KEGG   Gadus morhua (Atlantic cod): 115542237
Entry
115542237         CDS       T10832                                 
Symbol
cdk9
Name
(RefSeq) cyclin-dependent kinase 9
  KO
K02211  cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    115542237 (cdk9)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:gmh01001]
    115542237 (cdk9)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gmh03021]
    115542237 (cdk9)
Enzymes [BR:gmh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     115542237 (cdk9)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     115542237 (cdk9)
Protein kinases [BR:gmh01001]
 Serine/threonine kinases: CMGC group
  CDK family
   115542237 (cdk9)
Transcription machinery [BR:gmh03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     115542237 (cdk9)
    Brd4/P-TEFb complex
     115542237 (cdk9)
    7SK RNP complex
     115542237 (cdk9)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Haspin_kinase ABC1 Kinase-like RIO1 Pkinase_fungal
Other DBs
NCBI-GeneID: 115542237
NCBI-ProteinID: XP_030210263
Ensembl: ENSGMOG00000034408
LinkDB
Position
4:11672708..11676740
AA seq 397 aa
MQREKTSNAAAAAAAAEKPDREAAIMSKYYDGVEFPFCDEFSKYEKLAKIGQGTFGEVFK
AKHRQTTKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATQFNRY
KGSIYLVFDFCEHDLAGLLSNANVKFTLAEIKKVMQMLLNGLYYIHRNKILHRDMKAANV
LITRDGVLKLADFGLARAFSLAKGSQGNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGA
GCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITADVWPEVDKKYELYQKMELPKGQKRK
VKDRLKAYVKDPYALDLIDKLLVLDPGQRIDSDDALNHDFFWSDPMPSDLKNMLSTHNTS
MFEYLAPPRRRGHMPQQQPNQNRNPATTSQTEFDRVF
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgcaacgagaaaagacaagcaatgcggctgccgccgctgcggccgctgagaagcccgac
cgagaggccgccatcatgtccaaatactacgacggcgtggaattccctttctgcgacgag
ttctcaaaatatgaaaagctggctaaaattggacaggggacatttggagaagtattcaaa
gcaaagcaccggcagactacgaaaaaagttgccctgaagaaggttctcatggaaaacgag
aaagaagggtttccaatcacagctctgagggaaatcaagatcctacaactgctgaaacat
gaaaacgtagtgaatctgattgaaatctgccgaaccaaagccactcagttcaacagatac
aaaggcagcatctacctggtgtttgacttctgtgagcatgacctggccgggctgctgagc
aacgccaatgtaaagttcaccttggcagaaatcaagaaggtcatgcagatgttgctcaat
ggcctttattacatccacaggaacaagatcctccacagagacatgaaggcggccaacgtg
ctgatcaccagggacggtgtgctgaagctggctgactttggcctggcccgagccttcagc
ctggccaaggggagccaggggaaccgctacaccaaccgcgtggtcaccctgtggtaccgg
ccgccggagctgctgctaggcgagcgggactacgggccgcccatcgacctgtggggcgcc
ggctgtatcatggccgagatgtggaccaggagtcccatcatgcagggcaacacagagcag
caccagctcacactaatcagccagctgtgtggctccatcaccgctgacgtgtggccagag
gtggacaagaagtacgagctctaccagaagatggagctgcccaagggccagaagcgcaag
gtgaaggaccggctgaaggcctacgtcaaggacccgtacgccctggacctgatcgacaag
ctgctggtgctggacccggggcagcgcatcgacagcgacgacgcgctcaaccacgacttc
ttctggtcggaccccatgccgtcggatctgaagaacatgctgtccacgcacaacacctcc
atgtttgagtacctggccccgccccgccgaaggggtcacatgccccagcagcagcccaat
cagaaccggaacccggccaccaccagccagactgagttcgatcgggtgttttag

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