Gadus morhua (Atlantic cod): 115542441
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Entry
115542441 CDS
T10832
Symbol
stab2
Name
(RefSeq) stabilin-2
KO
K19013
stabilin-2
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04148
Efferocytosis
Brite
Glycosaminoglycan binding proteins [BR:
gmh00536
]
Hyaluronan
Cell surface receptors
115542441 (stab2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115542441
NCBI-ProteinID:
XP_030210532
LinkDB
All DBs
Position
4:7681097..7723086
Genome browser
AA seq
2543 aa
AA seq
DB search
MMTGSSWSSRGPLLMLLLQLGLQTTASADAPQGFCPFQRRLSTRTRCVDSQLGLFYQSCP
SGYKIERAQGSKHTTVFTSLSGCSKECYRDVEEQRCCPGYWGPDCMECPERAERPCNAKG
VCSDGMGGNGTCSCQDGFAGTACEDCSPNRYGQDCRSECRCVHGVCNSGMRQDGSCTCFS
GYKGPACDQELPDCAALSCGLNSVCREEAASGLLGCQCAVGHQQSGDKCISINPCLQRPC
HALAACAHTGPAQHVCACPVGHEGDGRVCSPVDPCQKDQAGCSAQTTRCVYDGPGASHCE
CLPGFHELDHALRCHLKDACTPDACHEKANCTTIKPGVTQCTCPEGYRGNGKVCYGNIMQ
RLRDLNTEPGGQWTGQLTEALTLFGSVSWPLEKLGPFTVFVPINRAFRYSPSKSLVVDAV
KAKYLCKLHMAAGTIRRDGLKRTGVYYTLTGKAGEVDSASKAALSRIRLRGSRTKAAIVE
PDVLASNGMIHLVNKLIENIPPTVDSDTQENLMKVISDYGKFSKFKSLLERANLSPLMDS
PGPHTVFIPTNNAFSAMEEGQLEYLTTDEGHGKLVELVRNHVVESSRLEVYNVVSGPRAS
SMANQVLLFNVSENGRVSVNGMAVLEADVETRNGQLYSLDGVLIPASILPILPHRCDVSE
TRLVEGKCGSCSRPSLLQCPSGDNLVLTFGCLYQFNLMSRNNMTLGIRGCAPRCNTTTVR
RACCPGFYSADCRPCPGGFQNPCSGHGQCMEGLAGNGTCICRPGFRGSRCHYCTLSNKCG
PGCSRTCPCLQGTCDNRPDSDGRCRPDSCLPGYTGAHCERHTQACGPNVHFCHANADCDF
SQGPAQCVCKPGYQGDGIMCVERDPCAAPSRGGCGSNAKCIKTGPKTHVCQCLKGWAMDQ
DECQPINDCNGPGRGGCHGNASCIYIGPGQSDCMCKTGYQGNGIDCEPANLCVFQNGRGC
HFQATCQFVSGQWGCVCEDGYAGDGEVCYGTVDQELIAIPDALEFLSWVTAADLGQSLSE
QNLTLLVPTSAAIQSLAADDKSFWTTKGNLPSMIRNHVIQGIYTLSGLMASTSPVTSLLN
TSLSVGETSQAVTIGGAAITLANVAATNGLIHVIDKVLVPERTHSQGLLELLRPKFSLFR
AALIQHNLTDEIELAEEYTIFAPTDSAVRDYLRTTSANVLDVNTTRYHVLLHERLLKTEL
QAAGYKKTMLGFSYLLAIFPRDGKLLVNSAQLNVSNLLTAKGVVHGLASVLEINRNRCDT
VRVVDVVKTHCVNCYTRPRCPLGYTHQNTMERHCGVRAKFPGHSWQFYDCESACERTVDV
PRCCAGFFGRYCEPCPGYDGQVCAGQGACDDGTKGTGRCTCLQFFNGTACESCVAGKYGV
HCDQDCLCQSGRCMDGPLGDGTCVCEVGWKGIHCDEKVDSGADELCGAAKCHTSANCITK
MSQMQCVCAAGFEGNGTDCRAIDPCSGANGHCSPHALCKRTQPGRRDCLCLPGYQGDGLV
CVEIDACAQGTVHCHTNADCIHSGPNKTVCVCQQGYSGDGQVCEMIDLCRKGNGQCHSRA
KCNTTAPGVRTCTCRPGWMGDGAYCKGTLREELLREGSLSFLINMMRYLPQFRLNGRGPF
TIFAPNGLTSAAGFKAMKALWGGGVRDRLGYILQSHIVMGHLLTASDLAVPRNLTSLSGE
VLTTGGSQGNILINEANVTLSGTACVNGIIHEIDSFLVSPSVERGSHTASPLNLTDVAAR
NGYTSFYKLMEETGVMDGLGDVPPVTVFLPSDRAWSSLSQQQRDFLYDPHNREQLLEYIR
YHVVPSRQVFSLDLGLMESARSLQGSHLRFSRGGLDAIGALFINEGKCRVVQRNMAFKDG
VAHGIDCLLTPPSLGGRCDERTSFEVEMSCSVCLRASSECPSGSKKKGHQPCDLPMLSYQ
KNSGCQPTCIFNQWQPKCCAGYYGRDCQACPGGAGSVCSNHGDCDAGHLGNGTCSCHDGF
GGTACELCDDGRFGPACQACNCSQRGVCLDGRRGSGACFCEEGWTGAHCEVQQAAAPVCA
PPCSPQGVCQDNNTCMCAPFYQGNGSTCTLVDLCAAGNGGCAAGARCRQTGVKVGCVCPA
GHSGDGFYCQPVDPCSLTDNGGCHEHATCTMTGPGKKKCACKNNYIGDGVKCEVKELPIN
RCLQDNGACHLDGECTDLHFEDATVGVFHLRSDKGPYKLTYAGAAAACGGEGAGLASYKQ
LSYAQQAGLNLCSAGWLTEARVAYPTTFSNPNCGFGHVGIVDYGTRKNLSETWDTFCYRV
KEVSCACKPGYVGDGYSCSGNLLQVLQSTPDFSNFYTQILNYSRSSRSGKEFVSRLSDLS
TKNTLFVPDNSGLLENQTLTERDMEHHLSEGEALALSQMKNGSRLRTRQGSLTIQGLVDF
MNPDTLSSCYVNERFIIDSDIVASNGVIHVIAGPLKAPPAPHKPLHVGHKAGMGVGLVLL
LALVAAVLVVGYRFHAHRATPFKFSYFKDEGEQEEDSAPTPRHSNIINPIFDTSPPAELL
PPSAAEEDSQQGVSNVCYDIIKA
NT seq
7632 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgggttcctcctggtccagccgggggcccctcctgatgctgctgctgcagctg
ggcctccagactacagcctctgcagacgcccctcagggtttctgtcccttccagagacgt
ctgagtactaggacccggtgcgtggacagccaattgggcttattctaccagtcatgcccc
tccggctacaaaatcgagagggcgcagggcagcaaacacactactgtcttcacttctctg
tcgggctgctctaaggagtgttaccgggacgtggaggagcagaggtgctgtcccgggtac
tggggcccggactgcatggagtgtcctgagcgggctgagcggccgtgtaacgccaaagga
gtctgctctgacggcatggggggaaatggaacctgtagttgtcaggatggatttgcagga
actgcctgtgaggactgctcacccaacagatacggtcaggactgtcgctcagagtgcagg
tgtgtgcacggcgtgtgtaacagcggtatgcggcaggacgggtcgtgcacctgcttctca
gggtacaaaggccccgcctgcgaccaagagctccctgactgcgcggcgctgagctgtggg
ctgaactccgtctgcagggaggaggctgcatcgggcctgctgggctgccagtgcgccgtc
ggccaccagcagtcaggggacaagtgcatctccatcaacccctgcctgcagcggccgtgc
cacgccctggccgcctgcgcccacaccggccccgcccagcacgtctgcgcctgtcccgtt
ggccacgagggcgacgggcgcgtctgctcccccgtggacccctgccagaaggaccaagcc
ggctgctccgcccagaccacccgctgtgtgtacgacgggcccggggcctcccactgcgag
tgtctacctgggttccatgagctcgaccacgccctccgctgccacctgaaggacgcctgc
acaccagacgcctgccacgagaaggccaactgcaccacgatcaaacccggagtcactcag
tgcacctgccctgagggttaccgtggcaacggcaaagtgtgctacggcaacatcatgcag
cgtctgagggacctgaacacagagcccggtggccagtggacgggccagctgaccgaagcc
ctgacgctctttgggtcggtctcctggccgctggagaagctgggccccttcaccgtgttc
gtcccgatcaacagagcattccggtacagtccgagcaagtccctcgtggtggacgcggtg
aaggcgaagtacctgtgtaagctgcacatggccgcgggtaccatacgccgggacggcctg
aagaggacgggcgtgtactacacgctgaccgggaaggccggggaggtcgacagcgccagc
aaggcggctctgagtaggatccgactccgcggcagcaggacgaaggcggcgatcgtggag
cccgacgtactcgcgtccaacgggatgatccacctggtcaacaaactgatcgagaacatt
ccgcccaccgtggacagcgatacgcaggagaatctgatgaaggttatttccgactatgga
aagttttccaagttcaagagtttattagagagagccaacctgtcccccctcatggactcc
cctggtccccacaccgtgttcataccaaccaacaacgccttcagtgccatggaggaggga
cagctagagtacctcaccactgatgagggccacggcaagttagtggagctggtgcggaac
cacgtggtggagtcctcaaggctcgaggtctacaacgtggtgtccggccccagagcttcc
tccatggccaatcaggttctgttattcaacgtgtcggagaacggccgggtctcggtgaac
gggatggctgtcctggaggcggacgtggagaccaggaacggccagctgtactccctggac
ggggtgctgatcccagcctccatcctgcctattctcccccaccgctgtgacgtgtcggag
accaggctggtggagggcaagtgtgggagctgcagcagaccatctcttttacaatgtccg
tctggagataacttggttttgaccttcggctgcctctaccaattcaacctcatgtcgagg
aacaatatgacactcggcataagaggctgcgctccgcgctgcaacaccaccaccgtccgg
cgggcctgctgtccggggttctactcagcagactgccgtccctgtccaggaggcttccag
aacccctgctccggacacggccagtgcatggagggtctggcgggtaacgggacgtgtatc
tgcaggccgggcttcagagggtcccgctgtcactactgcaccctctcaaacaagtgcggc
ccgggctgcagcagaacctgcccctgcctccagggtacctgtgacaaccggcccgactcc
gacggccgctgccgcccggactcctgcctgcccggctacacgggggcccactgcgagaga
cacacgcaggcctgcggtcccaacgtccacttctgccacgccaacgccgactgtgacttc
agccaggggccggcccagtgtgtctgcaagcccggttaccagggcgacgggatcatgtgt
gtggaacgagacccgtgtgccgccccatcaagaggaggctgcggcagtaatgcgaagtgc
ataaagacgggccccaaaacacacgtctgccagtgtctgaagggctgggccatggaccag
gacgagtgccagccaatcaatgactgcaacggccctggcagaggaggttgccacggaaat
gcctcctgcatctacatcggtcccggccagagtgactgcatgtgtaagacgggttaccaa
ggaaacggcatagactgtgaaccggccaacctgtgtgtattccagaatggacgaggttgt
cattttcaagccacatgccagtttgtctctggccagtggggatgtgtctgtgaggatgga
tacgctggcgacggagaagtttgctacggcacggtggaccaggagctgatcgctattcca
gacgcattagagttcctctcatgggtgacagctgcggatctgggccagtctctgtcggag
cagaacctcaccctcctggtgcccacctccgcagccatccagagcctggctgcagacgac
aagagcttctggaccaccaagggaaaccttcctagcatgatccggaaccacgtgatccag
gggatttacacgctgtctggcctcatggcgtccacctcgccggtcacctccctcctcaac
acctccctctctgtgggcgagacctcccaggctgtgaccatagggggggcggccatcaca
ctggccaacgtggccgccaccaacggactgatccacgtcatcgataaggttctagtcccg
gagaggacacacagccagggactcctggagctgttgagacccaagttctccctgttccgg
gccgccctcatccaacacaatctgacggatgagatcgagctggcggaggagtacaccatc
ttcgccccgacagacagcgctgtgagagactacctgcgcacaacgtctgccaatgtcctg
gatgtgaacaccacacgctaccacgtcctgctccatgagcggctcctgaagacagagctg
caggccgcagggtataagaagactatgctggggttctcctacctgctggccatcttcccc
agagatggaaagctgctggtgaacagcgcccagctgaacgtgtccaacctcctgacggct
aaaggcgtggtccacggcctcgcctcggtgttggagatcaaccggaaccgctgcgacacc
gtgcgcgtcgtggacgtggtgaagacccactgcgtgaactgttatacccggccccggtgc
cccctcggatacacccaccagaacacaatggagaggcactgcggtgtgcgggcgaaattt
ccaggtcactcctggcagttctacgactgcgagagcgcctgtgagagaaccgtggatgtg
ccgcgctgctgcgccgggttctttgggcggtactgtgagccgtgtcccgggtacgacggc
caagtctgcgcgggtcagggggcgtgcgatgacgggaccaaaggaaccgggcgctgcacc
tgccttcagttcttcaacggaaccgcgtgtgaatcctgtgtcgcagggaagtacggggtt
cactgtgaccaagactgcttgtgtcagagcggccgatgcatggacgggcccctgggggac
gggacctgcgtgtgcgaggtcgggtggaagggaatccactgtgacgaaaaggtggactcc
ggcgctgacgagctgtgtggagcggccaagtgccataccagtgcaaattgtatcaccaag
atgtcccagatgcagtgtgtctgtgctgctgggtttgagggcaacggtactgactgcaga
gcgatagacccctgcagcggggccaacggtcactgcagcccccatgcgctgtgcaagcgg
acccagccaggccggagggactgcctgtgtctgcccgggtaccagggggacggtcttgtc
tgcgtggagatcgacgcgtgtgcccaaggaaccgtccactgccacacgaacgcagactgt
attcactctggacccaacaagacggtgtgcgtgtgtcagcagggttactcgggagatgga
caggtttgcgagatgattgacctgtgtcgcaagggaaacggacagtgccattccagggcc
aagtgtaacaccaccgctcccggcgttcgaacctgcacctgtcgccctggctggatggga
gacggagcctactgcaaaggaaccctcagagaggagctgctcagagagggctccctttcg
ttcctcataaacatgatgaggtacttgccccagttccgactgaacggccgcggccccttc
accatcttcgcccccaacggactgacgtccgccgctggattcaaagcaatgaaagctctg
tggggcggaggggtgcgtgacaggttgggctacatcctccagagccacatagtcatgggc
cacctgctcaccgcaagcgacctcgccgtgcccaggaacctcacctcgctgtcaggggag
gttctgaccaccggggggtctcagggaaacatcctgatcaacgaagctaacgtgaccctc
agcggcacggcctgtgtcaacggcatcatccacgagatcgactccttcctggtctcaccc
agcgtggagagagggagccacacggcctcacccctgaacctgacggatgtggcggcgcgt
aacggatacacgagcttctacaagctgatggaggagacgggcgtgatggacggcctgggc
gacgtcccccccgtcacagtcttcctgccctccgaccgggcgtggtcctccctgtcccag
cagcaaagggacttcctgtacgacccgcacaacagagaacagctgctggagtatatccgg
taccacgtggtgccctccagacaggtgttctctctagatctgggtctcatggagtcggcc
cgtagcctgcagggatcgcatctccgcttcagccgcggcggactggacgccatcggggcg
ctcttcatcaacgaggggaagtgtcgcgtggtccagaggaacatggccttcaaggacggg
gtggcgcacggcatcgactgcctgctcacgccgcccagcctggggggccgctgcgacgag
cggaccagcttcgaggtcgagatgagctgttccgtttgcctgcgtgcctcgtccgagtgt
ccgagcggatccaaaaagaagggccaccagccgtgcgacctgcccatgctgtcctaccag
aaaaactctggctgccagcccacctgcatcttcaaccaatggcagcccaaatgctgcgcg
ggctactatgggcgggactgccaggcttgcccggggggagcagggtccgtctgcagtaac
cacggcgactgtgacgccggtcacctcggcaacggcacctgcagctgccacgacgggttc
gggggcacggcgtgcgagctgtgcgacgacgggcgcttcgggccggcctgccaggcctgt
aactgctctcagcggggggtgtgtctggacgggcggcggggcagcggcgcgtgtttctgt
gaggagggctggaccggggcccactgcgaggtgcagcaagccgcggccccggtctgcgcc
ccgccctgctccccacagggggtctgccaggacaacaacacctgcatgtgcgcgcccttc
taccagggaaacggatccacatgcacactggtggacctgtgtgctgcggggaacggcggc
tgcgctgcgggggcgcgctgccggcagacgggggtgaaggtggggtgtgtctgcccagcg
gggcacagcggggacggcttctactgccagcccgtcgacccctgctccctgacggacaac
gggggctgccacgagcacgccacctgcaccatgaccggcccgggcaagaagaagtgcgcc
tgtaagaacaactacattggtgacggggtcaagtgtgaggtcaaggagctgccaatcaac
cgctgtctccaagacaacggcgcgtgccacctggacggggagtgcacggacctccacttt
gaggacgccacggtgggggtgttccacctgcgctccgataagggcccctacaagctgacc
tacgccggcgcggcggcggcctgcgggggggagggggccggcctcgcctcctacaaacag
ctgtcctacgcccagcaggcgggcctcaacctgtgctctgcgggctggctgacggaggcc
cgggtggcgtaccccaccaccttctccaaccccaactgtggcttcggtcacgtgggcatc
gtggactacggcacccgcaagaacctgagtgagacctgggacaccttctgctaccgagtc
aaagaggtgtcgtgtgcgtgtaaacccgggtacgtgggcgacggttactcctgctcaggg
aacctcctccaggtcctacagtccacaccggacttctccaacttctatacccaaatcctg
aactactcccggagctcccggtccgggaaggagtttgtgtcgcggctgagtgacctgagc
accaagaatactctgtttgtaccggacaactcgggcctgctggagaaccagacgctgacg
gagagggacatggagcaccacctgtcggagggcgaggcgctggccctcagccagatgaag
aacggcagccggctgagaacccgccagggcagcctgaccatccaggggctggtggacttc
atgaaccccgacacactgtcctcctgctacgtcaacgaacgcttcatcatcgactctgac
atcgtggcgtctaacggggtcatccacgtgatcgcggggcccctgaaggcccccccagcg
ccccacaaaccgctccatgtgggacacaaggccgggatgggggtgggactcgtgctgctg
ctggcgctggtggcggcggtcctcgtggtgggataccgcttccacgcgcacagagccaca
cccttcaagttcagctacttcaaggatgaaggtgagcaagaggaagactccgcccctacg
ccccgccactccaacatcatcaaccccatcttcgacacgtcgccccccgcagagctgttg
cctcccagtgccgccgaggaggactcgcagcagggggtgagcaacgtttgctacgacatc
attaaggcctga
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