Gadus morhua (Atlantic cod): 115542187
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Entry
115542187 CDS
T10832
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
KO
K11088
small nuclear ribonucleoprotein D3
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115542187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmh03019
]
115542187
03041 Spliceosome [BR:
gmh03041
]
115542187
03032 DNA replication proteins [BR:
gmh03032
]
115542187
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
115542187
Spliceosome [BR:
gmh03041
]
Complex A
U1 snRNP components
Sm proteins
115542187
U2 snRNP components
115542187
Complex B
U1 snRNP components
115542187
U4/U6.U5 tri-snRNP components
115542187
Complex C
U2 snRNP components
115542187
DNA replication proteins [BR:
gmh03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
115542187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Kringle
Motif
Other DBs
NCBI-GeneID:
115542187
NCBI-ProteinID:
XP_030210205
Ensembl:
ENSGMOG00000027140
LinkDB
All DBs
Position
4:15219756..15222364
Genome browser
AA seq
127 aa
AA seq
DB search
MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGSGAGRGKAAILKAQVAARGRGRGGMGRG
NIFQKRR
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcggcgtgcctatcaaggttctccatgaagcggagggacacatcgtgacctgt
gagacgaacactggggaggtgtacaggggcaagctcattgaagccgaagacaacatgaac
tgccaaatgtccaacatcactgtgacctaccgcgatgggagagtagcccagctggagcag
gtctacatccgtgggagcaagatccgctttctcatcctaccagacatgttaaagaatgca
cccatgttaaagagcatgaagaacaagaaccagggatcaggggccgggaggggcaaggcg
gccattctcaaagctcaagtggcggccagaggtcggggtcgtggaggaatgggaagaggc
aacatcttccagaaaaggcgataa
DBGET
integrated database retrieval system
