Gadus morhua (Atlantic cod): 115542450
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Entry
115542450 CDS
T10832
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmh03019
]
115542450 (caprin2)
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
115542450 (caprin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
BclA_C
Motif
Other DBs
NCBI-GeneID:
115542450
NCBI-ProteinID:
XP_030210560
Ensembl:
ENSGMOG00000023874
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All DBs
Position
4:complement(7554380..7565140)
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AA seq
987 aa
AA seq
DB search
MVQLSPSPTRLVGSAAGCPVVGDPPETYSPKTGSPGGLSPLHLHLEVSTAYQGYDNYIED
GLICLKHKIRNMDKRKLKLEHYMKWVENGGTLNKDQMDAVGQYQELIHNLAFAQEMHCSL
DVLTQSLLRAQKKAAKKEQQERVEEERRRLSTVLRFQHLLASLQQEQIQGDLLEGRGPAP
RVSPQRLDSLTQLSGLLGLGQRDSPLSVAKQMEKAALLYFDLLEAKHTPVAGSTFKDLKE
QLTSFLDCEYFKVLRPLPPPSRAPVVIPSPPIHTIISQPKTKETPKSKPVSRPRITVTPT
APPPPPPPNLKAEFLAMKEREPPDSWDVEFLSDRPLTPKPSKGAATFIPRGAEPKPLPIR
PKRKKGKKAKGSQSVKLAAIVVAPLEVFNSQAVLPNDPVLRKQQLEVLLHKIHGSFSFMQ
ESHLDPEGFPIDGHARLGCRASGSPSLLGSSHTLECPSDSVSHLSHSLTPFSATEAKQEV
IKNPIELIKSPIELIKSPIELIKSPIEVIKSPIEVLPEIMQSTPLPARRLERRASLTNGE
QALNLCDLSFPARDVSNESLQLDVQPLVSPPLVSPTLVSPPLYRCDSVNSVSPENRSLPR
TPVMDSGKQSPCNGVSSPSVTPQGHSFSTPPARRALIADQFQSVFKVTGSESPTGELGYE
TETSYNTASTQTPPEFAPSDDEPQSAYQSDYPVDGGGQVFLSPSQPSAGRAYHGRGYARG
TPRGSKGPTYSSRSPWWLRGPAFVQGVPHRDPGPLLYGARESVFQHGYRRGGAARHNSSG
WSDSSQVSSPDRDGVYPLLDSGHGDSLSVSTLEVPVTPHHHHHHHPQQQHHPQPHTHPQH
QPTLLPVPMYPLTQPIRVAFTASRTANFAPGNLDQTVVFDQLHTNVGETYDARVGRFTCP
VAGAYVFLFHILKLAINVPLYVNLMCNDEVMVSAYANDGAPDHETASNHAILPLYPGDQV
WLRLHRGAIYGSTWKYSTFSGFLLYQD
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctgtctccctccccgacccggctcgtcggctccgcggccgggtgtcccgta
gtgggggaccccccggagacctacagcccgaagacgggctctcccggtggccttagcccc
ctccacctccacctggaggtgtccaccgcctaccagggatacgacaactacatagaggac
gggctcatctgcctcaaacacaagatccgcaatatggacaagagaaagctgaaactagaa
cactacatgaagtgggtggagaacggaggcactctgaacaaggaccagatggatgcagtg
gggcagtaccaggagctgattcacaacctggcgtttgctcaggagatgcactgcagtctg
gacgtcctgacccagagcctcctccgggcccagaagaaggctgccaagaaggagcagcag
gagagggtggaggaggagaggaggcggctgagcacggtgctccgcttccagcacctcctg
gccagcctccagcaggagcagatccagggagacctgctggaggggcgcgggccggccccc
cgggtctccccccagcggctggacagcctcacccagctctctggcctcctggggctgggc
cagagagattccccgctgagcgtggccaaacagatggagaaggctgcgctgctgtacttt
gacctgctggaggcaaagcacacgccagtggccggttctacctttaaagacctgaaggag
cagctcacctcgttcctggactgcgagtacttcaaggttctgcgtccacttccgccgccc
agcagggctccagtcgttattcccagccctcccatccacaccatcatatcgcagccaaaa
acaaaggaaacgcctaaaagcaagccggtcagcaggccgcggatcaccgtcacaccgacc
gctcccccccccccgccaccccccaacctgaaggcggagttcctggccatgaaggagcgt
gagcccccggactcctgggacgtggagttcctgtcggaccgacccttgacccccaagccc
tcaaagggcgcggccaccttcatccccagaggagcggagcccaaacccctgcccatcaga
cccaaacggaagaaagggaagaaagccaaaggatcccagagtgtcaaactggctgccatc
gtggtcgcccccttagaggtgttcaactctcaggcggtcctgcccaacgacccggttctc
aggaaacaacaattggaagtcctgttgcacaaaatccacggctccttcagtttcatgcag
gagtctcatctggatcccgaggggttccccatcgatggacacgctcgcctgggctgcaga
gcgtccggttctccctctcttcttggtagctcacacacgcttgaatgtccgtcggattca
gtttcccatttgtcacactctttgacaccgttttccgctacagaagcgaagcaggaggtg
attaaaaaccctattgagctgattaaaagcccgatagagctgattaaaagcccgatagag
ctgattaaaagcccgatagaggtgattaaaagcccgatagaggttcttccagaaattatg
cagtccactcccctgcctgccagacgcttagagcgcagagccagtttgaccaatggagag
caggctctgaacttatgtgacctaagtttccctgcaagagatgtttctaacgagtctctg
cagctggacgtccagcccctggtctctcctccgctggtctctccaaccctggtctctcct
ccactgtaccggtgcgactcggtcaactccgtctcccccgagaaccgcagtctcccacgg
acgccggtgatggactcggggaaacagtccccctgtaacggggtgtcctccccctctgtg
accccccagggtcactcgttctccacgccaccggcccgccgtgccctgatcgctgaccag
ttccagtcggttttcaaggtaaccggatctgagtctccgaccggggagttgggctacgaa
acggagaccagctacaacacggccagcacccagacgcccccagagttcgccccctcagac
gacgagccccagtccgcgtaccagtcggactacccggtggacggcggtggtcaggtattt
ctgtcccccagccagcccagcgccgggcgggcgtaccacggcagaggctacgcacgaggt
acgccgcgggggagcaagggccccacttactcctctcgctctccctggtggctgcgagga
ccggccttcgttcagggggttccccacagagatcccggacccctgctgtatggagccagg
gagtctgttttccagcacggctacaggcgaggaggggcggccagacacaactccagcggt
tggagcgactcctcgcaggtgagcagccccgaccgcgacggggtgtaccccctgttggac
tcgggacacggcgactccctgtccgtctccaccctggaggttccggtcacgccccatcac
caccaccaccaccacccccagcagcagcaccatccccaaccccacacccacccccagcac
cagccgaccctgctgcccgtgccgatgtacccgttgacccagccgatccgcgtggccttc
accgcctcccgcacggccaacttcgccccggggaacctggaccagaccgtggtgttcgac
cagctgcacaccaacgtgggcgagacgtacgacgcccgcgtgggccgcttcacctgcccg
gtggcgggcgcctacgtcttcctcttccacatcctgaagctggccatcaacgtgccgctc
tacgtcaacctcatgtgcaacgacgaggtgatggtgtcggcgtacgccaacgacggcgcg
ccggaccacgagacggccagcaaccacgccatcctgccgctgtaccccggggaccaggtg
tggctgcggctgcaccgcggggccatctacggaagcacctggaagtacagcaccttctcg
gggttcctgctctaccaggactga
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