGLERDLAALEDKVNMLGGESERLQQTHPQNAAQIHLKKDELVTNWEQIRTLAAER
RARLNDSYRLQRFTADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAH
EDSFRAADEAGQALLNTGHYASDEVKEKLGVLTEEKESLLELWELRRQQYEQCMDLQLFY
RDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKL
IDNNHYAKEDVATRRDALLNRRNALHERAQSRRAGLEDSFHLQQFFRDSDELKSWINEKM
KTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELLDGKHYAADEVSGRM
EEVSSQWKKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGQLASDDYGKDLTSV
QNLQKKHALLEADVAAHQDRIDGITIQARQFQEAGHFDADNIRKKQEALVTRYDGLREPM
TARKQKLSDSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEI
SGHEPRIKAVSQKGDAMVEEGHFAAEEVKVKLGELNGRWDTLKGKAAQRRQDLEDSLQAQ
QYFADANEAESWMREKEPIVGSPDYGKDEDSAEALLKKHEALMSDLSAYGSSIHALKEQA
QSCRQQVAPTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQ
GFVPAAYVKKLDPTQSSSRENLLDEQGSIALRQEQADNQLVAKEACSVSVRMKQVEELYG
TLLELGDKRKDMLEKSCKKFMLFREANELQQWINEKEGALTNEEMGSDLEQVEVLQKKFD
DFQKDLKANESRLRDINKVASELESEGLMAEEAPMVQSQQQEMLGSAPGKDEADAKNASP
WKNVRMAVQTTANFNTIKELNNRWRSLQQLAEDRSNMLGSAHEVQRFHRDADETKEWIEE
KNQALNTDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPEAVDDIQ
EKCTELNTAWSSLVGRADQRKDKLGNSHDLQRFLSDFRDLTSWINGIRGLVSSEELAKDV
TGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLARGHYASPEIQQKLEALDSERAGLE
KAWVQRRMMLDQCLELQLFNRDCEQAENWMAAREAFLASDDKGDSLDSVEALIKKHEDFD
KAITVQEEKIAALQSFADQLIGADHYAKPEIFNRRTEVLDRWLRLKTQMIEKRSKLGESQ
TLQQFSRDVDEIEAWISEKLQTATDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRI
RGVIDTGNALIQRGACSGSEDAVKVRLNALDEQWQFLVNKSAEKSQKLKEANKQQNFNTG
IKDFDFWLSEVDALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLMG
SIAFDTTVVKDKRDAVNGRFAKIKSMAAGRRAKLNESHRLHQFFRDLDDEESWIKEKKLL
VSSEDYGRDLTGVQNLRKKHKRLEAELGAHEPAIQSVLETGKKLSDDNTIGQEEIQQRLA
QFVDHWKELKDLSGARGQRLEESLEYQQFVANVEEEEAWINEKLNLVGSEDYGDTLAAVQ
GLLKKHEAFETDFTVHRDRVNDVCTNGDELIKKNNHHVDNISAKMAALRGKVSELERAAA
QRKAKLDENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQ
AFQQEGITNITALMDQLLAAQHVQSKAIETRHAALIKRWNQLLSNSAARKKKLLEAQQHF
RKVEDLFLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIRALREAHDAFRSSLSSAQAD
FGQLAELDQQIKSYQVVSNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKL
RQEFAQHANTFHQWLQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIE
DLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALK
EFSMMFKHFDKEKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFESILDTVDPNRDGNV
SLQEYMAFMISRETENVKSSEEIESAFRALSTEAKPYVTKEELYQNLTKEQADYCMSHMK
PYLDGKGRELPSAFDFVEFTRSLFVN
NT seq
7461 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaactcccaataaaatggacaccagcggggctaaggtgctggagacggcggat
gacatccaggagcgccggcagcaggtgctggaccggtaccggcgcttcaaggagctgtcc
atggtgcggcggcagaagctggaggactcgtaccgcttccagttcttccgccgggacgcc
gacgagctggagaagtggatccaggagaagctgcagatcgcctccgatgagaactacaag
gacccctccaacctgcagggcaagctccagaaacaccaggcgtttgaggctgaggtacag
gccaacgctggagccatcatcaagctggacgaaaccggcaacctcatgatcaccgagggc
cacttcgcctcagagaccatccgcacccgtttggaggagctgcaccgcctgtgggacctg
ctgctgttgaagaccaaggagaagggcatgcgtctgctgcaggcccagaagctggtgcag
tacctgcgcgagtgtgacgacgccatggactggatcaatgacaaggagaccatggccacc
tcggaggagctgggccaggacctagagcacgtggagctgctgcagaagaagttcgaggag
ttccagacggacctggcggcccacgaggagcgcgtcaacgaggtcaaccagctggcggcc
cggctcacccaagaggcccacccggaggcggagctcatcgtgcgcaagcaggacgaggtc
aacgctgcgtggcagcggctgaaggggctggcgctgcagcggcagggccggctcttcggg
gcggccgaggtgcagcgcttcaaccgggatgtggacgagaccatcagctggatcaaggag
aaggagcagctcatggcctccgacgactttggccgtgacctggccagcgttcaggccctg
ctgcgtaagcacgagggcctggagagagacctggctgccctagaggacaaggtgaacatg
ctgggcggcgagtcggagcgcctgcagcagacccacccccagaacgcggcccagatccac
ctgaagaaggacgagctggtcaccaactgggagcagatcaggaccctggcggccgagaga
cgcgcccgcctcaacgactcctaccggctgcagcgcttcacggctgacttcagggacctg
accagctgggtgacggagatgaaggcgctgatcaacgctgacgagctggccaacgacgtg
gccggagccgaggccctgctagaccgccaccaggagcacaagggagagattgacgcccac
gaggacagcttcagggctgccgacgaggccggccaggcgctgctcaacacaggccactac
gcctcggacgaggtcaaggagaagctgggcgtcctcaccgaggagaaggagtctcttctg
gagctgtgggagctccgccggcagcagtacgaacagtgcatggacctgcagctcttctac
agggacacggagcaggtggacaactggatgagcaagcaggaggcgttcctcctcaacgaa
gacctgggcgactccctggacagcgtggaggccctgctgaagaaacacgaggactttgag
aagtctctcagcgcacaggaggagaagatcaccgcccttgatgagttcgctaccaagctc
atcgataacaaccactatgccaaggaggatgtcgctacccgcagagatgctctcctcaac
cgccgcaacgccctccacgagcgcgcccagtcgcgccgcgccggcctggaggactccttc
cacctgcagcagttcttcagggactccgacgagctcaagagctggatcaacgagaagatg
aagaccgccaccgacgaggcctacaaagacccctccaacctccagggcaaggtgcagaag
caccaggccttcgaggcggagctgtcggccaaccagagccgcatcgacgccctgcagaag
tcgggccaggagctcctggacgggaagcactacgccgcggacgaggtgtccgggcgcatg
gaggaggtcagctcccagtggaagaagctgctggaggccaccgagctcaaaggcatcaag
ctgcgcgaggccaaccagcagcagcagttcaaccgcaacgtggaggacatcgagctgtgg
ctgtacgaggtggagggccagctggcctccgacgactacggcaaggacctgaccagcgtc
cagaacctgcagaagaagcacgccctgctggaggccgacgtggccgcgcaccaggaccgc
attgacggcatcaccatccaggcccggcagttccaggaggccggccactttgacgccgac
aacatccgcaagaagcaggaggcgctggtgacgcgctacgacggcctgcgcgagcccatg
acggcccgcaagcagaagctgtccgactccctgcggctgcagcagctcttcagggacgtg
gaggacgaggagacctggatccgcgagaaggagcccatcgccgcctccaccaaccgaggc
aaagacctgatcggcgtgcagaacctcctgaagaagcaccaggccctgcaggcggagatc
tcgggccacgagccccgcatcaaggccgtcagccagaagggcgacgccatggtggaggaa
ggccactttgcggcggaggaggtgaaggtgaagctgggcgagctgaacggccgctgggac
acgctgaagggcaaggcggcgcagcggcgccaggacctggaggactccctgcaggcccag
cagtacttcgccgacgccaacgaggccgagtcctggatgagggagaaggagcccatcgtg
ggcagccccgactacggcaaggacgaggactctgccgaggctctgctgaagaagcacgag
gccctgatgtcggacctgagcgcctacggcagcagcatccacgcgctgaaagaacaggcc
cagtcctgcaggcaacaagtggcccccacggacgacgagacggggaaggagctggtcctg
gccctgtacgactaccaggagaagagcccccgtgaggtcaccatgaagaagggggacatc
ctcactctactcaacagcaccaacaaggactggtggaaggtggaggtgaacgaccggcag
ggcttcgtacccgcggcctacgtgaagaagctggaccccacccagtcgtcgtccagggag
aacctcctggacgagcagggcagcatcgccctgcgccaggaacaggcggataaccagctg
gtcgccaaggaggcgtgcagcgtgtctgtacgcatgaagcaggtggaagagctgtacggc
actctgctggagctgggggacaagcgcaaggacatgctggagaagagctgcaagaagttc
atgctgttccgcgaggccaacgagctgcagcagtggatcaacgagaaggagggcgcgctc
accaacgaggagatgggctccgacctggagcaggtggaggtgctgcagaagaagtttgac
gacttccagaaggacctgaaggccaacgagtcccgtctgcgggacatcaacaaggtggcg
tccgagctggagtctgagggcctgatggccgaggaggcccccatggtgcagtcccagcaa
caagaaatgcttggatccgcccctggcaaggatgaagccgacgcaaagaatgcatctcca
tggaagaatgtacgcatggccgttcaaaccacggctaactttaataccatcaaggagctg
aacaaccgatggaggtccctgcagcagctggctgaggacaggagcaacatgctgggcagt
gcccatgaggtgcagcgcttccacagggatgctgatgagaccaaagagtggatcgaggag
aagaaccaggcgctgaacaccgataactacggccacgacctggccagcgtccaggccctg
cagcggaaacacgagggcttcgagagagacctggccgccctgggagacaaggtgaactct
ctgggggagacggcggagcgtctgatccagtcccatcccgaggcggtggacgacatccag
gagaagtgcacggagctgaacacggcgtggagcagcctggtgggccgcgccgaccagagg
aaggacaagctgggcaactcccacgacctgcagcgcttcctgtccgacttcagagatctg
acgtcctggatcaacggcatccgaggcctggtgtcctctgaggagctggccaaggacgtg
acgggagctgaggcccttctggagagacaccaggagcaccgcactgagatcgacgcccgt
gccggaaccttccaggccttcgagcagttcggccagcagctgctggcgcggggccactac
gccagccccgagatccagcagaagctggaggccctggacagcgagcgggccggcctggag
aaggcctgggtgcagcgccgcatgatgctggaccagtgcctggagctccagctgttcaac
cgcgactgcgagcaggcggagaactggatggcggcccgcgaggccttcctggccagcgac
gacaaaggagactccctggacagcgtggaggcgctgatcaagaagcacgaggacttcgac
aaggccatcaccgtgcaggaggagaagatcgccgctctgcagtcgttcgccgaccagctg
atcggagccgaccactacgccaagcccgagatcttcaaccgccgcaccgaggtcctcgac
aggtggcttcgcctgaagacccagatgatcgagaagcgctccaagctgggcgagtcccag
accctgcagcagttcagccgcgacgtggacgagatcgaggcctggatcagcgagaagctg
cagacggccaccgacgagtcctacaaggaccccaccaacatccagctttccaaactgctg
agcaagcaccagaagcaccaggccttcgaggcggagctgcacgccaacgcggaccgcatc
cgcggggtcatcgacacgggcaacgccctcatccagagaggggcctgctccgggagcgag
gacgccgtcaaggtgcggctgaacgctctggatgagcagtggcagttcctggtcaacaag
tcagcggagaagagccagaagctgaaggaggccaacaagcagcagaacttcaacaccggc
atcaaggactttgacttctggctgtccgaggtggacgccctgctggcctccgaggactac
ggcaaagacctggcatcggtcaacaacctgctgaagaagcaccagctgctggaggcggac
atctccgcccacgaggaccggctgaaggacctgaacggccaggcggacagcctgatgggc
agcatcgccttcgacaccacggtggtgaaggacaagcgcgacgccgtcaacggccgcttc
gccaagatcaagagcatggcggcgggccggcgcgccaagctcaacgagtcccaccgcctg
caccagttcttcagggacctggacgacgaggagtcctggatcaaggaaaagaagttgttg
gtgagttcggaggactatggacgtgatttgacgggagtgcagaatctgaggaagaagcac
aagaggctggaagcagagctgggggcccacgagccggccatccagtctgtactggagacg
gggaagaagctgtccgatgacaacaccatcgggcaggaggagatccaacagaggctggcc
cagtttgtggaccactggaaggagctcaaggacctgtctggagcgagggggcagaggttg
gaagagtcgctggagtaccagcagtttgtggcgaacgtggaagaggaagaggcgtggata
aacgagaagttgaacctggtggggagcgaggactacggcgacaccctggctgcggtgcag
ggtctgctgaaaaaacacgaagcattcgagacggacttcaccgtgcacagggacagggtc
aacgacgtgtgcaccaatggagacgagctcatcaagaagaacaaccatcatgttgacaac
atcagtgccaagatggccgccctgcggggcaaggtgtcggagctggagcgggcggcggcc
cagaggaaggccaagctggacgagaactctgccttcctgcagttcaactggaaggccgac
gtggtggagtcctggatcggggagaaggagaacagcctgaagactgacgactacggcagg
gacctgtcctctgtgcagaccctgctcaccaaacaggagacgttcgacgccggcctgcag
gccttccagcaggagggcatcaccaacatcaccgcgctgatggaccagctgctggccgcc
cagcacgtccagtccaaggccatcgagacgcgccacgccgccctcatcaagcgctggaac
cagctgctctccaactcggccgcacgcaagaagaagctgctggaggcccagcagcacttc
aggaaggtggaggacctgttcctcaccttcgccaagaaggcgtcggccttcaacagctgg
ttcgagaacgcggaggaggacctgacggacccggtgcgctgcaactctctggaggagatc
cgggcgctgcgcgaggcccacgatgccttccgctcctccctgagctcggcgcaggccgac
ttcggccagctggccgagctggaccagcagatcaagagctaccaggtggtgtccaatccc
tacacctggttcaccatggaggccctggaggagacctggaggaacctgcagaagatcatc
aaggagcgcgagctggagctacagaaggagcagaggaggcaggaggagaacgacaagctg
aggcaggagttcgcccagcacgccaacaccttccaccagtggctgcaggagaccaggaca
tatcttctggacgggtcttgcatggtagaagaatctggaacattggaatcacaacttgaa
gccaccaagcgcaagcaccaggagatccgggcgatgcggagccagctgaagaagatcgag
gacctcggagcggccatggaggaggccctgatcctggacaacaagtacacggagcacagc
acggtgggcctggcccagcagtgggaccagctggaccagctgggcatgaggatgcagcac
aacctggagcagcagatacaggccaggaacaccacgggagtcacagaagaagcgctgaag
gagttcagcatgatgttcaaacatttcgacaaagagaagtccggccgtctgaaccaccag
gagttcaagtcgtgtctgcgctcgctgggctacgacctgcccatggtggaggagggagag
cccgacccagagtttgagtccatcctcgacacggtggaccccaacagggatggcaacgta
tcattgcaagagtacatggctttcatgatcagccgcgagacggagaacgtgaagtccagc
gaggagatcgagagcgccttccgcgccctcagcacagaggccaagccctacgtcaccaaa
gaagaactctaccagaacctgacgaaggaacaagcagactactgcatgtcgcacatgaag
ccctacctagacggcaagggacgggagctgccgtcggccttcgactttgtggaattcaca
cgctcgctcttcgtcaactga
DBGET
integrated database retrieval system
