Gadus morhua (Atlantic cod): 115542257
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Entry
115542257 CDS
T10832
Name
(RefSeq) dystrophin-like isoform X1
KO
K10366
dystrophin
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115542257
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gmh04812
]
115542257
Cytoskeleton proteins [BR:
gmh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115542257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
EF-hand_2
EF-hand_3
Spectrin_SYNE1
ZZ
TerB_N
SR_desmoplakin_3
DUF8612
DUF5601
DUF5847
Motif
Other DBs
NCBI-GeneID:
115542257
NCBI-ProteinID:
XP_030210302
LinkDB
All DBs
Position
4:<36083909..36147777
Genome browser
AA seq
2667 aa
AA seq
DB search
MEQRLRDVRVLQGALTEHQGEVDYLTAAVEQVFQKAPADISQRYRLEMDAIMARWKRLAA
TLDDNAQKIQELMAKLMQFENDVTTLKKWMADVDVFLNEEWPALGDSEALEKQLEQCTAL
VNDIHTIQPSLNGINEVGLHLKKEAEPLFAVHIQKELDDLNGQWEMVCKQAYAKKCALKG
GLDKTMALRKEMREMQEWINQAEEDYLERDFTYKTPEELRRAVEELKRAQEEVHSKALKV
KLLTDSVNSFIAKAPPTAHDALRSELDLLTANYQRLCSRLDGKCKTLEEVWACWCELLSY
LQQENDFLDQLEQKLEETENLQGGSSEELQEALDGLEALLQHPEDNRNQIRELSQTLIDG
GVLDELIQQKLDAFNTRWDELMARAVQRQKELDEGARRAQEYERGLRSIQEALASVDRHL
SSYLDDQVDAQQIPQEAQKIQTELSGHEEALEEIKKKNEEKDPSHRIMGQIDLTQKMLGD
VWTKFRLFQKPANFDTRLADCERTLAGVKGQLGVLDVRSVELDVVQSQLEQCMKLYKVLS
EVKGEVETVIKTGRQVVQRQQTEQPKELDDRLTALKLLYNQLGAQVTESKLELEKSLKLS
KKLRKELNSLTEWLAATDAQLTRRSAVEGMPSDLEAEVDWAQSVAGETSRREPQLQAVGE
LAEALKAVLRGHGGLVDDKVSLLRCNWIAVTSRAEEWLNLLLDYQRQMQKLDGAIEEVNK
WIEGAEGKMDQMDSLGPNDATLKTLRAELEATGSRVEELRALAQDLTSTRGEAFHRQVGQ
RLELLRRRYDAIARRIGEAQTEASPKELEHYHSEAQIWLDLLEEEAQQGENLKEEDFQED
KDFEEGAVKELLLKGESLQKRVPDEDKRELIRHKQDQLNSKYNTVKDLRVMRNRKALAIA
PQWYQYRRKSHDLLAWLDDIQRSVDQLPDPPEEQRVKEIGSEFDQKKEELKEVQGLANQL
SEAGAANLVEPRLLQLNTRWVEVEGKFLPFKRHCEYMTELQVLLRSVSEADFKLNSPEYW
PAVFYNLPQQHTCIKEAKVSIDQLVAPVDEALGRRDEMVSGARPLEAQKIHDTALLLKTN
WDKLNKLHQDRLRRWEESNTKWLKFSAEQKALEAWLEEAENTLNLAEGSPDTHRQHLRDL
TEAVPAKEVALGRVTSAGKEVAQLSTPDDAGRLLLALKSLHTRWASALGRLEQHRRRSSE
ARSAAATLEEDLGSMQAWLDQADGVLAIPIHPAEPQHIRDTLVKVQARVDEIPGRALAVE
DLNQRLKQNQVPAEKHADIRVINSRFAQVSRDLPEWQLEMEGLLRDLERLQGQLADLSAW
AARARTRLESSPEELEPKLVEEVQAKEPEVESLLDRANQLYKDNPPSQSDKEKHAQLTED
WSVILELMRQHRERMALLAARKSQQTLLGSGQAESAALAQFHKSWAELTDWLSMLDNMVQ
NKRVVVADLDDINSNIQGLKASLQEMEQRRPLLEKQVTAAQNLKNKTSNQETRNAITDRI
ERLQAHWEDSQTKLSDRTAQLHNMLKDSTDWLESRRKVEPLIKEANERMDAMTEITYTVE
ALKKQNNELKGLAKDLSAWWGQVEQCNSQADGLLRQYSADDTHLVRHLHDTINGSWTHVS
KRVSEREGALEGALRLLQQFHLDLEKFLNWLTEAETTCNVLVDATSQERLQEQPHAAKNL
LAQWKDLQEEVEGQAELYHSLDENGQRVVSALGGSEEAGPLQRRLDNMGQRWNDLRSKTI
SMRAHLDSEMAPWKRLHMTLQELLNWLRVKGQQLEKEPPVGGDVPAVQTQLDTHRLFRKE
LRAKEPVISRSLGDVRVFLSELPRDTPSPDHRDISPEERAQNVGRVLRKEAEDLGAGWER
LGGDAAAWQRRLELALQRLQELQEARDLLEGQLRQAEMVKEAWEPVGDLVTDSLPEHIER
VKEFQEEIAPIQDDVTHMNDLASTFAPADIQLSPSNLERIEDLNTRWRLLQVTMDTGDRR
TGESEVDSKLSIKDHLKQLTDTHRDYMLLHGSVDSPFEQGTSPNNVPYYINEKAEPFAMT
QAPHQTQTTCWDHPKMAELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLGMPAACEV
IEQHGLKQNEQLLDTPTLVACLTSLYQQLEATHAHLVSVPLCVDMCLNWLLNVYDTGRTG
KIRTLSFKTGIISLCKAHLEDKYRFLFRQVASATGFCDQRRLGLLLHDSIQIPRQLGEVA
SFGGSNIEPSVRSCFQFANNKPELEAAMFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAK
CNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMQYPMVEYCTPTTSGEDVRDF
AKVLKNKFRTKRYFAKHPRMGYLPVQTILEGDNMETPVTLINFWPVEHLPGSSPQLSHDD
THTRIEHYASRLAEMENRNGTYLNDSISPNESIDDEHMLIQHYCQSLSQGSPLSQPRSPA
QILISMETEEKGELERVLGDLEQENRKLQGEYDRLKRAHDRKGLSPLPSPPHMLPASPPS
PRDAELLAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQTDSKVNGTALSSP
STSSQRSDSSLPLLRMAASQTTDTMGDDELSSPSQDASGLEEVMEQLNNSFPHSQGPSVG
SLFHMADDLGRAMESLVTVMTDEQNGD
NT seq
8004 nt
NT seq
+upstream
nt +downstream
nt
atggagcagagactgcgggacgtgcgggtcctccagggggcccttacggagcaccagggc
gaggtagactacctgaccgccgccgtggagcaggtcttccagaaggccccggcagacatc
agccagaggtaccggctggagatggacgccatcatggcccgctggaagcgcctggccgcc
acgctggacgacaacgcccagaagatccaggagctcatggccaagctcatgcagtttgag
aacgacgtgaccaccctgaagaagtggatggcggacgtggacgtcttcctgaacgaggag
tggcccgcgctgggggattctgaggcgctggagaaacagctggagcagtgcaccgccctg
gtgaatgacatccacaccatccaacccagcctcaacggtatcaacgaggtgggcctgcac
ctgaagaaggaggcggagccgctgtttgccgtgcacatccaaaaagagcttgacgacctc
aacggccaatgggagatggtctgcaagcaggcgtatgctaagaagtgtgccctgaagggc
ggtctggacaagacgatggcgctgaggaaggagatgcgggagatgcaggagtggatcaac
caggcggaggaggactacctcgagagagacttcacctacaagacccccgaggagctgcgg
cgggcagtggaggagctcaagcgggcccaggaagaggttcactccaaggcgctgaaggtc
aagctgctgacggacagcgtcaacagcttcatcgccaaggcgccgcctacggcccacgat
gcattgcggtcagagctggacctgctcacggccaactaccagagactctgtagccgcctg
gacgggaagtgtaaaacactggaggaggtttgggcttgctggtgcgagctgctctcctac
ctgcagcaggagaacgacttcctggaccagctggagcagaagctggaggagacggagaac
ctccagggaggcagcagcgaggagctgcaggaggcccttgacggtctggaggccctcctg
cagcacccggaggacaacaggaaccagatccgggagctgtcccagaccctgatcgacgga
ggcgttctcgacgagctgatccagcagaaactggacgccttcaacacgcgctgggacgag
ctcatggcccgcgccgtgcagcggcagaaggagctggacgagggcgcgcggcgggcccag
gagtacgagcgggggctgcgctccatccaggaggcgctggccagcgtggaccgccacctc
tcctcctacctggacgaccaggtggacgcccagcagataccccaggaggcccagaaaatc
cagacagagctgagtggccacgaggaggccctggaggagataaagaagaagaacgaggag
aaggacccctcccataggatcatgggacagatcgacctcacccagaagatgctgggggac
gtgtggaccaagttccgtctgttccagaagccggcgaacttcgacacacgcctggccgac
tgcgagcgcacgctggccggggtcaagggtcaactgggcgtgctcgacgtgcgcagcgtg
gagctggacgtggtgcagtcgcagctggagcaatgcatgaagctgtacaaggtgctgagt
gaggtgaagggggaggtggagacggtgatcaagacgggccggcaggtggtgcagcggcag
cagacggagcagcccaaggagctggacgaccggctcaccgccctgaagctgctctacaac
cagctgggggcccaggtgacggagagcaagctggagctggagaagagcctgaagctgtcc
aagaagctccgcaaggagctcaactccctgacggagtggctggccgccaccgacgcccag
ctcacgcgccgctccgccgtggagggcatgcccagcgacctggaggccgaggtggactgg
gcccagtcggtggcgggggagacgtcccgtcgggagccccagctgcaggcggtgggtgag
ctggcggaggccctgaaggcggtgctgcggggccacggggggctggtggacgataaggtc
agcctgctgcgctgcaactggatcgccgtcacctcgcgggccgaggagtggctcaacctg
ctgctggactaccagcggcagatgcagaagttggatggagcgatagaggaagtgaacaaa
tggatagagggagcagagggaaagatggaccagatggacagcctggggcccaacgacgcc
acgctcaagacgctgcgggctgagctggaggcgacgggctccagggtggaggagctccgg
gctctggcccaggacctcacctccacccggggggaggccttccaccgccaggtgggccag
cggctggagctcctccggcggcgctacgacgccatcgcccgacgcatcggggaggcacag
acggaggcgtcgcccaaggagctggagcactaccacagcgaggctcagatctggttggac
ctcctggaggaggaggcgcagcagggggagaacctgaaggaggaggatttccaggaggac
aaggactttgaggaaggtgcagtgaaggagttattgttgaaaggagagagtttgcagaag
agagttccagacgaggacaagagagagctgatcagacacaagcaagaccagctcaacagc
aagtacaacacagtgaaggacctgcgtgtgatgaggaacaggaaggcgctggccatcgcc
ccccagtggtaccagtacaggaggaagtcacatgacctgctggcctggctggacgacatc
cagcgcagcgtggaccagctgccggaccccccggaggagcagagggtcaaggaaattggc
tcagagttcgaccagaagaaggaggagcttaaggaggtgcagggcttagccaatcagctc
tcagaggcaggagctgccaatctggtggagccccgcctacttcagctgaacacccgctgg
gtggaggttgagggaaagttcttacccttcaaaagacattgtgagtacatgactgagcta
caggtgttgctgcgctcggtgtctgaggcggatttcaagctcaactcccctgaatactgg
cccgccgtgttctacaacctgccccagcaacacacctgcatcaaggaggcgaaggtcagc
atcgaccagctagtagccccggtggacgaggccctgggcaggagggacgagatggtgtcg
ggggcccgccctctggaggcccagaagatccacgacacggccctgctcctcaagaccaac
tgggacaaactcaacaagctgcaccaggataggctgaggcgatgggaggagtccaacaca
aagtggctgaagttctcggcggagcagaaggcgttggaggcgtggctagaggaggcggag
aacacgctgaacctggccgagggcagccccgacacacaccgccagcacctgcgggacctg
acggaggcggtgccggcgaaggaggtggccctgggccgggtgacgtcggcggggaaggag
gtggctcagctcagcacgccggacgacgccggccgcctgctgctggccctcaagagcctc
cacacccgctgggccagcgccctgggacgactggagcagcaccgcagacggtcctcagag
gcccgtagtgcggcggccaccctggaggaggacctgggctccatgcaggcctggctggac
caggccgacggggtgctggccatccccatacaccctgccgagccccagcacatcagggac
accctggtcaaggtccaggcgcgcgtggacgagatccccggtagggcgttggcggtggag
gacctgaaccagaggctgaagcagaaccaggtccccgcggagaaacacgccgacatcagg
gtcatcaactcccgcttcgcccaggtgtccagggatctgcctgagtggcagctggagatg
gagggcctgctgagggacctggagcggctccagggccagctggcggacctctctgcctgg
gcagcacgcgcccgcacccgcctggagagcagcccggaggagctggagcccaagctggtg
gaggaggtgcaggccaaggagccagaggtggagtcattgttggaccgggccaatcagctc
tacaaggacaaccctcccagccaatcagacaaggagaagcatgcccagctgactgaggac
tggtcagtgatactggagctgatgagacagcacagagaacggatggctctactggcggcc
aggaaatcccaacaaaccctactaggaagtggccaagcggagtcggctgcgttggcccag
ttccacaagtcctgggccgagctcactgattggctgagcatgctggacaacatggtgcaa
aacaagcgggtggtggtggctgacctggatgacatcaacagcaacatccaagggctcaag
gcttcccttcaggagatggagcagcgccgccccctgctggagaagcaggtcactgcagcc
cagaacctgaagaacaagaccagcaaccaggagacccgcaacgccatcactgatcgcatc
gagcgtcttcaggcccactgggaggactcccagaccaagctctctgataggacggcgcag
cttcacaacatgctgaaggactccaccgattggctggagtccaggaggaaggtggagcct
ctgatcaaggaggccaatgagaggatggatgccatgacggagatcacgtacacggtggag
gcactgaagaagcagaacaacgaactcaagggtctggctaaggacctgtcggcgtggtgg
gggcaggtggagcagtgtaactcgcaggcagacggtctgctgaggcagtactccgccgac
gacactcacctggtccgacacctgcacgacaccatcaacggcagctggacccacgtcagc
aagagggtgtctgagcgcgagggggctctggagggagccctgcggctgctgcagcagttc
cacctggacctggagaagttcctcaactggctgacggaggccgagaccacgtgcaacgtg
ttggtggacgccaccagccaggagcggctgcaggagcagccccacgccgccaagaacctg
ctggcccagtggaaggacctccaggaggaggtggagggccaggcggagctgtaccactcc
ctggacgagaacggccagcgggtggtctcggcgctggggggctcggaggaggcggggccg
ctgcagcggcggctggacaacatgggccagcgctggaacgacctgcgcagcaagaccatc
agcatgagggcccacctggactctgagatggccccctggaagcgtctccacatgaccctc
caggagctcctcaactggctgagggtcaaaggtcaacagctggaaaaggagccgcctgta
gggggagacgtccccgctgtgcagacccagctcgacacacacaggctcttcagaaaggag
ctgagggccaaggaaccggtgatcagcagatccctaggggacgtgagggtcttcctctct
gaactgcctagagacacaccctcccctgaccatagagacatcagccccgaggagcgggcg
cagaacgtgggccgtgtgctccgcaaggaggcggaggacctgggggcgggctgggagcgg
ctgggcggcgacgcggcggcctggcagcgccgcctggagctggccctccagcggctccag
gagctccaggaggccagggacctgctggagggacagctcaggcaggccgagatggtgaag
gaggcctgggagcccgtgggggacctggtgacggactcgctgcccgagcacatcgagagg
gtgaaggagttccaggaggagatcgccccgatccaggacgacgtcacgcacatgaacgac
ctggcgtccaccttcgccccggccgacatccagctgtcgcctagcaacctggagcgcatc
gaggacctcaacacacgctggaggctgctgcaggttaccatggataccggagatcggagg
accggggagagtgaggtggattcaaagctctcaattaaagatcacctcaagcagctgacg
gatactcacagagactacatgctgcttcatgggtcggttgacagcccctttgagcaaggc
acttcccccaacaatgtgccttactacatcaatgagaaagctgaaccttttgcgatgacc
caggccccccaccagacccagacaacatgctgggaccatcccaagatggccgagctgtac
cagtccctggccgacctgaacaacgtgcgcttctcagcctaccgtacggccatgaagctc
cgccgcctgcagaaggctttgtgcttggacctgctggggatgccggcggcgtgtgaggtg
attgagcagcacggcctgaagcagaacgagcagctgctggacacgcccacgctggtggcc
tgcctgaccagcctgtaccagcagctggaggccacgcacgcccacctagtcagcgtgccg
ctctgcgtcgacatgtgcctcaactggctgctcaacgtttacgacacgggccgcacaggg
aagatcaggacgctgtcgttcaagacggggatcatctctctctgcaaggcccacctcgag
gacaagtacagattcctgttccggcaggtggccagcgccacgggtttctgtgaccagcgg
cgcctgggcttgctgctccacgactccatccagatcccccgccagctgggggaggtggcg
tccttcggaggctccaacatcgagccctccgtccgcagctgcttccagtttgccaacaac
aagccggagctggaggcggccatgttcctggactggatgcgtctggagccccagtccatg
gtgtggctgcccgtcctgcaccgcgtggccgccgccgagacggccaagcaccaggccaag
tgcaacatctgcaaggagtgccccatcatcggcttcaggtaccgcagtctgaaacatttc
aactatgacatctgccagagctgcttcttctcgggccgagttgccaagggccacaagatg
cagtaccccatggtggaatactgcactccgacaacgtccggggaggacgtgagggacttt
gcgaaggtcctgaagaacaagttcaggaccaagcgatacttcgccaagcacccgcgcatg
ggctacctgcctgtccagaccatcctggaaggagacaacatggagactcctgtcactctg
atcaacttctggcccgtagaacatctgcctggctcctccccccagctctcccatgatgac
acgcacactcgcattgagcactacgccagccggttagccgagatggagaaccgtaacggc
acgtatctcaacgacagcatctctcccaatgagagcatagacgacgagcacatgctgatc
cagcactactgccagtctctgagccagggctccccgctgagccagccgcgcagccccgcc
cagatcctcatctccatggagacggaagagaagggggagctggagagggtcctcggcgac
ctggagcaggagaacaggaagctgcagggggagtacgaccggctgaagcgggcgcacgac
cgcaagggcctgtccccgctgccctcgcccccccacatgctgccggcgtcgccccccagc
ccgcgggacgccgagctgctggccgaggccaagctgctgcggcagcacaagggccgcctg
gaggcccgcatgcagatcctggaggaccacaacaaacagctggagtcacagctgcaccgc
ctccgccagctgttggagcagacggactccaaggtgaacggcacagccctgtcctccccc
tccacctcctcccagcgctcagactcttccctccccctgctccgcatggccgccagccag
accaccgacacaatgggagatgatgagctgtccagcccctcccaagatgcatctgggctg
gaagaggttatggagcagctcaacaactccttcccccacagccagggtcccagtgtgggc
agtttgttccacatggccgatgacttaggtcgagccatggagtcattggttaccgtgatg
acagacgagcagaatggggattag
DBGET
integrated database retrieval system
