Gadus morhua (Atlantic cod): 115542125
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Entry
115542125 CDS
T10832
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmh03016
]
115542125 (pus1)
Enzymes [BR:
gmh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
115542125 (pus1)
Transfer RNA biogenesis [BR:
gmh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
115542125 (pus1)
Prokaryotic type
115542125 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
115542125
NCBI-ProteinID:
XP_030210120
Ensembl:
ENSGMOG00000008143
LinkDB
All DBs
Position
4:10077634..10080829
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AA seq
417 aa
AA seq
DB search
MLKIPHLLRALTNAQLLHFNYKGFQHRSRCTMSQGELLTTMSTKRVNEEAISVEDEQITK
KVKLEEENVDNEKKYPKKKVVLLVAYSGKGYYGMQRNTGTSQFRTIEDELVSALIKSGCI
PENHGDEMKKMSFQRCARTDKGVSAAGQVVSLKLRLIEDIMENINKHLPAQIRILGFKRV
TQGFNSKNNCDARTYSYMLPTVAFAPKDYDTQKSAAFRLDPETLTRANSLFSLYKGTHNF
HNFTSQKSPQDPSARRYITEMSCEEPFLSGDSEFAVITVRGQSFMLHQIRKMIGLVIAVI
KGYAKEEVLERSWGNDKVDIPRAPGLGLVLERVHFDRYNQRFGGDGLHQRLDWAAEEESI
KGFKKAHIYPSIVDTESEEHSMISWMASLPIHDYEASAADRREKDQKQENDVGNESD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaataccacatcttcttcgtgccttaactaacgcgcaactcttgcatttcaat
tacaaaggattccaacatagatcacgttgcacgatgagccaaggggagctgctaaccacg
atgtcaactaaaagagtcaacgaggaggcaatctctgttgaagatgagcagataacaaaa
aaggtcaagttagaagaagaaaacgttgacaatgaaaagaagtatcctaaaaagaaggtg
gttctactcgtggcgtattctggaaaaggatattatgggatgcagcgaaatactggaacc
tcgcagttcagaacgattgaagatgagttagtctccgctcttattaaatcgggctgcatt
cctgaaaaccatggagatgaaatgaagaaaatgtctttccaaagatgtgcaagaacagat
aagggtgtgtctgcagcaggccaggtggtgtcacttaagctgcggttgattgaagacata
atggaaaatatcaacaagcatcttcctgcgcaaatcagaattctaggtttcaaacgagtg
acccaaggcttcaactccaaaaacaactgtgatgcgcgtacatattcctacatgcttccc
actgtggcctttgccccaaaggactacgacacccagaagtcggccgctttccgcttggac
ccagagaccctcaccagagccaactcgctcttttccctttacaaaggcacgcacaacttc
cacaacttcacctcgcagaaaagcccccaggaccccagcgcccgccgctacatcacggag
atgtcctgcgaggagcccttcctcagcggcgactcagagttcgccgtgatcacggtgcgc
ggccagagcttcatgctgcaccagatccgcaagatgatcggcctggtgatcgcagtgatc
aagggctacgccaaggaggaggtgctggagcgcagctggggcaacgacaaggtggacatc
ccccgggcccctggactgggcctggtgctggagagggtgcactttgaccgctacaaccag
cgcttcggcggggacggcctccaccagcgcctggattgggccgcggaggaggagtcgatt
aagggcttcaagaaggcccacatctaccccagcatcgtggacacggagtcggaagagcac
tcgatgatcagctggatggcctcccttcccatccatgactacgaggcgtcggcggcggat
cgccgggagaaggaccagaaacaggaaaatgatgtggggaatgaatccgattag
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