Gadus morhua (Atlantic cod): 115542147
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Entry
115542147 CDS
T10832
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
115542147 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmh03019
]
115542147 (myo5b)
04131 Membrane trafficking [BR:
gmh04131
]
115542147 (myo5b)
03029 Mitochondrial biogenesis [BR:
gmh03029
]
115542147 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gmh04812
]
115542147 (myo5b)
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
115542147 (myo5b)
mRNA cycle factors
P-body specific factors
115542147 (myo5b)
Membrane trafficking [BR:
gmh04131
]
Others
Actin-binding proteins
Myosins
115542147 (myo5b)
Mitochondrial biogenesis [BR:
gmh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
115542147 (myo5b)
Cytoskeleton proteins [BR:
gmh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
115542147 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_22
AAA_16
Ac76
Motif
Other DBs
NCBI-GeneID:
115542147
NCBI-ProteinID:
XP_030210147
Ensembl:
ENSGMOG00000019264
LinkDB
All DBs
Position
4:complement(9469964..9510718)
Genome browser
AA seq
1821 aa
AA seq
DB search
MSVNELYTQRTRVWIADSEDVWKPAEITKDYKEGEPILHLRQEDETPLEYRIGPKDPLPF
LRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLAIYGE
EVINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRFFA
TVGGSAGNTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDRQYHIIGANMRT
YLLEKSRVVFQAEDERNYHIFYQLCACASLPEFKDLALSSAEDFIYTSFGENIFIEGVND
AVDFEKTKEAFTLLGVKENMQSSIIKIIAAILHLGNVEICSERDGDSCHVLGEDRHLKHF
CRLLGVELEQMEHWLCHRKLVTSSETYVKNMSCKQASNARDALAKHIYAHMFDWIVEHVN
KALHTTAKQRSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYMKE
QIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECRVPKGTDENWCQKLYGKHSGSAHFQKP
RMSNTSFIIIHFADKVEYQCEGFLEKNRDTVYEEQINILKASKFQMVADLFLEKKESSSS
TPGSKTSRINVRSAKTVPKTPNKEHRKTVGHQFRSSLQLLMETLNATTPHYVRCIKPNDE
KMSFVFDSKRAVQQLRACGVLETIRISAAGYPSRWTYQDFFNRYRVLMKRADMTNSDKKL
VCRNLLATLIKDEDKFQFGKTKIFFRAGQVAYLEKLRADKFRSACIKIQKTVRGWLQRLR
YRKIRRSAVLLQRYGRGYMARRYAEQLRLTRAAVICQKQCRMVRDRRAFLRVRRAVVTIQ
AYTRGMYTRRIFKEFLLHHKAMVIQKNVRGWLARKKFRRARDAAVTIQCAVRCMRAKRLT
KQLKIDARSAQHLKKLNSGMENKIVQLQRKMDDQSKDLKTQNEQLLSHNNNLGSEVGKLQ
KELQQVRLRHGDGNQLTSLQEELARLRAELKESHDLNQRQEAEHGSEKLVLTQRVEELEK
ENHLLKSDKEQMNHKLLQHSKSTEDQESSASQRETDLQKDLDQERLRYQNLLKEFSRMEQ
RFDNLEEEVALTKRGHRRNPSNVSSLESDSNYPSISTSEVGDAEDAIQMVEDIGVEKAAM
DISIFMKLQKRVRELELERKRLQAHIDKMEELAKSKVTERRNLTSQDEVADLAYNSLKRQ
ELESENKKLKNDLNEMRRTVSDRVSDDSSSNELQESYKLLLTQLKAANEELDMRKEEVLL
LRTKIVSGPQQNGLVDSEKVSSIEAEVNNKKPPKDKEEALKAYQEVSESKRVLEAQVQSL
SRQHKDELEALHTQIEVLRGDLEKKTEALNHTMSLSPEAQVEYSVQQEITRLTNDNLDLK
ELVEKLEKNERKLKKQLRIYMKKIQELEVSPVTPVDSRSRPELSRQVTVQRREKDFEGML
EYCKEDEALLLKALIAEIRPSSVSATVPCLPAYILFMCIRHADYVNDDEKVESLLTSTIN
AIKKVLKKNVNDFEMVSFWLANTSRLLHCLKQYSGDEAFMTQNTGKQNEHCLKNFDLAEY
RQVLSDLSIQIYQQLIKVAEGIMQPMIVSAMLESESIPSLSGVKPMGYRNRSSSMDHDGN
GPSTYTLGALIRQLGQFHSVMGEHGLDPEIVSQVVRQLFHCINAFTLNNLLLRKDVCSWS
TGMQLRYNISQMEEWLRANNLQQSKAAPTLEPIIQAAQLLQVKKKTSQDAEAICALCTAL
TMQQIVKILNLYTPLNEFEERVTVSFIRNIQSNLQERNDAPTLLVDTKHTFPVLFPYTPS
ALSLETLHIPASLGLGFLVRV
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaacgagttgtacacacagcggactcgggtgtggatcgccgactctgaggat
gtgtggaagccggcggagatcaccaaagactacaaggagggggagcccatcctgcacctc
aggcaggaggatgagacgccccttgagtaccgtatcggtccgaaagaccccctccccttc
ctacgaaaccctgacatcctggtgggagagaatgacctcacggccctcagctacctgcac
gagccggccgtcctgcacaacctcaaggtccgcttccttgagtccaaccacatctacacc
tactgtgggatcgtgttggtggccatcaacccctatgagcagctggccatctacggcgag
gaggtgatcaatgcctacagcgggcagaacatgggggacatggacccccacatatttgcg
gtggcggaggaggcgtacaagcagatggccagggacgagcgcaaccagtccatcatcgtg
agcggcgagtccggcgccgggaagacggtgtcggccaagtacgccatgcgcttcttcgcc
acggtgggcgggtcggcggggaacaccaacgtggaggagaaggtcctggcctccagtccc
atcatggaggctatcggaaacgccaagacgacccgcaacgacaacagcagtcgcttcggg
aagtacatccagatcggtttcgaccggcagtaccacatcatcggggccaacatgcgcacc
tacctgctggagaagtcccgcgtggtctttcaggccgaggatgagaggaactaccacatc
ttttatcagctctgtgcctgcgctagtttaccagagtttaaagacttggccttgtcgagt
gcagaggactttatctacacgtcgttcggggagaacatcttcatagagggagtcaacgac
gcggtggactttgagaagaccaaggaagctttcaccctcctgggtgtgaaggagaacatg
cagagcagcattattaagatcatagctgccatcctgcatctgggcaacgtggagatctgc
tccgagcgggacggggactcctgccacgttttgggcgaagaccgccacctgaagcacttc
tgccgcctgctgggcgtggagctggagcagatggagcactggctgtgtcaccggaagctg
gtgacttcgtctgagacctacgtgaagaacatgtcctgcaagcaggccagcaacgcccgc
gacgccctggccaagcacatctacgcgcacatgttcgactggatcgtggagcacgtcaac
aaggcgctgcacaccaccgccaagcagcgctccttcatcggcgtgctggacatctacggg
ttcgagacatttgagatcaacagttttgagcagttctgcatcaactacgccaatgagaag
ctgcagcaacagttcaactcgcacgtgttcaagctagagcaggaggagtacatgaaggaa
cagattccctggaccctgatagacttctatgacaaccagccgtgcatagacctgatcgag
gccaagctgggcatcctggacctgctggacgaagagtgccgagtgcccaagggcacggat
gagaactggtgccagaagctgtacgggaagcactcaggaagcgctcacttccagaagcca
cgcatgtccaacacctccttcatcatcatccacttcgcagacaaggtggagtaccagtgt
gagggcttcctggagaagaacagagacaccgtgtacgaggaacagatcaatatcctgaaa
gctagtaagtttcagatggtggccgatctattcctggagaagaaggagtccagctcttcc
acacccggtagtaaaacctccaggattaacgtgaggtccgccaagaccgtcccgaagacc
cccaacaaggagcacaggaagacagtaggccaccagttccggagctccctccagctcctc
atggagactctgaacgccaccacgcctcactacgtgcgctgcatcaagcccaacgacgag
aagatgtccttcgtgttcgactccaagcgagcggttcaacagctgagggcatgtggagtc
ctggagaccattcgcatcagtgctgctggttacccgtcaagatggacgtaccaagacttc
ttcaacagataccgggtgctcatgaagagggcggacatgaccaattccgacaagaagctt
gtgtgtcggaacctgctggcgaccctgatcaaggacgaggacaagttccagttcggcaag
acgaagatcttcttccgggcgggccaggtggcgtacctggagaagctgcgggcggacaag
ttccgctcggcgtgcatcaagatccagaagacggtgcgcggctggctccagcggctccgc
taccgcaagatccgccgctctgcagtgctgctgcagagatacggccgcggctacatggcc
cgcaggtacgccgagcagctgaggctgacgcgggcggcggtcatctgccagaagcagtgc
cgcatggtgagagacagacgggccttcctgagggtgagacgggcagtggtcaccatccag
gcctacacccggggcatgtacacccgcaggatcttcaaggagttcctcctgcaccacaag
gccatggtgatccagaagaacgtgcgcggctggctggcccggaagaagttccggcgggcg
cgcgacgcggccgtcaccatccagtgcgccgtgcgctgcatgcgggccaagcggctcacc
aagcagctgaagatcgacgcccgctcggcccagcacctgaagaagctcaactcgggcatg
gagaacaagatcgtgcagctccagaggaagatggacgaccagtccaaggacctcaagacc
cagaacgagcagctgctgtcccacaacaataacctggggtcggaggtcggcaagctgcag
aaggagctgcagcaggtccgcctccgccacggcgacggcaaccaactgacctccctgcag
gaggagctggcccggctgagggcggagctaaaggagtcacatgacttgaaccagaggcag
gaggcggagcacggcagcgagaagctggtcctgactcagcgagtggaggagttggagaag
gagaaccacctgctgaagagcgataaggagcagatgaaccacaagctgctgcagcactcc
aagagcactgaagaccaggagagcagcgcctcccagagggagacggacctccagaaggac
ctggaccaggagagactccgctaccagaacctcctgaaggagttctccaggatggagcag
cgcttcgacaacctggaggaggaggtggcgctcaccaagcggggccacaggagaaacccg
tccaacgtgagcagcctggagtctgactccaactacccctccatctccacctcggaggtg
ggcgacgcggaggacgccattcagatggtggaggacattggcgtggagaaggcagcgatg
gacatcagcatcttcatgaagctgcagaagcgcgtgcgggagctggaactagagaggaag
aggttgcaggcccacatagacaagatggaggagcttgccaagagcaaggtcacggagaga
aggaacttgacatcccaggatgaagtcgcagatctggcctacaacagtttgaagaggcaa
gagctggaatcggagaacaagaagctgaagaacgacctgaacgagatgaggaggaccgtc
agcgaccgggtctccgacgacagctcgtccaatgagcttcaggagagctacaagctgctg
ctcacccagctgaaagcggccaatgaggagctggatatgcgcaaggaggaggtgcttctg
ctcagaaccaagatagtcagtggcccacagcaaaatggacttgttgacagtgaaaaggtg
agcagcatcgaggctgaggtgaacaacaagaaacctcccaaagataaggaggaggcgctg
aaggcctaccaggaggtgtctgagtccaagagggtgctggaggcccaggtgcagagcctg
tcccggcagcataaggacgagctggaggccctgcacacccagatcgaggtgctgcgcggc
gacctggagaagaagacggaggcgctgaaccacaccatgtccctgtcccccgaggcccag
gtggagtacagcgtgcagcaggagatcacccggctcaccaacgacaacctggacctgaag
gagctggtggagaagctggagaagaatgagaggaagttgaagaagcagctcaggatctac
atgaagaagatccaggaacttgaggtgtcccctgtgacgccggtggactcgcggtcgcgg
cccgagctcagccgccaggtgacggtgcagcgccgggagaaggactttgagggcatgctg
gagtactgcaaggaggacgaggccctgctgctcaaggccctcatcgccgagatccgcccc
agctccgtgtcggcgacggtgccctgcctcccggcctacatcctgttcatgtgcatccgc
cacgccgactacgtcaacgacgacgagaaggtggagtccctgctcacttccaccatcaac
gccatcaagaaggtcctcaagaaaaacgtcaacgactttgagatggtgtccttctggctg
gccaacactagccgcctgctgcactgcctgaagcaatacagcggcgatgaggcgttcatg
acccagaacacgggcaagcagaacgagcactgcctgaagaactttgacctggccgagtac
cggcaggtgctgagcgacctctccatccagatctaccagcagctcatcaaggtggccgag
ggcatcatgcagcccatgatcgtgtcggccatgctggagagcgagagcatccccagcctg
tccggggtgaagcccatgggctaccggaaccgctcgtccagcatggaccacgacggcaac
gggcccagcacctacaccctgggcgcgctgatccgccagctgggccagttccacagcgtg
atgggtgagcacggcctggaccccgagatcgtcagccaggtggtccggcagctgttccac
tgcatcaacgccttcaccctcaacaacctgctgctgcgcaaggacgtgtgctcgtggagc
accggcatgcagctcaggtacaacatcagccagatggaggagtggctgcgggccaacaac
ctgcagcagagcaaggcggcgcccacgctggagcccatcatccaggccgcccagctgctg
caggtcaagaagaagacgtcccaggacgccgaggccatctgcgccctctgcaccgcactc
accatgcagcagattgtgaagattctgaacctgtacactccgctgaacgagtttgaggag
cgggtcaccgtctccttcatccgaaacattcagagtaacctccaggagaggaacgacgcg
cccacgctgctggtagacaccaagcacaccttcccggtgctcttcccctacacgccctcc
gccctcagcctggagaccctgcacatccccgcctccctggggctgggcttcctggtcagg
gtgtag
DBGET
integrated database retrieval system
