Gadus morhua (Atlantic cod): 115542261
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Entry
115542261 CDS
T10832
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HECW2-like
KO
K12168
E3 ubiquitin-protein ligase HECW2 [EC:
2.3.2.26
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115542261
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
HECT type E3
115542261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
HECW_N
HECW1_helix
WW
C2
Motif
Other DBs
NCBI-GeneID:
115542261
NCBI-ProteinID:
XP_030210311
LinkDB
All DBs
Position
4:36177899..36208269
Genome browser
AA seq
1633 aa
AA seq
DB search
MAAATAGPAQVAGPPPDAATADGGSARDHLLAVRRRNPHGRPFTLGPENLRSLSVQGSSS
SSSASSLPSSSCSSSSSNREEGAAGLQRANSDTDLVTSESRSSLTASTYQLTLGHAHLVI
SWDIKEEVDATDWIGLYHIDETCVANVWESKNRGVNGTQRGQIVWRLECAPYFMEAETKV
CFRYYHGVSGALRASTPCITIKNPGVLAGAEGQSEAQSGAEQSRKLVSFTLSDMRATGLK
KGMFFNPDPYLKMCIQPGKRSGLPRFSHHGQERRSSIASNTTNPLWRAEKYTFVALMSDM
LEIEVKDKFSKSRPIIKRFLGQLTIPVQRMLEGPAAEEQPASYSLCRRLPTDHVSGQLVF
RVVLTTTGNEESSPRAISAILGASPNGEPGSPSDDEDLPQASASSSVSSSSRGPARGPSP
TGSEDDEVLVNGARCYGDDSVWLVDACGLPAGGEEPGILTLGGHTHRQVSLNDYLDAIEA
PGGPSERPVAAAAAAAVPKLRSSFPTDTRLNAMLHIDSDEDDDPSPPDGKPQQTPTPRAA
PAGLEREAQAGSERAPEGPGQGSTQAAAPSSGTADRSVAVSARGGETSGARAKSGPPARA
GVAAGGGEQGSVGAGLRTASDTRVAVRMVTPAEPSPAEARVPAAVTAATPFSSSRTPAAE
VGVVVPPPPTEGQGPPSEPGPGECECECQHQNRSAASLGIPGRSVLTGLQLSPIQEVDTR
QEVAPKAEEERVESSSSEGLAAMAAPTNNGSAEQGGGACGSNVIEMGARGGRGGGAEESS
ERRLEEGEENGEVWRRRLTTEASGGGAQNQEVGGATAVTLQDGPGEERDAGATAQLNGHL
SVPRSLPSLRHDISRYQRVDEPLPPNWEARIDSHGRVFYVDHVNRTTTWQRPTAPPATQT
LQRSNSIQQMEQLNRRYQSIRRTITNDGRPDNQPANELPADQTDAHPPIPEARRDAAVSQ
TSPRSRLSLLLQSPSAKFLTSPDFFTVLHANPGAYGLFTSNTCLKHMVSKVRRDAHHFER
YQHNRDLVAFLNLFANKTLELPRGWEMKQDHTSKPFFVDHNCRATTFIDPRLPLQSPRPS
SLLAHRQYLTRQRSHSAGEVSPHRLASEEQRHGGAPPVLPRPSSTFSSNSRGQSQEVVPV
AYNEKIVAFLRQPNIYDILQERQPEFGRNHALREKVQLIRADGAPGLARLSGDADLVILL
SLFEEEVMSYIPPHALLHPSYCQSPRGSPVSSPQNSPGTQRANARAPAPYKRDFEAKLRN
FFRKLETKGYGQGPGKLKLIIRRDHLLEDAFNQIMCYSRKDLQRSKLYVSFVGEEGLDYS
GPSREFFFLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHEWFRFSGRILGLALI
HQYLLDAFFTRPFYKGLLRIPCELSDLEFLDEEFHQSLQWMKDNDIEDMLDLTFTVNEEV
FGQITERELKVGGANIAVTEKNKKEYIERTVKWRIERGVVQQTESLVRGFYEVVDARLVS
VFDARELELVIAGTAEIDLSDWRNNTEYRGGYHDNHIVIRWFWAAVERFNNEQRLRLLQF
VTGTSSIPYEGFASLRGSNGPRRFCVEKWGKVTSLPRAHTCFNRLDLPPYPSFSMLYEKM
LTAVEETSTFGLE
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcgacggccggccccgcccaggtggccggccccccgcccgacgcggcgacg
gccgacggcggcagcgcccgggaccacctgctggcggtgcgccggcgcaacccccacggc
cgccccttcacgctggggcccgagaacctgcggagcctctcggtgcagggctcctcctcc
tcttcctccgcctcctccctcccctcctcctcgtgttcgtcgtcgtcgtccaatcgggag
gagggggcggcggggctccagcgggccaacagcgacacggacctggtgacgtcggagagc
cgctcgtcgctcacggcgtccacgtaccagctgaccctgggccacgcccacctggtcatc
tcctgggacatcaaggaggaggtggacgccaccgactggatcggcctctaccacatcgat
gagacgtgcgtggccaacgtgtgggagtccaagaaccgcggcgtgaatggcacccagcga
gggcagatcgtctggaggctggagtgtgcaccctacttcatggaagcggagaccaaggtg
tgcttcaggtactaccacggggtgagcggggccctgagggcctccacaccctgcatcacc
atcaagaaccctggtgtcctggcgggcgccgagggccaatcagaagcccaatcaggggcc
gagcagtcccgcaagttggtcagcttcaccctttcagacatgcgtgccacgggcctgaag
aagggcatgttcttcaacccggacccctacctgaagatgtgcatccagccgggcaagagg
agcggcctgccccggttcagccaccacggccaggagaggcgctcctccatcgcctccaac
accaccaaccccctgtggagggcggagaagtacaccttcgtggccctgatgagcgacatg
ctggagatcgaggtgaaggacaagttctccaagagccgaccaatcatcaagcgtttcctg
ggtcagctgaccatcccggtgcagcgaatgctggaagggcccgcagcggaggagcagcct
gccagctacagcttgtgtcgccgtctccctacggaccacgtcagcggccagctggtgttc
cgggtggtcctcaccaccaccgggaacgaagaatcctccccgcgcgcaatttccgccatc
ttgggggcgtcgcccaacggcgagccgggcagcccctcggacgacgaagacctcccgcag
gcctcggcctcctcctccgtctcctcctcctcccggggcccggcgcgggggccctcgccg
acgggctccgaggacgacgaggtgctggtcaacggcgcccgttgctacggcgacgacagc
gtgtggctcgtggacgcctgcggtttgccggcgggcggcgaggagcccgggatcctgacc
ctgggcggccacacccaccggcaggtgtcgctcaacgactacctggacgccatcgaggcc
cccgggggcccctcggagcggcccgtggcggcggcggcggcggcggcggtgcccaagctg
cgctccagcttccccacggacacgcggctcaatgccatgctgcacatcgactcggacgaa
gatgacgacccctcgccgcccgacggcaaaccgcagcaaacgccgacccccagagcggcc
ccggccggcctggaacgagaggcgcaggcggggagcgagagggccccagagggcccgggt
caggggtccacgcaggccgccgccccctcgagcggcactgcagaccggagcgtggcggtg
tcagcgaggggtggcgaaacctccggtgctagagccaaatcgggccccccggcccgggcc
ggggtcgccgcggggggaggggaacagggtagtgtgggggcggggcttaggacagcatcg
gacacgagggtcgccgtgcgtatggtgacccccgccgagccttcccccgccgaggcacgc
gtccccgccgccgttaccgcggcgacgcccttctcgtcgtcccgtacgccggcagcggag
gtgggggtggttgttcctcctcctcctacggagggacaggggccgccgtcggagcccggc
cccggggagtgcgagtgtgagtgccagcaccagaacaggagcgccgccagcctggggatc
ccgggccgctcggtgctcacgggcctccagctgtcgcccattcaggaggtggacaccaga
caggaagtggctcccaaagcggaggaggagagggtggagtcatcgagcagtgagggcttg
gccgccatggccgcccccaccaataacggatcagcagaacaagggggcggggcttgtgga
tctaacgtaattgaaatgggagccagaggcggacgaggaggaggagctgaagagagcagc
gagcggaggctggaggagggggaggagaacggggaggtctggaggaggaggctcaccacg
gaggcctccgggggcggggcccagaaccaggaagtgggcggggccacggcggtgaccctg
caggacgggccgggcgaggagagggatgcaggcgctacagctcagctcaacggccacctg
tctgttcctcgctccctgccgtccctgcgtcacgacatcagccgctaccagcgcgtggac
gagcccctcccacccaactgggaggcccgcatcgacagccatggccgggtgttctacgtg
gaccacgtgaaccggaccaccacctggcagcggcctaccgccccccccgccacacagacc
ctgcagaggtccaactccatccagcagatggagcaactcaaccgccggtatcagagcatc
cgcaggacgataaccaatgacggcaggccagacaatcagccggccaatgagcttccagcc
gatcagacggacgcacaccctcctatcccagaagcgcgtcgggacgcggcggtctcccag
accagtccccggtctcgcctcagcctgctgctccagtctcccagcgccaagttcctcacc
agccccgacttcttcaccgtgctgcacgccaaccctggtgcgtacggcctgttcacctcc
aacacgtgtctgaagcacatggtgagcaaagtgcggcgcgacgcgcaccactttgagcgc
taccagcacaaccgcgacctggtggccttcctcaacctgttcgccaacaagacgctggag
ctgccccgtggctgggagatgaagcaggaccacacctccaagcctttcttcgtggaccac
aactgccgggcgaccactttcatagacccccggctgcccctccagagcccccggccctcc
agcctgctggcccaccgccagtacctgacccgccagcgcagccacagcgctggggaggtc
agcccccaccggctggcttcagaggagcagcgtcatggcggggcccctcccgtcctcccc
cggccctccagcaccttcagctccaacagcaggggccagagccaggaggtggtaccggtc
gcgtacaacgagaagatcgtggcgttcctacggcaacccaacatctacgacatcctccag
gagagacagccggagtttggccgcaaccacgccctcagggagaaggtgcagctgatccgt
gctgatggcgcgccgggattggccaggctctcgggcgatgccgacctcgtcatcctgctg
agtttgtttgaagaggaagtgatgtcgtacatccctccgcacgccctgctgcaccccagc
tactgccagtcaccgcgggggtctcccgtgtcctcccctcagaactcccccggaacccag
agggccaacgcgagggccccggccccctacaagagagactttgaggccaagctgaggaac
ttcttcaggaagctggagaccaagggctacggccaggggcctgggaaactcaagctgatc
atccggcgagaccacctcctggaagacgccttcaaccagatcatgtgttactcccgcaag
gacctgcagcgcagcaagctctacgtcagcttcgttggagaggaggggcttgactacagc
ggcccttccagagagttcttcttcctggtttccagagagctcttcaacccttattatggg
ctgtttgagtactcggccaacgacacctacaccgtgcagatcagcccaatgtcggccttc
gtggacaaccaccacgagtggttccggttcagcggtcggatcctgggtctggctctgatc
caccagtacctgctggacgccttcttcaccaggcccttctacaaaggactgctgcgcatc
ccgtgcgagctgagcgacctggagttcctggacgaggagttccaccagtctctgcagtgg
atgaaggacaacgacatcgaggacatgctggacctcaccttcaccgtcaacgaggaggtc
ttcgggcagatcacggagcgggagctgaaggtgggcggggccaacatcgccgtgacggag
aagaacaagaaggagtacatcgagcggacggtgaagtggaggatcgagaggggcgtggtc
cagcagacggagagtctggtccgcggcttctacgaggtggtggatgcgcggctggtgtcc
gtgttcgatgcccgcgagctggagctggtgatcgcagggacggcggagatcgacctgtcg
gactggaggaacaacacggagtacagaggaggttaccacgacaaccacatcgtgatccgc
tggttctgggcggcggttgagaggttcaacaacgagcagcgactgaggctgctgcagttt
gtgacgggtacgtccagtatcccgtacgagggctttgcgtctctgcgcggcagcaacgga
ccgcgcaggttctgtgtggagaagtgggggaaggtcacctccctgcccagggctcatact
tgcttcaacagactggacctgcctccatacccgtctttctccatgttgtacgagaagatg
ctcacagctgtggaggagaccagcacctttggactcgagtag
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integrated database retrieval system
