Gadus morhua (Atlantic cod): 115542485
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Entry
115542485 CDS
T10832
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmh03041
]
115542485 (dhx35)
Enzymes [BR:
gmh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115542485 (dhx35)
Spliceosome [BR:
gmh03041
]
Complex C
Other components
Complex C specific factors
115542485 (dhx35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
ABC_tran
AAA_19
nSTAND3
Cas3-like_C_2
AAA_7
AAA_30
AAA_23
Motif
Other DBs
NCBI-GeneID:
115542485
NCBI-ProteinID:
XP_030210619
Ensembl:
ENSGMOG00000003036
LinkDB
All DBs
Position
1:complement(13123271..13132447)
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AA seq
699 aa
AA seq
DB search
MATPLSTMKFWKPGSEAPGITEERELTSETTGSPVIFNPHTALSIEKQRQKLPVFKHRNN
VLYLVESYQTVIIVGETGCGKTTQIPQYLLEAGWAAEGRVIGVTQPRRVAAISVANRVAE
ERGALLGHEVGYTIRFDDCSDPQATRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHERT
LYTDIAIGLLKKIQKKRRDLRLIVASATLDAKKFQEFFNLNETADPNKDTCGILTVEGRT
FPVDMFYTISPVPDYVKATVETVMKIHETEDDGDVLAFLTGQEEVEKVVSLLQEQARSLS
RYGMKKYLRVMPMYAGLPYAEQMKVFERAPPTVRKVIVATNIAETSITINGIVFVIDCAF
VKLRAYNPSTAIESLVVSPISKASASQRAGRAGRNRSGKCFRLYTEEDYEKLPASTVPEM
QRTNLAPVILQLKALGIDNVLRFSFLSPPPAQSMIQALELLYALGGLDQYGRLTDPMGVR
MAEFPLSPMFAKMLLEAGNYGCSKEIVTIAAMMQIQNIFVVPSNQKKVAAREHRKFAVAE
GDHLTMLNVYEAFIKHQKSSQWCQEHFLNYKGLLRAITVREQLRRLMNKFKVPRTSSEGD
PDVILRCIVAGFFANAARIHHSGSYRTLRDDRELHIHPSSVLYGEKPPKWVVYNEVVQTA
KYYMRDVTAVESTWLVELAPHFYKQAQHGSLASKRSRVL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcccctctccacgatgaaattttggaagccgggatcagaggcaccagggatc
acagaggagcgggagctcacgtctgagaccaccggttccccagtcatattcaacccgcat
actgctctctccatagaaaagcaacgacagaaactccctgtctttaagcacagaaacaac
gtattgtacttggtggagagctaccagacagtaatcatcgtcggtgagacaggatgtgga
aaaaccacacaaattcctcagtacctcctggaggctggctgggcagcggagggaagagtc
atcggagtgacacagccccgccgcgtcgcagccatttctgtggctaatcgtgttgcagaa
gagaggggggccctcctgggacacgaggtgggatacaccatccgatttgatgactgctct
gatccccaagctaccagaatcaagtttctaacagatggcatgctggtccgtgagatgatg
gctgatcctcttctgaaaaaatacagcgtgttgatgttggacgaggcccacgagagaacc
ctttacacggacatcgccattggattactgaagaagattcagaagaagcggcgagacctg
agactgatcgtcgcctctgccacactggatgccaagaaattccaagagttcttcaacctg
aacgagaccgcagatcctaacaaggacacgtgtggtatactcacagtagaaggtcgcacg
ttccctgtggacatgttctacaccatcagtcctgtaccagactatgtgaaggccacggtg
gaaactgtgatgaagatccatgaaacagaagatgatggagatgttcttgcttttctcact
gggcaggaagaggtggagaaggtggtttctctgctccaggaacaggctcgctctctgtca
cgttacggcatgaagaaatatctgcgggtgatgcccatgtacgctggactgccatacgct
gagcagatgaaggtctttgagagggcaccacccactgtccgcaaggtgattgtggccacc
aacatagcggagacctccatcactatcaacggcattgtgtttgtaattgactgtgcattc
gtgaagttgagagcctacaacccttccactgccatcgagtccctggtggtcagtcccata
tctaaggcctcggccagccagagggctggaagggctggccgcaaccgctctgggaaatgc
ttccgactatacacagaggaggactatgagaagctgccagcctctactgtgccagagatg
cagcgcactaatctggcccccgtcatactgcagctcaaagccctcggtatcgacaacgtg
ctgcgcttcagcttcctctctcctcctccagctcagtccatgatccaagcgcttgaactg
ctctacgctctcggaggtctggaccagtatggacgtctgactgaccctatgggggtacgg
atggcagagttcccattgagccccatgtttgccaagatgcttttggaggcagggaattac
ggctgctccaaagagattgtaaccatcgcggccatgatgcagattcaaaatattttcgtg
gtgccatccaatcagaagaaagtggctgcacgtgagcaccggaagtttgcagttgccgaa
ggagaccacctcaccatgctgaacgtgtacgaagcttttatcaagcaccagaagagctcc
caatggtgccaggagcacttcctcaattacaagggcctcctgcgcgccatcactgtgagg
gagcagctcagacggctcatgaacaagttcaaggtaccgcggacttccagcgaaggcgac
ccagacgtgatccttaggtgcatcgttgctgggttctttgccaacgcagcccggattcac
cattcaggttcctacaggacattaagggatgaccgtgagcttcacatccacccaagttct
gtgttgtacggtgaaaaacctcccaaatgggtggtctataatgaagtggtgcagacggca
aagtactacatgcgtgacgtaactgctgtggagtccacctggttggttgagttggcccca
cacttttacaagcaagcccagcatgggtcactagccagtaagagatcccgtgttctctga
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